RNA–Protein interactions for RNA: ENST00000374720.7

SLC44A1-201, Transcript of solute carrier family 44 member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC44A1, Length 10,511 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1-201ENST00000374720 DCAF8L2P0C7V8 631 aa19.54■□□□□ 0.72
SLC44A1-201ENST00000374720 PELP1Q8IZL8 1130 aaKnown RBP18.95■□□□□ 0.62
SLC44A1-201ENST00000374720 SUPT5HO00267 1087 aaKnown RBP18.5■□□□□ 0.55
SLC44A1-201ENST00000374720 EHMT2Q96KQ7 1210 aa18.45■□□□□ 0.54
SLC44A1-201ENST00000374720 ERICH6Q7L0X2 663 aa18.3■□□□□ 0.52
SLC44A1-201ENST00000374720 APLP2Q06481 763 aa18.13■□□□□ 0.49
SLC44A1-201ENST00000374720 CCER1Q8TC90 406 aaPredicted RBP18.07■□□□□ 0.48
SLC44A1-201ENST00000374720 SHROOM4Q9ULL8 1493 aa17.99■□□□□ 0.47
SLC44A1-201ENST00000374720 TTBK1Q5TCY1 1321 aaPredicted RBP17.89■□□□□ 0.45
SLC44A1-201ENST00000374720 CENPBP07199 599 aaPredicted RBP17.83■□□□□ 0.44
SLC44A1-201ENST00000374720 FAM9AQ8IZU1 332 aaPredicted RBP17.83■□□□□ 0.44
SLC44A1-201ENST00000374720 PCGF6Q9BYE7 350 aa17.71■□□□□ 0.43
SLC44A1-201ENST00000374720 MYT1Q01538 1121 aa17.66■□□□□ 0.42
SLC44A1-201ENST00000374720 NEFLP07196 543 aa17.63■□□□□ 0.41
SLC44A1-201ENST00000374720 RANGAP1P46060 587 aaPredicted RBP17.54■□□□□ 0.4
SLC44A1-201ENST00000374720 YTHDC1Q96MU7 727 aaKnown RBP17.49■□□□□ 0.39
SLC44A1-201ENST00000374720 ATP1B4Q9UN42 357 aaPredicted RBP17.47■□□□□ 0.39
SLC44A1-201ENST00000374720 ZEB1P37275 1124 aaPredicted RBP17.42■□□□□ 0.38
SLC44A1-201ENST00000374720 DAXXQ9UER7 740 aaPredicted RBP17.41■□□□□ 0.38
SLC44A1-201ENST00000374720 UBTFP17480 764 aaKnown RBP17.09■□□□□ 0.33
SLC44A1-201ENST00000374720 NISCHQ9Y2I1 1504 aa17.05■□□□□ 0.32
SLC44A1-201ENST00000374720 POLR3GLQ9BT43 218 aa17.05■□□□□ 0.32
SLC44A1-201ENST00000374720 TRIM41Q8WV44 630 aa17.04■□□□□ 0.32
SLC44A1-201ENST00000374720 ZNF316A6NFI3 1004 aaPredicted RBP16.97■□□□□ 0.31
SLC44A1-201ENST00000374720 MYT1LQ9UL68 1186 aa16.92■□□□□ 0.3
SLC44A1-201ENST00000374720 RTL5Q5HYW3 569 aaPredicted RBP16.92■□□□□ 0.3
SLC44A1-201ENST00000374720 CNGB1Q14028 1251 aaPredicted RBP16.9■□□□□ 0.3
SLC44A1-201ENST00000374720 PPARGC1BQ86YN6 1023 aaKnown RBP16.9■□□□□ 0.3
SLC44A1-201ENST00000374720 CLSPNQ9HAW4 1339 aa16.85■□□□□ 0.29
SLC44A1-201ENST00000374720 SLC4A1APQ9BWU0 796 aaKnown RBP16.82■□□□□ 0.28
SLC44A1-201ENST00000374720 CHIC1Q5VXU3 224 aa16.79■□□□□ 0.28
SLC44A1-201ENST00000374720 ITGAEP38570 1179 aa16.76■□□□□ 0.27
SLC44A1-201ENST00000374720 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.7■□□□□ 0.26
SLC44A1-201ENST00000374720 HNRNPUL2Q1KMD3 747 aaKnown RBP16.7■□□□□ 0.26
SLC44A1-201ENST00000374720 TRIM26Q12899 539 aaPredicted RBP16.61■□□□□ 0.25
SLC44A1-201ENST00000374720 HRCP23327 699 aa16.6■□□□□ 0.25
SLC44A1-201ENST00000374720 ZBTB47Q9UFB7 747 aaPredicted RBP16.47■□□□□ 0.23
SLC44A1-201ENST00000374720 BCL11AQ9H165 835 aa16.42■□□□□ 0.22
SLC44A1-201ENST00000374720 BCANQ96GW7 911 aa16.39■□□□□ 0.21
SLC44A1-201ENST00000374720 SLC24A1O60721 1099 aa16.36■□□□□ 0.21
SLC44A1-201ENST00000374720 DIEXFQ68CQ4 756 aaKnown RBP16.35■□□□□ 0.21
SLC44A1-201ENST00000374720 CDK11AQ9UQ88 783 aaPredicted RBP16.32■□□□□ 0.2
SLC44A1-201ENST00000374720 CANXP27824 592 aaKnown RBP16.29■□□□□ 0.2
SLC44A1-201ENST00000374720 FAM50AQ14320 339 aaKnown RBP16.21■□□□□ 0.19
SLC44A1-201ENST00000374720 EIF5BO60841 1220 aaKnown RBP16.21■□□□□ 0.19
SLC44A1-201ENST00000374720 TRIM52Q96A61 297 aa16.2■□□□□ 0.18
SLC44A1-201ENST00000374720 NEUROD1Q13562 356 aa16.18■□□□□ 0.18
SLC44A1-201ENST00000374720 ZNF326Q5BKZ1 582 aaKnown RBP16.17■□□□□ 0.18
SLC44A1-201ENST00000374720 ANP32BQ92688 251 aaKnown RBP16.15■□□□□ 0.18
SLC44A1-201ENST00000374720 ANP32CO43423 234 aa16.15■□□□□ 0.18
SLC44A1-201ENST00000374720 LOC105371045A0A1W2PR82 267 aa16.14■□□□□ 0.17
SLC44A1-201ENST00000374720 GTF3C3Q9Y5Q9 886 aa16.14■□□□□ 0.17
SLC44A1-201ENST00000374720 ANP32AP39687 249 aaKnown RBP16.14■□□□□ 0.17
SLC44A1-201ENST00000374720 NPM2Q86SE8 214 aaKnown RBP16.1■□□□□ 0.17
SLC44A1-201ENST00000374720 NEFMP07197 916 aa16.09■□□□□ 0.17
SLC44A1-201ENST00000374720 HSP90AA1P07900 732 aaKnown RBP16.05■□□□□ 0.16
SLC44A1-201ENST00000374720 GLIPR1L2Q4G1C9 344 aa16.04■□□□□ 0.16
SLC44A1-201ENST00000374720 UPF2Q9HAU5 1272 aaKnown RBP15.87■□□□□ 0.13
SLC44A1-201ENST00000374720 ARXQ96QS3 562 aa15.87■□□□□ 0.13
SLC44A1-201ENST00000374720 CDK11BP21127 795 aaKnown RBP15.81■□□□□ 0.12
SLC44A1-201ENST00000374720 NBR1Q14596 966 aa15.79■□□□□ 0.12
SLC44A1-201ENST00000374720 FBLN2P98095 1184 aa15.73■□□□□ 0.11
SLC44A1-201ENST00000374720 FKBP8Q14318 412 aa15.71■□□□□ 0.11
SLC44A1-201ENST00000374720 ACIN1Q9UKV3 1341 aaKnown RBP15.69■□□□□ 0.1
SLC44A1-201ENST00000374720 PLPPR3Q6T4P5 718 aa15.65■□□□□ 0.1
SLC44A1-201ENST00000374720 ARID3CA6NKF2 412 aa15.63■□□□□ 0.09
SLC44A1-201ENST00000374720 SALL2Q9Y467 1007 aaPredicted RBP15.61■□□□□ 0.09
SLC44A1-201ENST00000374720 ESF1Q9H501 851 aaKnown RBP15.61■□□□□ 0.09
SLC44A1-201ENST00000374720 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.59■□□□□ 0.09
SLC44A1-201ENST00000374720 STAG3Q9UJ98 1225 aa15.59■□□□□ 0.09
SLC44A1-201ENST00000374720 HNRNPUQ00839 825 aaKnown RBP eCLIP15.58■□□□□ 0.09
SLC44A1-201ENST00000374720 ZNF777Q9ULD5 760 aaPredicted RBP15.58■□□□□ 0.08
SLC44A1-201ENST00000374720 FAM9BQ8IZU0 186 aa15.58■□□□□ 0.08
SLC44A1-201ENST00000374720 CCDC136Q96JN2 1154 aa15.57■□□□□ 0.08
SLC44A1-201ENST00000374720 TNNT2P45379 298 aaPredicted RBP15.55■□□□□ 0.08
SLC44A1-201ENST00000374720 CHGAP10645 457 aaKnown RBP15.55■□□□□ 0.08
SLC44A1-201ENST00000374720 TRIM44Q96DX7 344 aaPredicted RBP15.53■□□□□ 0.08
SLC44A1-201ENST00000374720 A0A0G2JS52 829 aa15.52■□□□□ 0.08
SLC44A1-201ENST00000374720 MYH16Q9H6N6 1097 aa15.52■□□□□ 0.08
SLC44A1-201ENST00000374720 SCAF1Q9H7N4 1312 aaKnown RBP15.5■□□□□ 0.07
SLC44A1-201ENST00000374720 P3H3Q8IVL6 736 aa15.5■□□□□ 0.07
SLC44A1-201ENST00000374720 NCLP19338 710 aaKnown RBP15.49■□□□□ 0.07
SLC44A1-201ENST00000374720 TONSLQ96HA7 1378 aa15.48■□□□□ 0.07
SLC44A1-201ENST00000374720 TULP1O00294 542 aaPredicted RBP15.47■□□□□ 0.07
SLC44A1-201ENST00000374720 WDR43Q15061 677 aaKnown RBP eCLIP15.45■□□□□ 0.06
SLC44A1-201ENST00000374720 TMC1Q8TDI8 760 aa15.44■□□□□ 0.06
SLC44A1-201ENST00000374720 PABPN1Q86U42 306 aaKnown RBP eCLIP15.44■□□□□ 0.06
SLC44A1-201ENST00000374720 PTMAP06454 111 aaKnown RBP15.43■□□□□ 0.06
SLC44A1-201ENST00000374720 ZRSR1Q15695 479 aaKnown RBP15.42■□□□□ 0.06
SLC44A1-201ENST00000374720 DNTTIP2Q5QJE6 756 aaKnown RBP15.42■□□□□ 0.06
SLC44A1-201ENST00000374720 BECN1Q14457 450 aa15.42■□□□□ 0.06
SLC44A1-201ENST00000374720 TPRNQ4KMQ1 711 aa15.41■□□□□ 0.06
SLC44A1-201ENST00000374720 GOLGA6L22H0YM25 854 aa15.4■□□□□ 0.06
SLC44A1-201ENST00000374720 DDX10Q13206 875 aaKnown RBP15.4■□□□□ 0.06
SLC44A1-201ENST00000374720 IRX6P78412 446 aaPredicted RBP15.38■□□□□ 0.05
SLC44A1-201ENST00000374720 DDRGK1Q96HY6 314 aa15.37■□□□□ 0.05
SLC44A1-201ENST00000374720 ZBTB7CA1YPR0 619 aa15.35■□□□□ 0.05
SLC44A1-201ENST00000374720 ANP32EQ9BTT0 268 aa15.34■□□□□ 0.05
SLC44A1-201ENST00000374720 PLEKHG5O94827 1062 aa15.33■□□□□ 0.05
SLC44A1-201ENST00000374720 NAP1L5Q96NT1 182 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms