RNA–Protein interactions for RNA: ENST00000468703.3

USP34-209, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 5

Gene USP34, Length 228 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-209ENST00000468703 AEBP2Q6ZN18 517 aaPredicted RBP20.29■□□□□ 0.84
USP34-209ENST00000468703 CHIC1Q5VXU3 224 aa19.58■□□□□ 0.72
USP34-209ENST00000468703 SENP3Q9H4L4 574 aaPredicted RBP17.29■□□□□ 0.36
USP34-209ENST00000468703 PHF23Q9BUL5 403 aaPredicted RBP17.17■□□□□ 0.34
USP34-209ENST00000468703 POTEDQ86YR6 584 aa17.04■□□□□ 0.32
USP34-209ENST00000468703 FOXD1Q16676 465 aa16.05■□□□□ 0.16
USP34-209ENST00000468703 PLPPR3Q6T4P5 718 aa15.78■□□□□ 0.12
USP34-209ENST00000468703 PPP6R1Q9UPN7 881 aa15.22■□□□□ 0.03
USP34-209ENST00000468703 ADRA2BP18089 450 aa15.19■□□□□ 0.02
USP34-209ENST00000468703 PIAS4Q8N2W9 510 aaPredicted RBP15.07■□□□□ 0
USP34-209ENST00000468703 MSH5O43196 834 aa14.93□□□□□ -0.02
USP34-209ENST00000468703 SCAF1Q9H7N4 1312 aaKnown RBP13.93□□□□□ -0.18
USP34-209ENST00000468703 PPP4R3CPQ6ZMV5 832 aa13.86□□□□□ -0.19
USP34-209ENST00000468703 MAPK8IP2Q13387 824 aaPredicted RBP13.85□□□□□ -0.19
USP34-209ENST00000468703 DMRT2Q9Y5R5 561 aa13.76□□□□□ -0.21
USP34-209ENST00000468703 CNKSR2Q8WXI2 1034 aa13.55□□□□□ -0.24
USP34-209ENST00000468703 NCBP3Q53F19 620 aaKnown RBP13.43□□□□□ -0.26
USP34-209ENST00000468703 HOXD11P31277 338 aaPredicted RBP13.37□□□□□ -0.27
USP34-209ENST00000468703 CACNB1Q02641 598 aaPredicted RBP13.36□□□□□ -0.27
USP34-209ENST00000468703 RNF216Q9NWF9 866 aaPredicted RBP13.35□□□□□ -0.27
USP34-209ENST00000468703 KCNA4P22459 653 aa13.23□□□□□ -0.29
USP34-209ENST00000468703 NPM3O75607 178 aaKnown RBP13.22□□□□□ -0.29
USP34-209ENST00000468703 DCAF8L1A6NGE4 600 aa13.12□□□□□ -0.31
USP34-209ENST00000468703 POTEHQ6S545 545 aa12.98□□□□□ -0.33
USP34-209ENST00000468703 DNAJC5BQ9UF47 199 aa12.94□□□□□ -0.34
USP34-209ENST00000468703 RNF39Q9H2S5 420 aa12.76□□□□□ -0.37
USP34-209ENST00000468703 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.71□□□□□ -0.37
USP34-209ENST00000468703 C1QBPQ07021 282 aaKnown RBP12.6□□□□□ -0.39
USP34-209ENST00000468703 SLC4A1APQ9BWU0 796 aaKnown RBP12.56□□□□□ -0.4
USP34-209ENST00000468703 SLC4A2P04920 1241 aa12.55□□□□□ -0.4
USP34-209ENST00000468703 U3KPZ7 1027 aaPredicted RBP12.5□□□□□ -0.41
USP34-209ENST00000468703 FOXD4L1Q9NU39 408 aa12.27□□□□□ -0.45
USP34-209ENST00000468703 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.26□□□□□ -0.45
USP34-209ENST00000468703 HNRNPUL2Q1KMD3 747 aaKnown RBP12.26□□□□□ -0.45
USP34-209ENST00000468703 MYCNP04198 464 aaPredicted RBP12.25□□□□□ -0.45
USP34-209ENST00000468703 APLP2Q06481 763 aa12.21□□□□□ -0.45
USP34-209ENST00000468703 SAMD1Q6SPF0 538 aaPredicted RBP12.2□□□□□ -0.46
USP34-209ENST00000468703 SPINK5Q9NQ38 1064 aaPredicted RBP12.2□□□□□ -0.46
USP34-209ENST00000468703 ZBTB22O15209 634 aa12.17□□□□□ -0.46
USP34-209ENST00000468703 CAPN15O75808 1086 aa12.16□□□□□ -0.46
USP34-209ENST00000468703 ZNF219Q9P2Y4 722 aaPredicted RBP12.06□□□□□ -0.48
USP34-209ENST00000468703 TRHP20396 242 aaPredicted RBP12.04□□□□□ -0.48
USP34-209ENST00000468703 DSG3P32926 999 aa12.04□□□□□ -0.48
USP34-209ENST00000468703 ABCB7O75027 752 aa11.9□□□□□ -0.5
USP34-209ENST00000468703 ATF5Q9Y2D1 282 aaPredicted RBP11.9□□□□□ -0.5
USP34-209ENST00000468703 ATXN8OSP0DMR3 200 aa11.89□□□□□ -0.51
USP34-209ENST00000468703 CSRNP3Q8WYN3 585 aa11.88□□□□□ -0.51
USP34-209ENST00000468703 EHMT2Q96KQ7 1210 aa11.86□□□□□ -0.51
USP34-209ENST00000468703 POLA2Q14181 598 aa11.79□□□□□ -0.52
USP34-209ENST00000468703 ZBTB12Q9Y330 459 aaPredicted RBP11.62□□□□□ -0.55
USP34-209ENST00000468703 RBM42Q9BTD8 480 aaKnown RBP11.51□□□□□ -0.57
USP34-209ENST00000468703 FBLN2P98095 1184 aa11.44□□□□□ -0.58
USP34-209ENST00000468703 OSCARQ8IYS5 282 aa11.41□□□□□ -0.58
USP34-209ENST00000468703 PLSCR2Q9NRY7 297 aa11.39□□□□□ -0.59
USP34-209ENST00000468703 MKRN4PQ13434 485 aaPredicted RBP11.38□□□□□ -0.59
USP34-209ENST00000468703 SP7Q8TDD2 431 aaPredicted RBP11.35□□□□□ -0.59
USP34-209ENST00000468703 AKT1S1Q96B36 256 aa11.3□□□□□ -0.6
USP34-209ENST00000468703 SPDYE2BA6NHP3 402 aa11.28□□□□□ -0.6
USP34-209ENST00000468703 SPDYE6P0CI01 402 aa11.28□□□□□ -0.6
USP34-209ENST00000468703 SPDYE2Q495Y8 402 aa11.28□□□□□ -0.6
USP34-209ENST00000468703 REM2Q8IYK8 340 aaPredicted RBP11.17□□□□□ -0.62
USP34-209ENST00000468703 ZNF692Q9BU19 519 aaPredicted RBP11.16□□□□□ -0.62
USP34-209ENST00000468703 SSUH2Q9Y2M2 353 aa11.16□□□□□ -0.62
USP34-209ENST00000468703 CHRDL2Q6WN34 429 aa11.11□□□□□ -0.63
USP34-209ENST00000468703 PITPNM1O00562 1244 aa11.05□□□□□ -0.64
USP34-209ENST00000468703 PABPN1Q86U42 306 aaKnown RBP eCLIP11.01□□□□□ -0.65
USP34-209ENST00000468703 SPDYE4A6NLX3 237 aa11□□□□□ -0.65
USP34-209ENST00000468703 SPDYE1Q8NFV5 336 aaPredicted RBP11□□□□□ -0.65
USP34-209ENST00000468703 CLEC11AQ9Y240 323 aa10.93□□□□□ -0.66
USP34-209ENST00000468703 PIP4P2Q8N4L2 257 aa10.91□□□□□ -0.66
USP34-209ENST00000468703 FXR2P51116 673 aaKnown RBP eCLIP10.9□□□□□ -0.665e-16■■■■□ 21.6
USP34-209ENST00000468703 PRR29P0C7W0 189 aa10.81□□□□□ -0.68
USP34-209ENST00000468703 PROM2Q8N271 834 aa10.81□□□□□ -0.68
USP34-209ENST00000468703 STAG3Q9UJ98 1225 aa10.79□□□□□ -0.68
USP34-209ENST00000468703 PRKAR2AP13861 404 aaKnown RBP10.76□□□□□ -0.69
USP34-209ENST00000468703 FKBP8Q14318 412 aa10.75□□□□□ -0.69
USP34-209ENST00000468703 CHADLQ6NUI6 762 aa10.69□□□□□ -0.7
USP34-209ENST00000468703 CREBZFQ9NS37 354 aa10.62□□□□□ -0.71
USP34-209ENST00000468703 HAX1O00165 279 aa10.61□□□□□ -0.71
USP34-209ENST00000468703 LHX8Q68G74 356 aa10.6□□□□□ -0.71
USP34-209ENST00000468703 FARP1Q9Y4F1 1045 aaPredicted RBP10.59□□□□□ -0.71
USP34-209ENST00000468703 C19orf67A6NJJ6 358 aa10.55□□□□□ -0.72
USP34-209ENST00000468703 EVX2Q03828 476 aa10.5□□□□□ -0.73
USP34-209ENST00000468703 MNX1P50219 401 aaPredicted RBP10.48□□□□□ -0.73
USP34-209ENST00000468703 FBXO3Q9UK99 471 aa10.47□□□□□ -0.73
USP34-209ENST00000468703 CD44P16070 742 aaKnown RBP10.45□□□□□ -0.74
USP34-209ENST00000468703 NPM1P06748 294 aaKnown RBP eCLIP10.44□□□□□ -0.74
USP34-209ENST00000468703 MIER1Q8N108 512 aa10.44□□□□□ -0.74
USP34-209ENST00000468703 PLEKHG5O94827 1062 aa10.43□□□□□ -0.74
USP34-209ENST00000468703 PLCD3Q8N3E9 789 aa10.41□□□□□ -0.74
USP34-209ENST00000468703 ZBTB47Q9UFB7 747 aaPredicted RBP10.34□□□□□ -0.75
USP34-209ENST00000468703 PAK3O75914 559 aaPredicted RBP10.33□□□□□ -0.76
USP34-209ENST00000468703 VASPP50552 380 aaPredicted RBP10.33□□□□□ -0.76
USP34-209ENST00000468703 ZRANB1Q9UGI0 708 aa10.33□□□□□ -0.76
USP34-209ENST00000468703 ZNF579Q8NAF0 562 aaKnown RBP10.32□□□□□ -0.76
USP34-209ENST00000468703 GABBR2O75899 941 aa10.3□□□□□ -0.76
USP34-209ENST00000468703 CLCN6P51797 869 aa10.29□□□□□ -0.76
USP34-209ENST00000468703 RASEFQ8IZ41 740 aa10.24□□□□□ -0.77
USP34-209ENST00000468703 NUBP1P53384 320 aa10.23□□□□□ -0.77
USP34-209ENST00000468703 TSPYL2Q9H2G4 693 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms