RNA–Protein interactions for RNA: ENST00000579451.1

PSMD11-208, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 2

Gene PSMD11, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-208ENST00000579451 NISCHQ9Y2I1 1504 aa38.21■■■■□ 3.71
PSMD11-208ENST00000579451 CCDC180Q9P1Z9 1646 aa34.41■■■■□ 3.1
PSMD11-208ENST00000579451 ABCC9O60706 1549 aa34.3■■■■□ 3.08
PSMD11-208ENST00000579451 RB1CC1Q8TDY2 1594 aa32.7■■■□□ 2.83
PSMD11-208ENST00000579451 NACADO15069 1562 aa32.47■■■□□ 2.79
PSMD11-208ENST00000579451 DCAF8L2P0C7V8 631 aa32.17■■■□□ 2.74
PSMD11-208ENST00000579451 DNAJC5BQ9UF47 199 aa32.17■■■□□ 2.74
PSMD11-208ENST00000579451 UNC13AQ9UPW8 1703 aa32.1■■■□□ 2.73
PSMD11-208ENST00000579451 MYO15BQ96JP2 1530 aa32.01■■■□□ 2.72
PSMD11-208ENST00000579451 PABPN1Q86U42 306 aaKnown RBP eCLIP31.88■■■□□ 2.69
PSMD11-208ENST00000579451 BICRAQ9NZM4 1560 aa31.76■■■□□ 2.67
PSMD11-208ENST00000579451 ZCCHC6Q5VYS8 1495 aaKnown RBP31.66■■■□□ 2.66
PSMD11-208ENST00000579451 DCAF1Q9Y4B6 1507 aa31.59■■■□□ 2.65
PSMD11-208ENST00000579451 SHROOM4Q9ULL8 1493 aa31.32■■■□□ 2.6
PSMD11-208ENST00000579451 SCRIBQ14160 1630 aa31.27■■■□□ 2.6
PSMD11-208ENST00000579451 CC2D2AQ9P2K1 1620 aa31.06■■■□□ 2.56
PSMD11-208ENST00000579451 EIF4G1Q04637 1599 aaKnown RBP30.96■■■□□ 2.55
PSMD11-208ENST00000579451 CECR2Q9BXF3 1484 aa30.9■■■□□ 2.54
PSMD11-208ENST00000579451 NCAPD3P42695 1498 aa29.93■■■□□ 2.38
PSMD11-208ENST00000579451 SMARCA4P51532 1647 aa29.85■■■□□ 2.37
PSMD11-208ENST00000579451 ATAD2BQ9ULI0 1458 aa29.83■■■□□ 2.37
PSMD11-208ENST00000579451 SMARCA2P51531 1590 aa29.78■■■□□ 2.36
PSMD11-208ENST00000579451 HMGXB3Q12766 1538 aa29.76■■■□□ 2.35
PSMD11-208ENST00000579451 BAZ1AQ9NRL2 1556 aaPredicted RBP29.69■■■□□ 2.34
PSMD11-208ENST00000579451 CUX2O14529 1486 aa29.61■■■□□ 2.33
PSMD11-208ENST00000579451 ERCC6Q03468 1493 aa29.61■■■□□ 2.33
PSMD11-208ENST00000579451 DNAJC5Q9H3Z4 198 aa29.58■■■□□ 2.33
PSMD11-208ENST00000579451 PEG3Q9GZU2 1588 aa29.57■■■□□ 2.32
PSMD11-208ENST00000579451 BAZ1BQ9UIG0 1483 aaKnown RBP29.55■■■□□ 2.32
PSMD11-208ENST00000579451 NESP48681 1621 aa29.46■■■□□ 2.31
PSMD11-208ENST00000579451 MROH2BQ7Z745 1585 aa29.43■■■□□ 2.3
PSMD11-208ENST00000579451 LAMC3Q9Y6N6 1575 aa29.32■■■□□ 2.28
PSMD11-208ENST00000579451 THOC2Q8NI27 1593 aaKnown RBP29.25■■■□□ 2.27
PSMD11-208ENST00000579451 KIF21AQ7Z4S6 1674 aa29.2■■■□□ 2.26
PSMD11-208ENST00000579451 WIZO95785 1651 aa29.13■■■□□ 2.25
PSMD11-208ENST00000579451 PDS5BQ9NTI5 1447 aa29.09■■■□□ 2.25
PSMD11-208ENST00000579451 CADPSQ9ULU8 1353 aa29.01■■■□□ 2.23
PSMD11-208ENST00000579451 MRC2Q9UBG0 1479 aa28.85■■■□□ 2.21
PSMD11-208ENST00000579451 WDR62O43379 1518 aa28.81■■■□□ 2.2
PSMD11-208ENST00000579451 RSF1Q96T23 1441 aaPredicted RBP28.78■■■□□ 2.2
PSMD11-208ENST00000579451 CEP164Q9UPV0 1460 aa28.73■■■□□ 2.19
PSMD11-208ENST00000579451 TOP2AP11388 1531 aaKnown RBP28.73■■■□□ 2.19
PSMD11-208ENST00000579451 FANCD2Q9BXW9 1451 aa28.69■■■□□ 2.18
PSMD11-208ENST00000579451 CFTRP13569 1480 aa28.68■■■□□ 2.18
PSMD11-208ENST00000579451 PRDM2Q13029 1718 aa28.58■■■□□ 2.17
PSMD11-208ENST00000579451 URB2Q14146 1524 aaKnown RBP28.46■■■□□ 2.15
PSMD11-208ENST00000579451 CCDC88BA6NC98 1476 aa28.37■■■□□ 2.13
PSMD11-208ENST00000579451 TRIM41Q8WV44 630 aa28.24■■■□□ 2.11
PSMD11-208ENST00000579451 OSCARQ8IYS5 282 aa28.2■■■□□ 2.1
PSMD11-208ENST00000579451 TOPBP1Q92547 1522 aa28.16■■■□□ 2.1
PSMD11-208ENST00000579451 IFT140Q96RY7 1462 aa28.15■■■□□ 2.1
PSMD11-208ENST00000579451 ABCC8Q09428 1581 aa28.11■■■□□ 2.09
PSMD11-208ENST00000579451 ZNF608Q9ULD9 1512 aaPredicted RBP28.1■■■□□ 2.09
PSMD11-208ENST00000579451 DNMBPQ6XZF7 1577 aa28.08■■■□□ 2.09
PSMD11-208ENST00000579451 EIF4G3O43432 1585 aaKnown RBP28.01■■■□□ 2.07
PSMD11-208ENST00000579451 TARBP1Q13395 1621 aaKnown RBP27.96■■■□□ 2.07
PSMD11-208ENST00000579451 RIMBP3CA6NJZ7 1639 aa27.93■■■□□ 2.06
PSMD11-208ENST00000579451 RIMBP3BA6NNM3 1639 aa27.93■■■□□ 2.06
PSMD11-208ENST00000579451 RIMBP3Q9UFD9 1639 aa27.93■■■□□ 2.06
PSMD11-208ENST00000579451 CHD1O14646 1710 aa27.87■■■□□ 2.05
PSMD11-208ENST00000579451 POLA1P09884 1462 aaPredicted RBP27.86■■■□□ 2.05
PSMD11-208ENST00000579451 AQRO60306 1485 aaKnown RBP eCLIP27.83■■■□□ 2.053e-6■■■■□ 24.7
PSMD11-208ENST00000579451 ARHGEF11O15085 1522 aa27.79■■■□□ 2.04
PSMD11-208ENST00000579451 RAD54L2Q9Y4B4 1467 aa27.74■■■□□ 2.03
PSMD11-208ENST00000579451 SOGA1O94964 1423 aa27.71■■■□□ 2.03
PSMD11-208ENST00000579451 WDR97A6NE52 1622 aa27.7■■■□□ 2.02
PSMD11-208ENST00000579451 FGD5Q6ZNL6 1462 aa27.68■■■□□ 2.02
PSMD11-208ENST00000579451 CUX1P39880 1505 aa27.66■■■□□ 2.02
PSMD11-208ENST00000579451 TDRD9Q8NDG6 1382 aaKnown RBP27.63■■■□□ 2.01
PSMD11-208ENST00000579451 FBLN2P98095 1184 aa27.62■■■□□ 2.01
PSMD11-208ENST00000579451 SNAPC4Q5SXM2 1469 aa27.57■■■□□ 2
PSMD11-208ENST00000579451 CYB5RLQ6IPT4 315 aa27.53■■■□□ 2
PSMD11-208ENST00000579451 MAGI1Q96QZ7 1491 aaPredicted RBP27.51■■■□□ 2
PSMD11-208ENST00000579451 ARAP1Q96P48 1450 aa27.51■■□□□ 1.99
PSMD11-208ENST00000579451 PBRM1Q86U86 1689 aa27.5■■□□□ 1.99
PSMD11-208ENST00000579451 GRIN2BQ13224 1484 aa27.49■■□□□ 1.99
PSMD11-208ENST00000579451 CLASP1Q7Z460 1538 aa27.47■■□□□ 1.99
PSMD11-208ENST00000579451 SYNJ1O43426 1573 aa27.46■■□□□ 1.99
PSMD11-208ENST00000579451 SUPT5HO00267 1087 aaKnown RBP27.43■■□□□ 1.98
PSMD11-208ENST00000579451 CHMP7Q8WUX9 453 aaPredicted RBP27.43■■□□□ 1.98
PSMD11-208ENST00000579451 SYNJ2O15056 1496 aa27.41■■□□□ 1.98
PSMD11-208ENST00000579451 GAPVD1Q14C86 1478 aa27.39■■□□□ 1.98
PSMD11-208ENST00000579451 ABCA5Q8WWZ7 1642 aa27.38■■□□□ 1.97
PSMD11-208ENST00000579451 ABCA10Q8WWZ4 1543 aa27.38■■□□□ 1.97
PSMD11-208ENST00000579451 BIVM-ERCC5R4GMW8 1640 aa27.28■■□□□ 1.96
PSMD11-208ENST00000579451 TOP2BQ02880 1626 aa27.25■■□□□ 1.95
PSMD11-208ENST00000579451 TRHP20396 242 aaPredicted RBP27.23■■□□□ 1.95
PSMD11-208ENST00000579451 WRNQ14191 1432 aaPredicted RBP eCLIP27.23■■□□□ 1.95
PSMD11-208ENST00000579451 ADAMTS12P58397 1594 aa27.17■■□□□ 1.94
PSMD11-208ENST00000579451 GRIN2AQ12879 1464 aa27.14■■□□□ 1.94
PSMD11-208ENST00000579451 CEP170Q5SW79 1584 aa27.08■■□□□ 1.93
PSMD11-208ENST00000579451 NUP160Q12769 1436 aa27.05■■□□□ 1.92
PSMD11-208ENST00000579451 ERICH3Q5RHP9 1530 aa27.05■■□□□ 1.92
PSMD11-208ENST00000579451 FHAD1B1AJZ9 1412 aa27.03■■□□□ 1.92
PSMD11-208ENST00000579451 ERCC6L2Q5T890 1561 aa27.02■■□□□ 1.92
PSMD11-208ENST00000579451 SHROOM2Q13796 1616 aa27.01■■□□□ 1.91
PSMD11-208ENST00000579451 RUSC2Q8N2Y8 1516 aa26.79■■□□□ 1.88
PSMD11-208ENST00000579451 PRG4Q92954 1404 aaPredicted RBP26.77■■□□□ 1.88
PSMD11-208ENST00000579451 JPH4Q96JJ6 628 aa26.74■■□□□ 1.87
PSMD11-208ENST00000579451 KIF13AQ9H1H9 1805 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms