RNA–Protein interactions for RNA: ENST00000578397.5

PSMD11-207, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 2

Gene PSMD11, Length 1,178 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-207ENST00000578397 NISCHQ9Y2I1 1504 aa34.5■■■■□ 3.11
PSMD11-207ENST00000578397 AEBP2Q6ZN18 517 aaPredicted RBP32.18■■■□□ 2.74
PSMD11-207ENST00000578397 CCDC180Q9P1Z9 1646 aa30.8■■■□□ 2.52
PSMD11-207ENST00000578397 CHIC1Q5VXU3 224 aa30.8■■■□□ 2.52
PSMD11-207ENST00000578397 ABCC9O60706 1549 aa30.61■■■□□ 2.49
PSMD11-207ENST00000578397 RB1CC1Q8TDY2 1594 aa29.25■■■□□ 2.27
PSMD11-207ENST00000578397 NACADO15069 1562 aa29.13■■■□□ 2.25
PSMD11-207ENST00000578397 DCAF8L2P0C7V8 631 aa29.04■■■□□ 2.24
PSMD11-207ENST00000578397 MYO15BQ96JP2 1530 aa28.85■■■□□ 2.21
PSMD11-207ENST00000578397 ZCCHC6Q5VYS8 1495 aaKnown RBP28.63■■■□□ 2.17
PSMD11-207ENST00000578397 PABPN1Q86U42 306 aaKnown RBP eCLIP28.57■■■□□ 2.16
PSMD11-207ENST00000578397 DCAF1Q9Y4B6 1507 aa28.54■■■□□ 2.16
PSMD11-207ENST00000578397 DNAJC5BQ9UF47 199 aa28.54■■■□□ 2.16
PSMD11-207ENST00000578397 UNC13AQ9UPW8 1703 aa28.44■■■□□ 2.14
PSMD11-207ENST00000578397 BICRAQ9NZM4 1560 aa28.35■■■□□ 2.13
PSMD11-207ENST00000578397 SHROOM4Q9ULL8 1493 aa28.09■■■□□ 2.09
PSMD11-207ENST00000578397 SCRIBQ14160 1630 aa28.06■■■□□ 2.08
PSMD11-207ENST00000578397 EIF4G1Q04637 1599 aaKnown RBP27.65■■■□□ 2.02
PSMD11-207ENST00000578397 CC2D2AQ9P2K1 1620 aa27.63■■■□□ 2.01
PSMD11-207ENST00000578397 CECR2Q9BXF3 1484 aa27.57■■■□□ 2
PSMD11-207ENST00000578397 SENP3Q9H4L4 574 aaPredicted RBP27.44■■□□□ 1.98
PSMD11-207ENST00000578397 PHF23Q9BUL5 403 aaPredicted RBP27.14■■□□□ 1.94
PSMD11-207ENST00000578397 NCAPD3P42695 1498 aa26.93■■□□□ 1.9
PSMD11-207ENST00000578397 ATAD2BQ9ULI0 1458 aa26.85■■□□□ 1.89
PSMD11-207ENST00000578397 SMARCA4P51532 1647 aa26.82■■□□□ 1.88
PSMD11-207ENST00000578397 SMARCA2P51531 1590 aa26.78■■□□□ 1.88
PSMD11-207ENST00000578397 BAZ1AQ9NRL2 1556 aaPredicted RBP26.76■■□□□ 1.87
PSMD11-207ENST00000578397 HMGXB3Q12766 1538 aa26.7■■□□□ 1.86
PSMD11-207ENST00000578397 PEG3Q9GZU2 1588 aa26.6■■□□□ 1.85
PSMD11-207ENST00000578397 BAZ1BQ9UIG0 1483 aaKnown RBP26.59■■□□□ 1.85
PSMD11-207ENST00000578397 MROH2BQ7Z745 1585 aa26.55■■□□□ 1.84
PSMD11-207ENST00000578397 ERCC6Q03468 1493 aa26.44■■□□□ 1.82
PSMD11-207ENST00000578397 NESP48681 1621 aa26.34■■□□□ 1.81
PSMD11-207ENST00000578397 CUX2O14529 1486 aa26.34■■□□□ 1.81
PSMD11-207ENST00000578397 LAMC3Q9Y6N6 1575 aa26.23■■□□□ 1.79
PSMD11-207ENST00000578397 WIZO95785 1651 aa26.2■■□□□ 1.78
PSMD11-207ENST00000578397 RSF1Q96T23 1441 aaPredicted RBP26.14■■□□□ 1.77
PSMD11-207ENST00000578397 PDS5BQ9NTI5 1447 aa26.14■■□□□ 1.77
PSMD11-207ENST00000578397 CADPSQ9ULU8 1353 aa26.12■■□□□ 1.77
PSMD11-207ENST00000578397 DNAJC5Q9H3Z4 198 aa26.1■■□□□ 1.77
PSMD11-207ENST00000578397 THOC2Q8NI27 1593 aaKnown RBP26■■□□□ 1.75
PSMD11-207ENST00000578397 TOP2AP11388 1531 aaKnown RBP25.94■■□□□ 1.74
PSMD11-207ENST00000578397 KIF21AQ7Z4S6 1674 aa25.93■■□□□ 1.74
PSMD11-207ENST00000578397 CFTRP13569 1480 aa25.85■■□□□ 1.73
PSMD11-207ENST00000578397 MRC2Q9UBG0 1479 aa25.85■■□□□ 1.73
PSMD11-207ENST00000578397 FANCD2Q9BXW9 1451 aa25.79■■□□□ 1.72
PSMD11-207ENST00000578397 CEP164Q9UPV0 1460 aa25.79■■□□□ 1.72
PSMD11-207ENST00000578397 WDR62O43379 1518 aa25.75■■□□□ 1.71
PSMD11-207ENST00000578397 CCDC88BA6NC98 1476 aa25.66■■□□□ 1.7
PSMD11-207ENST00000578397 FOXD1Q16676 465 aa25.54■■□□□ 1.68
PSMD11-207ENST00000578397 URB2Q14146 1524 aaKnown RBP25.53■■□□□ 1.68
PSMD11-207ENST00000578397 PRDM2Q13029 1718 aa25.46■■□□□ 1.67
PSMD11-207ENST00000578397 ABCC8Q09428 1581 aa25.33■■□□□ 1.65
PSMD11-207ENST00000578397 TOPBP1Q92547 1522 aa25.31■■□□□ 1.64
PSMD11-207ENST00000578397 IFT140Q96RY7 1462 aa25.28■■□□□ 1.64
PSMD11-207ENST00000578397 DNMBPQ6XZF7 1577 aa25.22■■□□□ 1.63
PSMD11-207ENST00000578397 OSCARQ8IYS5 282 aa25.21■■□□□ 1.63
PSMD11-207ENST00000578397 ZNF608Q9ULD9 1512 aaPredicted RBP25.17■■□□□ 1.62
PSMD11-207ENST00000578397 SUPT5HO00267 1087 aaKnown RBP25.15■■□□□ 1.62
PSMD11-207ENST00000578397 POLA1P09884 1462 aaPredicted RBP25.07■■□□□ 1.6
PSMD11-207ENST00000578397 TARBP1Q13395 1621 aaKnown RBP25.03■■□□□ 1.6
PSMD11-207ENST00000578397 EIF4G3O43432 1585 aaKnown RBP25.01■■□□□ 1.59
PSMD11-207ENST00000578397 SOGA1O94964 1423 aa25■■□□□ 1.59
PSMD11-207ENST00000578397 AQRO60306 1485 aaKnown RBP eCLIP24.99■■□□□ 1.593e-6■■■■□ 24.7
PSMD11-207ENST00000578397 TRIM41Q8WV44 630 aa24.99■■□□□ 1.59
PSMD11-207ENST00000578397 RAD54L2Q9Y4B4 1467 aa24.96■■□□□ 1.59
PSMD11-207ENST00000578397 CUX1P39880 1505 aa24.94■■□□□ 1.58
PSMD11-207ENST00000578397 FGD5Q6ZNL6 1462 aa24.93■■□□□ 1.58
PSMD11-207ENST00000578397 TDRD9Q8NDG6 1382 aaKnown RBP24.9■■□□□ 1.58
PSMD11-207ENST00000578397 WDR97A6NE52 1622 aa24.85■■□□□ 1.57
PSMD11-207ENST00000578397 FBLN2P98095 1184 aa24.81■■□□□ 1.56
PSMD11-207ENST00000578397 PLPPR3Q6T4P5 718 aa24.75■■□□□ 1.55
PSMD11-207ENST00000578397 GRIN2BQ13224 1484 aa24.75■■□□□ 1.55
PSMD11-207ENST00000578397 SNAPC4Q5SXM2 1469 aa24.74■■□□□ 1.55
PSMD11-207ENST00000578397 RIMBP3CA6NJZ7 1639 aa24.73■■□□□ 1.55
PSMD11-207ENST00000578397 RIMBP3BA6NNM3 1639 aa24.73■■□□□ 1.55
PSMD11-207ENST00000578397 RIMBP3Q9UFD9 1639 aa24.73■■□□□ 1.55
PSMD11-207ENST00000578397 CHD1O14646 1710 aa24.72■■□□□ 1.55
PSMD11-207ENST00000578397 ARHGEF11O15085 1522 aa24.72■■□□□ 1.55
PSMD11-207ENST00000578397 MAGI1Q96QZ7 1491 aaPredicted RBP24.72■■□□□ 1.55
PSMD11-207ENST00000578397 CHMP7Q8WUX9 453 aaPredicted RBP24.7■■□□□ 1.54
PSMD11-207ENST00000578397 ABCA10Q8WWZ4 1543 aa24.7■■□□□ 1.54
PSMD11-207ENST00000578397 GAPVD1Q14C86 1478 aa24.68■■□□□ 1.54
PSMD11-207ENST00000578397 WRNQ14191 1432 aaPredicted RBP eCLIP24.67■■□□□ 1.54
PSMD11-207ENST00000578397 SYNJ2O15056 1496 aa24.63■■□□□ 1.53
PSMD11-207ENST00000578397 TOP2BQ02880 1626 aa24.6■■□□□ 1.53
PSMD11-207ENST00000578397 CYB5RLQ6IPT4 315 aa24.58■■□□□ 1.53
PSMD11-207ENST00000578397 ABCA5Q8WWZ7 1642 aa24.57■■□□□ 1.52
PSMD11-207ENST00000578397 BIVM-ERCC5R4GMW8 1640 aa24.57■■□□□ 1.52
PSMD11-207ENST00000578397 SYNJ1O43426 1573 aa24.56■■□□□ 1.52
PSMD11-207ENST00000578397 CLASP1Q7Z460 1538 aa24.54■■□□□ 1.52
PSMD11-207ENST00000578397 PBRM1Q86U86 1689 aa24.53■■□□□ 1.52
PSMD11-207ENST00000578397 ARAP1Q96P48 1450 aa24.5■■□□□ 1.51
PSMD11-207ENST00000578397 GRIN2AQ12879 1464 aa24.41■■□□□ 1.5
PSMD11-207ENST00000578397 FHAD1B1AJZ9 1412 aa24.4■■□□□ 1.5
PSMD11-207ENST00000578397 ERICH3Q5RHP9 1530 aa24.38■■□□□ 1.49
PSMD11-207ENST00000578397 ADAMTS12P58397 1594 aa24.37■■□□□ 1.49
PSMD11-207ENST00000578397 NUP160Q12769 1436 aa24.34■■□□□ 1.49
PSMD11-207ENST00000578397 CEP170Q5SW79 1584 aa24.26■■□□□ 1.47
PSMD11-207ENST00000578397 TRHP20396 242 aaPredicted RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms