RNA–Protein interactions for RNA: ENST00000273261.7

LRIG1-201, Transcript of leucine rich repeats and immunoglobulin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRIG1, Length 5,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIG1-201ENST00000273261 DCAF8L2P0C7V8 631 aa35.41■■■■□ 3.26
LRIG1-201ENST00000273261 NISCHQ9Y2I1 1504 aa35.28■■■■□ 3.24
LRIG1-201ENST00000273261 SUPT5HO00267 1087 aaKnown RBP33.75■■■□□ 2.99
LRIG1-201ENST00000273261 SHROOM4Q9ULL8 1493 aa33.29■■■□□ 2.92
LRIG1-201ENST00000273261 EHMT2Q96KQ7 1210 aa32.14■■■□□ 2.74
LRIG1-201ENST00000273261 APLP2Q06481 763 aa32.04■■■□□ 2.72
LRIG1-201ENST00000273261 FAM9AQ8IZU1 332 aaPredicted RBP31.69■■■□□ 2.66
LRIG1-201ENST00000273261 PELP1Q8IZL8 1130 aaKnown RBP31.52■■■□□ 2.64
LRIG1-201ENST00000273261 TRIM41Q8WV44 630 aa31.48■■■□□ 2.63
LRIG1-201ENST00000273261 PCGF6Q9BYE7 350 aa31.33■■■□□ 2.61
LRIG1-201ENST00000273261 ZEB1P37275 1124 aaPredicted RBP31.17■■■□□ 2.58
LRIG1-201ENST00000273261 TTBK1Q5TCY1 1321 aaPredicted RBP31.1■■■□□ 2.57
LRIG1-201ENST00000273261 UBTFP17480 764 aaKnown RBP30.96■■■□□ 2.55
LRIG1-201ENST00000273261 RANGAP1P46060 587 aaPredicted RBP30.91■■■□□ 2.54
LRIG1-201ENST00000273261 CCER1Q8TC90 406 aaPredicted RBP30.84■■■□□ 2.53
LRIG1-201ENST00000273261 ATP1B4Q9UN42 357 aaPredicted RBP30.73■■■□□ 2.51
LRIG1-201ENST00000273261 CENPBP07199 599 aaPredicted RBP30.68■■■□□ 2.5
LRIG1-201ENST00000273261 TRIM26Q12899 539 aaPredicted RBP30.39■■■□□ 2.46
LRIG1-201ENST00000273261 CHIC1Q5VXU3 224 aa30.33■■■□□ 2.45
LRIG1-201ENST00000273261 MYT1Q01538 1121 aa30.18■■■□□ 2.42
LRIG1-201ENST00000273261 PPARGC1BQ86YN6 1023 aaKnown RBP30.09■■■□□ 2.41
LRIG1-201ENST00000273261 ABCC9O60706 1549 aa29.99■■■□□ 2.39
LRIG1-201ENST00000273261 LOC105371045A0A1W2PR82 267 aa29.98■■■□□ 2.39
LRIG1-201ENST00000273261 NEFLP07196 543 aa29.96■■■□□ 2.39
LRIG1-201ENST00000273261 ERICH6Q7L0X2 663 aa29.93■■■□□ 2.38
LRIG1-201ENST00000273261 HRCP23327 699 aa29.91■■■□□ 2.38
LRIG1-201ENST00000273261 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.76■■■□□ 2.36
LRIG1-201ENST00000273261 HNRNPUL2Q1KMD3 747 aaKnown RBP29.76■■■□□ 2.36
LRIG1-201ENST00000273261 YTHDC1Q96MU7 727 aaKnown RBP29.76■■■□□ 2.35
LRIG1-201ENST00000273261 ITGAEP38570 1179 aa29.72■■■□□ 2.35
LRIG1-201ENST00000273261 PABPN1Q86U42 306 aaKnown RBP eCLIP29.64■■■□□ 2.34
LRIG1-201ENST00000273261 MYT1LQ9UL68 1186 aa29.5■■■□□ 2.31
LRIG1-201ENST00000273261 ZCCHC6Q5VYS8 1495 aaKnown RBP29.27■■■□□ 2.28
LRIG1-201ENST00000273261 POLR3GLQ9BT43 218 aa29.26■■■□□ 2.27
LRIG1-201ENST00000273261 FAM50AQ14320 339 aaKnown RBP29.19■■■□□ 2.26
LRIG1-201ENST00000273261 CCDC180Q9P1Z9 1646 aa29.13■■■□□ 2.25
LRIG1-201ENST00000273261 DIEXFQ68CQ4 756 aaKnown RBP29.06■■■□□ 2.24
LRIG1-201ENST00000273261 CSRNP3Q8WYN3 585 aa29.01■■■□□ 2.23
LRIG1-201ENST00000273261 SCRIBQ14160 1630 aa28.99■■■□□ 2.23
LRIG1-201ENST00000273261 TRIM52Q96A61 297 aa28.97■■■□□ 2.23
LRIG1-201ENST00000273261 DAXXQ9UER7 740 aaPredicted RBP28.89■■■□□ 2.21
LRIG1-201ENST00000273261 CNGB1Q14028 1251 aaPredicted RBP28.78■■■□□ 2.2
LRIG1-201ENST00000273261 NEUROD1Q13562 356 aa28.78■■■□□ 2.2
LRIG1-201ENST00000273261 FBLN2P98095 1184 aa28.71■■■□□ 2.19
LRIG1-201ENST00000273261 SLC4A1APQ9BWU0 796 aaKnown RBP28.71■■■□□ 2.19
LRIG1-201ENST00000273261 ANP32CO43423 234 aa28.6■■■□□ 2.17
LRIG1-201ENST00000273261 ZNF316A6NFI3 1004 aaPredicted RBP28.58■■■□□ 2.17
LRIG1-201ENST00000273261 CDK11AQ9UQ88 783 aaPredicted RBP28.55■■■□□ 2.16
LRIG1-201ENST00000273261 P3H3Q8IVL6 736 aa28.54■■■□□ 2.16
LRIG1-201ENST00000273261 DCAF1Q9Y4B6 1507 aa28.54■■■□□ 2.16
LRIG1-201ENST00000273261 RB1CC1Q8TDY2 1594 aa28.47■■■□□ 2.15
LRIG1-201ENST00000273261 ZNF326Q5BKZ1 582 aaKnown RBP28.46■■■□□ 2.15
LRIG1-201ENST00000273261 CLSPNQ9HAW4 1339 aa28.35■■■□□ 2.13
LRIG1-201ENST00000273261 NACADO15069 1562 aa28.29■■■□□ 2.12
LRIG1-201ENST00000273261 ARID3CA6NKF2 412 aa28.28■■■□□ 2.12
LRIG1-201ENST00000273261 ZNF777Q9ULD5 760 aaPredicted RBP28.24■■■□□ 2.11
LRIG1-201ENST00000273261 GTF3C3Q9Y5Q9 886 aa28.2■■■□□ 2.11
LRIG1-201ENST00000273261 RTL5Q5HYW3 569 aaPredicted RBP28.2■■■□□ 2.11
LRIG1-201ENST00000273261 RSF1Q96T23 1441 aaPredicted RBP28.19■■■□□ 2.1
LRIG1-201ENST00000273261 EEA1Q15075 1411 aa28.18■■■□□ 2.1
LRIG1-201ENST00000273261 TONSLQ96HA7 1378 aa28.14■■■□□ 2.09
LRIG1-201ENST00000273261 CLIP1P30622 1438 aa28.04■■■□□ 2.08
LRIG1-201ENST00000273261 BCANQ96GW7 911 aa28.04■■■□□ 2.08
LRIG1-201ENST00000273261 NEFMP07197 916 aa28.02■■■□□ 2.08
LRIG1-201ENST00000273261 ACIN1Q9UKV3 1341 aaKnown RBP28.01■■■□□ 2.07
LRIG1-201ENST00000273261 ZBTB47Q9UFB7 747 aaPredicted RBP27.98■■■□□ 2.07
LRIG1-201ENST00000273261 GOLGA3Q08378 1498 aa27.97■■■□□ 2.07
LRIG1-201ENST00000273261 MTUS2Q5JR59 1369 aa27.94■■■□□ 2.06
LRIG1-201ENST00000273261 NPM1P06748 294 aaKnown RBP eCLIP27.92■■■□□ 2.06
LRIG1-201ENST00000273261 BAZ1BQ9UIG0 1483 aaKnown RBP27.91■■■□□ 2.06
LRIG1-201ENST00000273261 CANXP27824 592 aaKnown RBP27.91■■■□□ 2.06
LRIG1-201ENST00000273261 WRNQ14191 1432 aaPredicted RBP eCLIP27.9■■■□□ 2.06
LRIG1-201ENST00000273261 ESF1Q9H501 851 aaKnown RBP27.83■■■□□ 2.05
LRIG1-201ENST00000273261 BAZ1AQ9NRL2 1556 aaPredicted RBP27.83■■■□□ 2.05
LRIG1-201ENST00000273261 CHMP7Q8WUX9 453 aaPredicted RBP27.81■■■□□ 2.04
LRIG1-201ENST00000273261 TSPY4P0CV99 314 aa27.81■■■□□ 2.04
LRIG1-201ENST00000273261 TSPY10P0CW01 314 aa27.81■■■□□ 2.04
LRIG1-201ENST00000273261 CEP162Q5TB80 1403 aa27.81■■■□□ 2.04
LRIG1-201ENST00000273261 CHIC2Q9UKJ5 165 aa27.77■■■□□ 2.04
LRIG1-201ENST00000273261 KIF27Q86VH2 1401 aa27.75■■■□□ 2.03
LRIG1-201ENST00000273261 TNIKQ9UKE5 1360 aa27.73■■■□□ 2.03
LRIG1-201ENST00000273261 CEP164Q9UPV0 1460 aa27.73■■■□□ 2.03
LRIG1-201ENST00000273261 MYO15BQ96JP2 1530 aa27.71■■■□□ 2.03
LRIG1-201ENST00000273261 DDX10Q13206 875 aaKnown RBP27.7■■■□□ 2.02
LRIG1-201ENST00000273261 CHGAP10645 457 aaKnown RBP27.69■■■□□ 2.02
LRIG1-201ENST00000273261 STAG3Q9UJ98 1225 aa27.68■■■□□ 2.02
LRIG1-201ENST00000273261 HNRNPUQ00839 825 aaKnown RBP eCLIP27.62■■■□□ 2.01
LRIG1-201ENST00000273261 SLC24A1O60721 1099 aa27.6■■■□□ 2.01
LRIG1-201ENST00000273261 ANP32AP39687 249 aaKnown RBP27.59■■■□□ 2.01
LRIG1-201ENST00000273261 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.59■■■□□ 2.01
LRIG1-201ENST00000273261 PLEKHD1A6NEE1 506 aa27.52■■■□□ 2
LRIG1-201ENST00000273261 FKBP8Q14318 412 aa27.52■■■□□ 2
LRIG1-201ENST00000273261 FAM9BQ8IZU0 186 aa27.52■■■□□ 2
LRIG1-201ENST00000273261 TMC1Q8TDI8 760 aa27.51■■□□□ 1.99
LRIG1-201ENST00000273261 CECR2Q9BXF3 1484 aa27.49■■□□□ 1.99
LRIG1-201ENST00000273261 EIF4G2P78344 907 aaKnown RBP eCLIP27.47■■□□□ 1.99
LRIG1-201ENST00000273261 RRP7BPQ9NSQ0 103 aa27.44■■□□□ 1.98
LRIG1-201ENST00000273261 KDM2AQ9Y2K7 1162 aa27.4■■□□□ 1.98
LRIG1-201ENST00000273261 MRS2Q9HD23 443 aa27.4■■□□□ 1.98
LRIG1-201ENST00000273261 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms