Protein–RNA interactions for Protein: P11802

CDK4, Cyclin-dependent kinase 4, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4P11802 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC13.56□□□□□ -0.24
CDK4P11802 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC13.56□□□□□ -0.24
CDK4P11802 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDK4P11802 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CDK4P11802 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.56□□□□□ -0.24
CDK4P11802 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC13.56□□□□□ -0.24
CDK4P11802 PAM-203ENST00000346918 3302 ntTSL 5 BASIC13.56□□□□□ -0.24
CDK4P11802 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDK4P11802 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDK4P11802 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDK4P11802 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDK4P11802 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDK4P11802 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC13.56□□□□□ -0.24
CDK4P11802 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC13.56□□□□□ -0.24
CDK4P11802 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDK4P11802 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
CDK4P11802 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDK4P11802 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDK4P11802 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC13.56□□□□□ -0.24
CDK4P11802 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC13.56□□□□□ -0.24
CDK4P11802 AC067931.2-201ENST00000623655 2003 ntBASIC13.56□□□□□ -0.24
CDK4P11802 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CDK4P11802 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
CDK4P11802 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDK4P11802 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC13.55□□□□□ -0.24
CDK4P11802 AMT-256ENST00000638063 1783 ntTSL 5 BASIC13.55□□□□□ -0.24
CDK4P11802 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDK4P11802 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDK4P11802 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC13.55□□□□□ -0.24
CDK4P11802 PER1-202ENST00000354903 3115 ntTSL 2 BASIC13.55□□□□□ -0.24
CDK4P11802 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.55□□□□□ -0.24
CDK4P11802 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDK4P11802 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDK4P11802 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDK4P11802 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDK4P11802 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDK4P11802 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CDK4P11802 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
CDK4P11802 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CDK4P11802 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDK4P11802 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CDK4P11802 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDK4P11802 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDK4P11802 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDK4P11802 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDK4P11802 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDK4P11802 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CDK4P11802 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDK4P11802 AC103592.1-201ENST00000394513 664 ntBASIC13.55□□□□□ -0.24
CDK4P11802 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC13.55□□□□□ -0.24
CDK4P11802 AL929302.1-201ENST00000426556 871 ntBASIC13.55□□□□□ -0.24
CDK4P11802 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC13.55□□□□□ -0.24
CDK4P11802 AL512599.1-201ENST00000430724 685 ntBASIC13.55□□□□□ -0.24
CDK4P11802 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDK4P11802 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC13.55□□□□□ -0.24
CDK4P11802 AC092862.1-201ENST00000541534 533 ntBASIC13.55□□□□□ -0.24
CDK4P11802 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC13.55□□□□□ -0.24
CDK4P11802 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC13.55□□□□□ -0.24
CDK4P11802 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDK4P11802 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDK4P11802 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC13.55□□□□□ -0.24
CDK4P11802 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDK4P11802 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDK4P11802 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDK4P11802 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDK4P11802 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
CDK4P11802 PDXDC2P-206ENST00000534700 1315 ntBASIC13.55□□□□□ -0.24
CDK4P11802 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDK4P11802 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CDK4P11802 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDK4P11802 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC13.55□□□□□ -0.24
CDK4P11802 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDK4P11802 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC13.55□□□□□ -0.24
CDK4P11802 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CDK4P11802 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CDK4P11802 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDK4P11802 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDK4P11802 KRT8P18-201ENST00000413425 1445 ntBASIC13.55□□□□□ -0.24
CDK4P11802 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.55□□□□□ -0.24
CDK4P11802 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDK4P11802 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.55□□□□□ -0.24
CDK4P11802 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CDK4P11802 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDK4P11802 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CDK4P11802 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CDK4P11802 Z98257.2-202ENST00000641138 1548 ntBASIC13.54□□□□□ -0.24
CDK4P11802 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CDK4P11802 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDK4P11802 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CDK4P11802 AC090643.2-201ENST00000623442 2029 ntBASIC13.54□□□□□ -0.24
CDK4P11802 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDK4P11802 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDK4P11802 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDK4P11802 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.54□□□□□ -0.24
CDK4P11802 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDK4P11802 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CDK4P11802 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC13.54□□□□□ -0.24
CDK4P11802 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDK4P11802 FAM21EP-201ENST00000417804 985 ntBASIC13.54□□□□□ -0.24
CDK4P11802 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms