RNA–Protein interactions for RNA: ENST00000556248.1

PAPOLA-218, Transcript of poly(A) polymerase alpha, humanhuman

TSL 5

Gene PAPOLA, Length 652 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPOLA-218ENST00000556248 NISCHQ9Y2I1 1504 aa38.57■■■■□ 3.76
PAPOLA-218ENST00000556248 CCDC180Q9P1Z9 1646 aa34.61■■■■□ 3.13
PAPOLA-218ENST00000556248 ABCC9O60706 1549 aa34.22■■■■□ 3.07
PAPOLA-218ENST00000556248 RB1CC1Q8TDY2 1594 aa32.74■■■□□ 2.83
PAPOLA-218ENST00000556248 NACADO15069 1562 aa32.58■■■□□ 2.81
PAPOLA-218ENST00000556248 MYO15BQ96JP2 1530 aa32.25■■■□□ 2.75
PAPOLA-218ENST00000556248 DCAF8L2P0C7V8 631 aa32.22■■■□□ 2.75
PAPOLA-218ENST00000556248 UNC13AQ9UPW8 1703 aa32.15■■■□□ 2.74
PAPOLA-218ENST00000556248 ZCCHC6Q5VYS8 1495 aaKnown RBP32.05■■■□□ 2.72
PAPOLA-218ENST00000556248 DCAF1Q9Y4B6 1507 aa31.92■■■□□ 2.7
PAPOLA-218ENST00000556248 DNAJC5BQ9UF47 199 aa31.85■■■□□ 2.69
PAPOLA-218ENST00000556248 BICRAQ9NZM4 1560 aa31.83■■■□□ 2.69
PAPOLA-218ENST00000556248 PABPN1Q86U42 306 aaKnown RBP eCLIP31.81■■■□□ 2.68
PAPOLA-218ENST00000556248 SCRIBQ14160 1630 aa31.47■■■□□ 2.63
PAPOLA-218ENST00000556248 SHROOM4Q9ULL8 1493 aa31.4■■■□□ 2.62
PAPOLA-218ENST00000556248 CC2D2AQ9P2K1 1620 aa31■■■□□ 2.55
PAPOLA-218ENST00000556248 EIF4G1Q04637 1599 aaKnown RBP30.99■■■□□ 2.55
PAPOLA-218ENST00000556248 CECR2Q9BXF3 1484 aa30.8■■■□□ 2.52
PAPOLA-218ENST00000556248 SMARCA4P51532 1647 aa30.08■■■□□ 2.41
PAPOLA-218ENST00000556248 NCAPD3P42695 1498 aa30.04■■■□□ 2.4
PAPOLA-218ENST00000556248 ATAD2BQ9ULI0 1458 aa29.99■■■□□ 2.39
PAPOLA-218ENST00000556248 SMARCA2P51531 1590 aa29.93■■■□□ 2.38
PAPOLA-218ENST00000556248 BAZ1AQ9NRL2 1556 aaPredicted RBP29.93■■■□□ 2.38
PAPOLA-218ENST00000556248 HMGXB3Q12766 1538 aa29.9■■■□□ 2.38
PAPOLA-218ENST00000556248 PEG3Q9GZU2 1588 aa29.81■■■□□ 2.36
PAPOLA-218ENST00000556248 MROH2BQ7Z745 1585 aa29.72■■■□□ 2.35
PAPOLA-218ENST00000556248 BAZ1BQ9UIG0 1483 aaKnown RBP29.69■■■□□ 2.34
PAPOLA-218ENST00000556248 NESP48681 1621 aa29.49■■■□□ 2.31
PAPOLA-218ENST00000556248 ERCC6Q03468 1493 aa29.49■■■□□ 2.31
PAPOLA-218ENST00000556248 CUX2O14529 1486 aa29.42■■■□□ 2.3
PAPOLA-218ENST00000556248 WIZO95785 1651 aa29.41■■■□□ 2.3
PAPOLA-218ENST00000556248 LAMC3Q9Y6N6 1575 aa29.37■■■□□ 2.29
PAPOLA-218ENST00000556248 THOC2Q8NI27 1593 aaKnown RBP29.24■■■□□ 2.27
PAPOLA-218ENST00000556248 KIF21AQ7Z4S6 1674 aa29.22■■■□□ 2.27
PAPOLA-218ENST00000556248 RSF1Q96T23 1441 aaPredicted RBP29.16■■■□□ 2.26
PAPOLA-218ENST00000556248 CADPSQ9ULU8 1353 aa29.1■■■□□ 2.25
PAPOLA-218ENST00000556248 PDS5BQ9NTI5 1447 aa29.1■■■□□ 2.25
PAPOLA-218ENST00000556248 DNAJC5Q9H3Z4 198 aa29.05■■■□□ 2.24
PAPOLA-218ENST00000556248 TOP2AP11388 1531 aaKnown RBP29.04■■■□□ 2.24
PAPOLA-218ENST00000556248 MRC2Q9UBG0 1479 aa28.88■■■□□ 2.21
PAPOLA-218ENST00000556248 CFTRP13569 1480 aa28.86■■■□□ 2.21
PAPOLA-218ENST00000556248 WDR62O43379 1518 aa28.85■■■□□ 2.21
PAPOLA-218ENST00000556248 CEP164Q9UPV0 1460 aa28.8■■■□□ 2.2
PAPOLA-218ENST00000556248 FANCD2Q9BXW9 1451 aa28.79■■■□□ 2.2
PAPOLA-218ENST00000556248 PRDM2Q13029 1718 aa28.77■■■□□ 2.2
PAPOLA-218ENST00000556248 CCDC88BA6NC98 1476 aa28.66■■■□□ 2.18
PAPOLA-218ENST00000556248 URB2Q14146 1524 aaKnown RBP28.58■■■□□ 2.17
PAPOLA-218ENST00000556248 TOPBP1Q92547 1522 aa28.31■■■□□ 2.12
PAPOLA-218ENST00000556248 DNMBPQ6XZF7 1577 aa28.24■■■□□ 2.11
PAPOLA-218ENST00000556248 IFT140Q96RY7 1462 aa28.22■■■□□ 2.11
PAPOLA-218ENST00000556248 ABCC8Q09428 1581 aa28.22■■■□□ 2.11
PAPOLA-218ENST00000556248 ZNF608Q9ULD9 1512 aaPredicted RBP28.17■■■□□ 2.1
PAPOLA-218ENST00000556248 TARBP1Q13395 1621 aaKnown RBP28.1■■■□□ 2.09
PAPOLA-218ENST00000556248 EIF4G3O43432 1585 aaKnown RBP28.09■■■□□ 2.09
PAPOLA-218ENST00000556248 POLA1P09884 1462 aaPredicted RBP28.02■■■□□ 2.08
PAPOLA-218ENST00000556248 OSCARQ8IYS5 282 aa28■■■□□ 2.07
PAPOLA-218ENST00000556248 CUX1P39880 1505 aa27.92■■■□□ 2.06
PAPOLA-218ENST00000556248 SUPT5HO00267 1087 aaKnown RBP27.9■■■□□ 2.06
PAPOLA-218ENST00000556248 AQRO60306 1485 aaKnown RBP eCLIP27.89■■■□□ 2.06
PAPOLA-218ENST00000556248 RAD54L2Q9Y4B4 1467 aa27.89■■■□□ 2.05
PAPOLA-218ENST00000556248 FGD5Q6ZNL6 1462 aa27.88■■■□□ 2.05
PAPOLA-218ENST00000556248 CHD1O14646 1710 aa27.87■■■□□ 2.05
PAPOLA-218ENST00000556248 SOGA1O94964 1423 aa27.84■■■□□ 2.05
PAPOLA-218ENST00000556248 WDR97A6NE52 1622 aa27.83■■■□□ 2.05
PAPOLA-218ENST00000556248 TRIM41Q8WV44 630 aa27.8■■■□□ 2.04
PAPOLA-218ENST00000556248 RIMBP3CA6NJZ7 1639 aa27.78■■■□□ 2.04
PAPOLA-218ENST00000556248 RIMBP3BA6NNM3 1639 aa27.78■■■□□ 2.04
PAPOLA-218ENST00000556248 RIMBP3Q9UFD9 1639 aa27.78■■■□□ 2.04
PAPOLA-218ENST00000556248 TDRD9Q8NDG6 1382 aaKnown RBP27.73■■■□□ 2.03
PAPOLA-218ENST00000556248 ARHGEF11O15085 1522 aa27.67■■■□□ 2.02
PAPOLA-218ENST00000556248 SNAPC4Q5SXM2 1469 aa27.65■■■□□ 2.02
PAPOLA-218ENST00000556248 PBRM1Q86U86 1689 aa27.64■■■□□ 2.02
PAPOLA-218ENST00000556248 MAGI1Q96QZ7 1491 aaPredicted RBP27.61■■■□□ 2.01
PAPOLA-218ENST00000556248 BIVM-ERCC5R4GMW8 1640 aa27.6■■■□□ 2.01
PAPOLA-218ENST00000556248 GRIN2BQ13224 1484 aa27.6■■■□□ 2.01
PAPOLA-218ENST00000556248 ABCA10Q8WWZ4 1543 aa27.6■■■□□ 2.01
PAPOLA-218ENST00000556248 ABCA5Q8WWZ7 1642 aa27.59■■■□□ 2.01
PAPOLA-218ENST00000556248 TOP2BQ02880 1626 aa27.56■■■□□ 2
PAPOLA-218ENST00000556248 SYNJ1O43426 1573 aa27.54■■■□□ 2
PAPOLA-218ENST00000556248 FBLN2P98095 1184 aa27.54■■■□□ 2
PAPOLA-218ENST00000556248 GAPVD1Q14C86 1478 aa27.53■■■□□ 2
PAPOLA-218ENST00000556248 CLASP1Q7Z460 1538 aa27.51■■■□□ 2
PAPOLA-218ENST00000556248 SYNJ2O15056 1496 aa27.5■■□□□ 1.99
PAPOLA-218ENST00000556248 WRNQ14191 1432 aaPredicted RBP eCLIP27.49■■□□□ 1.99
PAPOLA-218ENST00000556248 ARAP1Q96P48 1450 aa27.42■■□□□ 1.98
PAPOLA-218ENST00000556248 CHMP7Q8WUX9 453 aaPredicted RBP27.41■■□□□ 1.98
PAPOLA-218ENST00000556248 ADAMTS12P58397 1594 aa27.35■■□□□ 1.97
PAPOLA-218ENST00000556248 CYB5RLQ6IPT4 315 aa27.31■■□□□ 1.96
PAPOLA-218ENST00000556248 GRIN2AQ12879 1464 aa27.27■■□□□ 1.96
PAPOLA-218ENST00000556248 ERICH3Q5RHP9 1530 aa27.26■■□□□ 1.96
PAPOLA-218ENST00000556248 CEP170Q5SW79 1584 aa27.21■■□□□ 1.95
PAPOLA-218ENST00000556248 FHAD1B1AJZ9 1412 aa27.19■■□□□ 1.94
PAPOLA-218ENST00000556248 NUP160Q12769 1436 aa27.18■■□□□ 1.94
PAPOLA-218ENST00000556248 SHROOM2Q13796 1616 aa27.11■■□□□ 1.93
PAPOLA-218ENST00000556248 ERCC6L2Q5T890 1561 aa27.09■■□□□ 1.93
PAPOLA-218ENST00000556248 RUSC2Q8N2Y8 1516 aa26.96■■□□□ 1.91
PAPOLA-218ENST00000556248 CUL7Q14999 1698 aa26.95■■□□□ 1.9
PAPOLA-218ENST00000556248 KIF27Q86VH2 1401 aa26.92■■□□□ 1.9
PAPOLA-218ENST00000556248 IGF1RP08069 1367 aa26.89■■□□□ 1.9
PAPOLA-218ENST00000556248 TRHP20396 242 aaPredicted RBP26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms