RNA–Protein interactions for RNA: ENST00000355809.4

ZCCHC11-202, Transcript of Terminal uridylyltransferase 4, humanhuman

TSL 1 (best) BASIC

Gene ZCCHC11, Length 2,152 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC11-202ENST00000355809 NISCHQ9Y2I1 1504 aa27.18■■□□□ 1.94
ZCCHC11-202ENST00000355809 CCDC180Q9P1Z9 1646 aa24.29■■□□□ 1.48
ZCCHC11-202ENST00000355809 ABCC9O60706 1549 aa23.69■■□□□ 1.38
ZCCHC11-202ENST00000355809 RB1CC1Q8TDY2 1594 aa22.88■■□□□ 1.25
ZCCHC11-202ENST00000355809 NACADO15069 1562 aa22.84■■□□□ 1.25
ZCCHC11-202ENST00000355809 MYO15BQ96JP2 1530 aa22.71■■□□□ 1.23
ZCCHC11-202ENST00000355809 DCAF8L2P0C7V8 631 aa22.64■■□□□ 1.21
ZCCHC11-202ENST00000355809 ZCCHC6Q5VYS8 1495 aaKnown RBP22.63■■□□□ 1.21
ZCCHC11-202ENST00000355809 DCAF1Q9Y4B6 1507 aa22.57■■□□□ 1.2
ZCCHC11-202ENST00000355809 UNC13AQ9UPW8 1703 aa22.24■■□□□ 1.15
ZCCHC11-202ENST00000355809 BICRAQ9NZM4 1560 aa22.08■■□□□ 1.12
ZCCHC11-202ENST00000355809 PABPN1Q86U42 306 aaKnown RBP eCLIP22.07■■□□□ 1.12
ZCCHC11-202ENST00000355809 SHROOM4Q9ULL8 1493 aa22.05■■□□□ 1.12
ZCCHC11-202ENST00000355809 SCRIBQ14160 1630 aa22.03■■□□□ 1.12
ZCCHC11-202ENST00000355809 DNAJC5BQ9UF47 199 aa21.71■■□□□ 1.07
ZCCHC11-202ENST00000355809 EIF4G1Q04637 1599 aaKnown RBP21.54■■□□□ 1.04
ZCCHC11-202ENST00000355809 CC2D2AQ9P2K1 1620 aa21.46■■□□□ 1.03
ZCCHC11-202ENST00000355809 CECR2Q9BXF3 1484 aa21.35■■□□□ 1.01
ZCCHC11-202ENST00000355809 BAZ1AQ9NRL2 1556 aaPredicted RBP21.11■□□□□ 0.97
ZCCHC11-202ENST00000355809 SMARCA4P51532 1647 aa21.11■□□□□ 0.97
ZCCHC11-202ENST00000355809 SMARCA2P51531 1590 aa21.05■□□□□ 0.96
ZCCHC11-202ENST00000355809 NCAPD3P42695 1498 aa21.03■□□□□ 0.96
ZCCHC11-202ENST00000355809 ATAD2BQ9ULI0 1458 aa21■□□□□ 0.95
ZCCHC11-202ENST00000355809 HMGXB3Q12766 1538 aa20.96■□□□□ 0.95
ZCCHC11-202ENST00000355809 PEG3Q9GZU2 1588 aa20.94■□□□□ 0.94
ZCCHC11-202ENST00000355809 MROH2BQ7Z745 1585 aa20.88■□□□□ 0.93
ZCCHC11-202ENST00000355809 BAZ1BQ9UIG0 1483 aaKnown RBP20.86■□□□□ 0.93
ZCCHC11-202ENST00000355809 WIZO95785 1651 aa20.65■□□□□ 0.9
ZCCHC11-202ENST00000355809 RSF1Q96T23 1441 aaPredicted RBP20.63■□□□□ 0.89
ZCCHC11-202ENST00000355809 LAMC3Q9Y6N6 1575 aa20.52■□□□□ 0.88
ZCCHC11-202ENST00000355809 TOP2AP11388 1531 aaKnown RBP20.52■□□□□ 0.87
ZCCHC11-202ENST00000355809 ERCC6Q03468 1493 aa20.51■□□□□ 0.87
ZCCHC11-202ENST00000355809 NESP48681 1621 aa20.44■□□□□ 0.86
ZCCHC11-202ENST00000355809 CADPSQ9ULU8 1353 aa20.41■□□□□ 0.86
ZCCHC11-202ENST00000355809 PDS5BQ9NTI5 1447 aa20.39■□□□□ 0.86
ZCCHC11-202ENST00000355809 CUX2O14529 1486 aa20.37■□□□□ 0.85
ZCCHC11-202ENST00000355809 CFTRP13569 1480 aa20.26■□□□□ 0.83
ZCCHC11-202ENST00000355809 KIF21AQ7Z4S6 1674 aa20.25■□□□□ 0.83
ZCCHC11-202ENST00000355809 THOC2Q8NI27 1593 aaKnown RBP20.23■□□□□ 0.83
ZCCHC11-202ENST00000355809 CCDC88BA6NC98 1476 aa20.21■□□□□ 0.83
ZCCHC11-202ENST00000355809 CEP164Q9UPV0 1460 aa20.18■□□□□ 0.82
ZCCHC11-202ENST00000355809 MRC2Q9UBG0 1479 aa20.17■□□□□ 0.82
ZCCHC11-202ENST00000355809 FANCD2Q9BXW9 1451 aa20.16■□□□□ 0.82
ZCCHC11-202ENST00000355809 PRDM2Q13029 1718 aa20.16■□□□□ 0.82
ZCCHC11-202ENST00000355809 WDR62O43379 1518 aa20.09■□□□□ 0.81
ZCCHC11-202ENST00000355809 SUPT5HO00267 1087 aaKnown RBP19.99■□□□□ 0.79
ZCCHC11-202ENST00000355809 ABCC8Q09428 1581 aa19.93■□□□□ 0.78
ZCCHC11-202ENST00000355809 URB2Q14146 1524 aaKnown RBP19.93■□□□□ 0.78
ZCCHC11-202ENST00000355809 DNMBPQ6XZF7 1577 aa19.84■□□□□ 0.77
ZCCHC11-202ENST00000355809 TOPBP1Q92547 1522 aa19.82■□□□□ 0.76
ZCCHC11-202ENST00000355809 IFT140Q96RY7 1462 aa19.78■□□□□ 0.76
ZCCHC11-202ENST00000355809 DNAJC5Q9H3Z4 198 aa19.74■□□□□ 0.75
ZCCHC11-202ENST00000355809 POLA1P09884 1462 aaPredicted RBP19.64■□□□□ 0.73
ZCCHC11-202ENST00000355809 CUX1P39880 1505 aa19.61■□□□□ 0.73
ZCCHC11-202ENST00000355809 TARBP1Q13395 1621 aaKnown RBP19.6■□□□□ 0.73
ZCCHC11-202ENST00000355809 WDR97A6NE52 1622 aa19.59■□□□□ 0.73
ZCCHC11-202ENST00000355809 FGD5Q6ZNL6 1462 aa19.58■□□□□ 0.72
ZCCHC11-202ENST00000355809 SOGA1O94964 1423 aa19.57■□□□□ 0.72
ZCCHC11-202ENST00000355809 ZNF608Q9ULD9 1512 aaPredicted RBP19.57■□□□□ 0.72
ZCCHC11-202ENST00000355809 EIF4G3O43432 1585 aaKnown RBP19.56■□□□□ 0.72
ZCCHC11-202ENST00000355809 RAD54L2Q9Y4B4 1467 aa19.5■□□□□ 0.71
ZCCHC11-202ENST00000355809 WRNQ14191 1432 aaPredicted RBP eCLIP19.5■□□□□ 0.71
ZCCHC11-202ENST00000355809 BIVM-ERCC5R4GMW8 1640 aa19.48■□□□□ 0.71
ZCCHC11-202ENST00000355809 TOP2BQ02880 1626 aa19.47■□□□□ 0.71
ZCCHC11-202ENST00000355809 AQRO60306 1485 aaKnown RBP eCLIP19.46■□□□□ 0.711e-8■■■■■ 34.3
ZCCHC11-202ENST00000355809 OSCARQ8IYS5 282 aa19.45■□□□□ 0.7
ZCCHC11-202ENST00000355809 ABCA10Q8WWZ4 1543 aa19.43■□□□□ 0.7
ZCCHC11-202ENST00000355809 TDRD9Q8NDG6 1382 aaKnown RBP19.41■□□□□ 0.7
ZCCHC11-202ENST00000355809 SYNJ1O43426 1573 aa19.4■□□□□ 0.7
ZCCHC11-202ENST00000355809 GRIN2BQ13224 1484 aa19.39■□□□□ 0.69
ZCCHC11-202ENST00000355809 MAGI1Q96QZ7 1491 aaPredicted RBP19.37■□□□□ 0.69
ZCCHC11-202ENST00000355809 GAPVD1Q14C86 1478 aa19.36■□□□□ 0.69
ZCCHC11-202ENST00000355809 ABCA5Q8WWZ7 1642 aa19.34■□□□□ 0.69
ZCCHC11-202ENST00000355809 SNAPC4Q5SXM2 1469 aa19.33■□□□□ 0.69
ZCCHC11-202ENST00000355809 PBRM1Q86U86 1689 aa19.32■□□□□ 0.68
ZCCHC11-202ENST00000355809 CHD1O14646 1710 aa19.31■□□□□ 0.68
ZCCHC11-202ENST00000355809 SYNJ2O15056 1496 aa19.27■□□□□ 0.68
ZCCHC11-202ENST00000355809 FBLN2P98095 1184 aa19.26■□□□□ 0.67
ZCCHC11-202ENST00000355809 CHMP7Q8WUX9 453 aaPredicted RBP19.25■□□□□ 0.67
ZCCHC11-202ENST00000355809 ERICH3Q5RHP9 1530 aa19.22■□□□□ 0.67
ZCCHC11-202ENST00000355809 ADAMTS12P58397 1594 aa19.17■□□□□ 0.66
ZCCHC11-202ENST00000355809 FHAD1B1AJZ9 1412 aa19.16■□□□□ 0.66
ZCCHC11-202ENST00000355809 KIF27Q86VH2 1401 aa19.13■□□□□ 0.65
ZCCHC11-202ENST00000355809 CLASP1Q7Z460 1538 aa19.13■□□□□ 0.65
ZCCHC11-202ENST00000355809 RIMBP3CA6NJZ7 1639 aa19.12■□□□□ 0.65
ZCCHC11-202ENST00000355809 RIMBP3BA6NNM3 1639 aa19.12■□□□□ 0.65
ZCCHC11-202ENST00000355809 RIMBP3Q9UFD9 1639 aa19.12■□□□□ 0.65
ZCCHC11-202ENST00000355809 ARHGEF11O15085 1522 aa19.11■□□□□ 0.65
ZCCHC11-202ENST00000355809 GRIN2AQ12879 1464 aa19.11■□□□□ 0.65
ZCCHC11-202ENST00000355809 CUL7Q14999 1698 aa19.05■□□□□ 0.64
ZCCHC11-202ENST00000355809 NUP160Q12769 1436 aa19.04■□□□□ 0.64
ZCCHC11-202ENST00000355809 TRIM41Q8WV44 630 aa19.02■□□□□ 0.63
ZCCHC11-202ENST00000355809 IGF1RP08069 1367 aa19■□□□□ 0.63
ZCCHC11-202ENST00000355809 CEP170Q5SW79 1584 aa18.99■□□□□ 0.63
ZCCHC11-202ENST00000355809 ARAP1Q96P48 1450 aa18.94■□□□□ 0.62
ZCCHC11-202ENST00000355809 CARMIL1Q5VZK9 1371 aa18.91■□□□□ 0.62
ZCCHC11-202ENST00000355809 SHROOM2Q13796 1616 aa18.91■□□□□ 0.62
ZCCHC11-202ENST00000355809 CYB5RLQ6IPT4 315 aa18.89■□□□□ 0.62
ZCCHC11-202ENST00000355809 RUSC2Q8N2Y8 1516 aa18.88■□□□□ 0.61
ZCCHC11-202ENST00000355809 KIAA0586Q9BVV6 1533 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms