RNA–Protein interactions for RNA: ENST00000492766.5

RERE-215, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 3

Gene RERE, Length 367 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-215ENST00000492766 NISCHQ9Y2I1 1504 aa33.07■■■□□ 2.88
RERE-215ENST00000492766 CCDC180Q9P1Z9 1646 aa29.43■■■□□ 2.3
RERE-215ENST00000492766 ABCC9O60706 1549 aa28.55■■■□□ 2.16
RERE-215ENST00000492766 ZCCHC6Q5VYS8 1495 aaKnown RBP27.63■■■□□ 2.01
RERE-215ENST00000492766 RB1CC1Q8TDY2 1594 aa27.56■■■□□ 2
RERE-215ENST00000492766 NACADO15069 1562 aa27.55■■■□□ 2
RERE-215ENST00000492766 MYO15BQ96JP2 1530 aa27.44■■□□□ 1.98
RERE-215ENST00000492766 DCAF1Q9Y4B6 1507 aa27.38■■□□□ 1.97
RERE-215ENST00000492766 DCAF8L2P0C7V8 631 aa27.37■■□□□ 1.97
RERE-215ENST00000492766 UNC13AQ9UPW8 1703 aa27.05■■□□□ 1.92
RERE-215ENST00000492766 SCRIBQ14160 1630 aa26.83■■□□□ 1.89
RERE-215ENST00000492766 BICRAQ9NZM4 1560 aa26.76■■□□□ 1.87
RERE-215ENST00000492766 PABPN1Q86U42 306 aaKnown RBP eCLIP26.62■■□□□ 1.85
RERE-215ENST00000492766 SHROOM4Q9ULL8 1493 aa26.48■■□□□ 1.83
RERE-215ENST00000492766 EIF4G1Q04637 1599 aaKnown RBP26.02■■□□□ 1.76
RERE-215ENST00000492766 DNAJC5BQ9UF47 199 aa26■■□□□ 1.75
RERE-215ENST00000492766 CC2D2AQ9P2K1 1620 aa25.88■■□□□ 1.73
RERE-215ENST00000492766 CECR2Q9BXF3 1484 aa25.74■■□□□ 1.71
RERE-215ENST00000492766 SMARCA4P51532 1647 aa25.69■■□□□ 1.7
RERE-215ENST00000492766 BAZ1AQ9NRL2 1556 aaPredicted RBP25.63■■□□□ 1.69
RERE-215ENST00000492766 MROH2BQ7Z745 1585 aa25.5■■□□□ 1.67
RERE-215ENST00000492766 SMARCA2P51531 1590 aa25.44■■□□□ 1.66
RERE-215ENST00000492766 ATAD2BQ9ULI0 1458 aa25.44■■□□□ 1.66
RERE-215ENST00000492766 PEG3Q9GZU2 1588 aa25.42■■□□□ 1.66
RERE-215ENST00000492766 NCAPD3P42695 1498 aa25.38■■□□□ 1.65
RERE-215ENST00000492766 HMGXB3Q12766 1538 aa25.36■■□□□ 1.65
RERE-215ENST00000492766 WIZO95785 1651 aa25.26■■□□□ 1.63
RERE-215ENST00000492766 BAZ1BQ9UIG0 1483 aaKnown RBP25.24■■□□□ 1.63
RERE-215ENST00000492766 RSF1Q96T23 1441 aaPredicted RBP25.21■■□□□ 1.63
RERE-215ENST00000492766 TOP2AP11388 1531 aaKnown RBP25.01■■□□□ 1.59
RERE-215ENST00000492766 NESP48681 1621 aa24.78■■□□□ 1.56
RERE-215ENST00000492766 LAMC3Q9Y6N6 1575 aa24.74■■□□□ 1.55
RERE-215ENST00000492766 CCDC88BA6NC98 1476 aa24.64■■□□□ 1.54
RERE-215ENST00000492766 CADPSQ9ULU8 1353 aa24.62■■□□□ 1.53
RERE-215ENST00000492766 ERCC6Q03468 1493 aa24.58■■□□□ 1.53
RERE-215ENST00000492766 SUPT5HO00267 1087 aaKnown RBP24.58■■□□□ 1.53
RERE-215ENST00000492766 KIF21AQ7Z4S6 1674 aa24.57■■□□□ 1.52
RERE-215ENST00000492766 CFTRP13569 1480 aa24.55■■□□□ 1.52
RERE-215ENST00000492766 PRDM2Q13029 1718 aa24.53■■□□□ 1.52
RERE-215ENST00000492766 PDS5BQ9NTI5 1447 aa24.49■■□□□ 1.51
RERE-215ENST00000492766 THOC2Q8NI27 1593 aaKnown RBP24.46■■□□□ 1.51
RERE-215ENST00000492766 FANCD2Q9BXW9 1451 aa24.38■■□□□ 1.49
RERE-215ENST00000492766 CEP164Q9UPV0 1460 aa24.36■■□□□ 1.49
RERE-215ENST00000492766 MRC2Q9UBG0 1479 aa24.31■■□□□ 1.48
RERE-215ENST00000492766 CUX2O14529 1486 aa24.3■■□□□ 1.48
RERE-215ENST00000492766 WDR62O43379 1518 aa24.25■■□□□ 1.47
RERE-215ENST00000492766 URB2Q14146 1524 aaKnown RBP24.17■■□□□ 1.46
RERE-215ENST00000492766 DNMBPQ6XZF7 1577 aa24.05■■□□□ 1.44
RERE-215ENST00000492766 TOPBP1Q92547 1522 aa24.04■■□□□ 1.44
RERE-215ENST00000492766 ABCC8Q09428 1581 aa23.98■■□□□ 1.43
RERE-215ENST00000492766 CUX1P39880 1505 aa23.93■■□□□ 1.42
RERE-215ENST00000492766 POLA1P09884 1462 aaPredicted RBP23.85■■□□□ 1.41
RERE-215ENST00000492766 IFT140Q96RY7 1462 aa23.82■■□□□ 1.4
RERE-215ENST00000492766 FGD5Q6ZNL6 1462 aa23.81■■□□□ 1.4
RERE-215ENST00000492766 TARBP1Q13395 1621 aaKnown RBP23.81■■□□□ 1.4
RERE-215ENST00000492766 BIVM-ERCC5R4GMW8 1640 aa23.8■■□□□ 1.4
RERE-215ENST00000492766 SYNJ1O43426 1573 aa23.79■■□□□ 1.4
RERE-215ENST00000492766 WRNQ14191 1432 aaPredicted RBP eCLIP23.77■■□□□ 1.4
RERE-215ENST00000492766 TOP2BQ02880 1626 aa23.77■■□□□ 1.4
RERE-215ENST00000492766 ZNF608Q9ULD9 1512 aaPredicted RBP23.73■■□□□ 1.39
RERE-215ENST00000492766 WDR97A6NE52 1622 aa23.72■■□□□ 1.39
RERE-215ENST00000492766 EIF4G3O43432 1585 aaKnown RBP23.71■■□□□ 1.39
RERE-215ENST00000492766 RAD54L2Q9Y4B4 1467 aa23.71■■□□□ 1.39
RERE-215ENST00000492766 SOGA1O94964 1423 aa23.67■■□□□ 1.38
RERE-215ENST00000492766 ABCA10Q8WWZ4 1543 aa23.58■■□□□ 1.36
RERE-215ENST00000492766 AQRO60306 1485 aaKnown RBP eCLIP23.56■■□□□ 1.36
RERE-215ENST00000492766 ABCA5Q8WWZ7 1642 aa23.55■■□□□ 1.36
RERE-215ENST00000492766 TDRD9Q8NDG6 1382 aaKnown RBP23.52■■□□□ 1.36
RERE-215ENST00000492766 PBRM1Q86U86 1689 aa23.51■■□□□ 1.35
RERE-215ENST00000492766 GAPVD1Q14C86 1478 aa23.43■■□□□ 1.34
RERE-215ENST00000492766 DNAJC5Q9H3Z4 198 aa23.43■■□□□ 1.34
RERE-215ENST00000492766 GRIN2BQ13224 1484 aa23.43■■□□□ 1.34
RERE-215ENST00000492766 SNAPC4Q5SXM2 1469 aa23.41■■□□□ 1.34
RERE-215ENST00000492766 CHD1O14646 1710 aa23.4■■□□□ 1.34
RERE-215ENST00000492766 MAGI1Q96QZ7 1491 aaPredicted RBP23.36■■□□□ 1.33
RERE-215ENST00000492766 ADAMTS12P58397 1594 aa23.31■■□□□ 1.32
RERE-215ENST00000492766 ERICH3Q5RHP9 1530 aa23.3■■□□□ 1.32
RERE-215ENST00000492766 SYNJ2O15056 1496 aa23.27■■□□□ 1.32
RERE-215ENST00000492766 KIF27Q86VH2 1401 aa23.24■■□□□ 1.31
RERE-215ENST00000492766 OSCARQ8IYS5 282 aa23.19■■□□□ 1.3
RERE-215ENST00000492766 TRIM41Q8WV44 630 aa23.18■■□□□ 1.3
RERE-215ENST00000492766 FHAD1B1AJZ9 1412 aa23.16■■□□□ 1.3
RERE-215ENST00000492766 CUL7Q14999 1698 aa23.16■■□□□ 1.3
RERE-215ENST00000492766 FBLN2P98095 1184 aa23.16■■□□□ 1.3
RERE-215ENST00000492766 GRIN2AQ12879 1464 aa23.15■■□□□ 1.3
RERE-215ENST00000492766 CHMP7Q8WUX9 453 aaPredicted RBP23.12■■□□□ 1.29
RERE-215ENST00000492766 CLASP1Q7Z460 1538 aa23.12■■□□□ 1.29
RERE-215ENST00000492766 RUSC2Q8N2Y8 1516 aa23.11■■□□□ 1.29
RERE-215ENST00000492766 IGF1RP08069 1367 aa23.1■■□□□ 1.29
RERE-215ENST00000492766 CEP170Q5SW79 1584 aa23.07■■□□□ 1.28
RERE-215ENST00000492766 NUP160Q12769 1436 aa23.04■■□□□ 1.28
RERE-215ENST00000492766 CHIC1Q5VXU3 224 aa23.03■■□□□ 1.28
RERE-215ENST00000492766 RIMBP3CA6NJZ7 1639 aa22.98■■□□□ 1.27
RERE-215ENST00000492766 RIMBP3BA6NNM3 1639 aa22.98■■□□□ 1.27
RERE-215ENST00000492766 RIMBP3Q9UFD9 1639 aa22.98■■□□□ 1.27
RERE-215ENST00000492766 CARMIL1Q5VZK9 1371 aa22.97■■□□□ 1.27
RERE-215ENST00000492766 ARHGEF11O15085 1522 aa22.96■■□□□ 1.27
RERE-215ENST00000492766 SHROOM2Q13796 1616 aa22.91■■□□□ 1.26
RERE-215ENST00000492766 RAPGEF2Q9Y4G8 1499 aa22.89■■□□□ 1.25
RERE-215ENST00000492766 EEA1Q15075 1411 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms