RNA–Protein interactions for RNA: ENST00000613094.4

PITX2-211, Transcript of paired like homeodomain 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PITX2, Length 3,240 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITX2-211ENST00000613094 NISCHQ9Y2I1 1504 aa27.84■■■□□ 2.05
PITX2-211ENST00000613094 SHROOM4Q9ULL8 1493 aa23.89■■□□□ 1.42
PITX2-211ENST00000613094 ZCCHC6Q5VYS8 1495 aaKnown RBP23.58■■□□□ 1.37
PITX2-211ENST00000613094 CCDC180Q9P1Z9 1646 aa23.56■■□□□ 1.36
PITX2-211ENST00000613094 SUPT5HO00267 1087 aaKnown RBP23.46■■□□□ 1.35
PITX2-211ENST00000613094 DCAF8L2P0C7V8 631 aa23.06■■□□□ 1.28
PITX2-211ENST00000613094 MYO15BQ96JP2 1530 aa22.88■■□□□ 1.25
PITX2-211ENST00000613094 CHIC1Q5VXU3 224 aa22.87■■□□□ 1.25
PITX2-211ENST00000613094 DCAF1Q9Y4B6 1507 aa22.79■■□□□ 1.24
PITX2-211ENST00000613094 HRCP23327 699 aa22.37■■□□□ 1.17
PITX2-211ENST00000613094 PCGF6Q9BYE7 350 aa22.3■■□□□ 1.16
PITX2-211ENST00000613094 ABCC9O60706 1549 aa22.28■■□□□ 1.16
PITX2-211ENST00000613094 LOC105371045A0A1W2PR82 267 aa22.23■■□□□ 1.15
PITX2-211ENST00000613094 SCRIBQ14160 1630 aa22.18■■□□□ 1.14
PITX2-211ENST00000613094 RSF1Q96T23 1441 aaPredicted RBP22.1■■□□□ 1.13
PITX2-211ENST00000613094 PPARGC1BQ86YN6 1023 aaKnown RBP21.96■■□□□ 1.11
PITX2-211ENST00000613094 RB1CC1Q8TDY2 1594 aa21.92■■□□□ 1.1
PITX2-211ENST00000613094 TRIM41Q8WV44 630 aa21.81■■□□□ 1.08
PITX2-211ENST00000613094 TRIM26Q12899 539 aaPredicted RBP21.8■■□□□ 1.08
PITX2-211ENST00000613094 CECR2Q9BXF3 1484 aa21.76■■□□□ 1.07
PITX2-211ENST00000613094 NACADO15069 1562 aa21.75■■□□□ 1.07
PITX2-211ENST00000613094 FAM9AQ8IZU1 332 aaPredicted RBP21.68■■□□□ 1.06
PITX2-211ENST00000613094 MROH2BQ7Z745 1585 aa21.68■■□□□ 1.06
PITX2-211ENST00000613094 WIZO95785 1651 aa21.57■■□□□ 1.04
PITX2-211ENST00000613094 EHMT2Q96KQ7 1210 aa21.53■■□□□ 1.04
PITX2-211ENST00000613094 BAZ1AQ9NRL2 1556 aaPredicted RBP21.42■■□□□ 1.02
PITX2-211ENST00000613094 EIF4G1Q04637 1599 aaKnown RBP21.35■■□□□ 1.01
PITX2-211ENST00000613094 ZEB1P37275 1124 aaPredicted RBP21.31■■□□□ 1
PITX2-211ENST00000613094 TOP2AP11388 1531 aaKnown RBP21.19■□□□□ 0.98
PITX2-211ENST00000613094 SMARCA4P51532 1647 aa21.18■□□□□ 0.98
PITX2-211ENST00000613094 ABCC8Q09428 1581 aa21.16■□□□□ 0.98
PITX2-211ENST00000613094 CCDC88BA6NC98 1476 aa21.13■□□□□ 0.97
PITX2-211ENST00000613094 UNC13AQ9UPW8 1703 aa21.13■□□□□ 0.97
PITX2-211ENST00000613094 SMARCA2P51531 1590 aa21.11■□□□□ 0.97
PITX2-211ENST00000613094 SOGA1O94964 1423 aa20.98■□□□□ 0.95
PITX2-211ENST00000613094 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.97■□□□□ 0.95
PITX2-211ENST00000613094 CEP162Q5TB80 1403 aa20.92■□□□□ 0.94
PITX2-211ENST00000613094 WRNQ14191 1432 aaPredicted RBP eCLIP20.91■□□□□ 0.94
PITX2-211ENST00000613094 RUSC2Q8N2Y8 1516 aa20.88■□□□□ 0.93
PITX2-211ENST00000613094 PABPN1Q86U42 306 aaKnown RBP eCLIP20.88■□□□□ 0.93
PITX2-211ENST00000613094 TTBK1Q5TCY1 1321 aaPredicted RBP20.87■□□□□ 0.93
PITX2-211ENST00000613094 CCER1Q8TC90 406 aaPredicted RBP20.87■□□□□ 0.93
PITX2-211ENST00000613094 BICRAQ9NZM4 1560 aa20.86■□□□□ 0.93
PITX2-211ENST00000613094 TNIKQ9UKE5 1360 aa20.84■□□□□ 0.93
PITX2-211ENST00000613094 CSRNP3Q8WYN3 585 aa20.82■□□□□ 0.92
PITX2-211ENST00000613094 EEA1Q15075 1411 aa20.8■□□□□ 0.92
PITX2-211ENST00000613094 UBTFP17480 764 aaKnown RBP20.75■□□□□ 0.91
PITX2-211ENST00000613094 PEG3Q9GZU2 1588 aa20.75■□□□□ 0.91
PITX2-211ENST00000613094 SCAF1Q9H7N4 1312 aaKnown RBP20.72■□□□□ 0.91
PITX2-211ENST00000613094 GOLGA3Q08378 1498 aa20.71■□□□□ 0.91
PITX2-211ENST00000613094 SYNJ1O43426 1573 aa20.67■□□□□ 0.9
PITX2-211ENST00000613094 ATAD2BQ9ULI0 1458 aa20.6■□□□□ 0.89
PITX2-211ENST00000613094 CEP164Q9UPV0 1460 aa20.57■□□□□ 0.88
PITX2-211ENST00000613094 KIF21BO75037 1637 aa20.55■□□□□ 0.88
PITX2-211ENST00000613094 BAZ1BQ9UIG0 1483 aaKnown RBP20.55■□□□□ 0.88
PITX2-211ENST00000613094 DIEXFQ68CQ4 756 aaKnown RBP20.53■□□□□ 0.88
PITX2-211ENST00000613094 CLIP1P30622 1438 aa20.49■□□□□ 0.87
PITX2-211ENST00000613094 PELP1Q8IZL8 1130 aaKnown RBP20.49■□□□□ 0.87
PITX2-211ENST00000613094 RAPGEF2Q9Y4G8 1499 aa20.46■□□□□ 0.87
PITX2-211ENST00000613094 NEUROD1Q13562 356 aa20.45■□□□□ 0.86
PITX2-211ENST00000613094 ACIN1Q9UKV3 1341 aaKnown RBP20.44■□□□□ 0.86
PITX2-211ENST00000613094 VPS8Q8N3P4 1428 aa20.42■□□□□ 0.86
PITX2-211ENST00000613094 HNRNPUL2Q1KMD3 747 aaKnown RBP20.4■□□□□ 0.86
PITX2-211ENST00000613094 TOP2BQ02880 1626 aa20.37■□□□□ 0.85
PITX2-211ENST00000613094 RANGAP1P46060 587 aaPredicted RBP20.36■□□□□ 0.85
PITX2-211ENST00000613094 ZNF316A6NFI3 1004 aaPredicted RBP20.33■□□□□ 0.84
PITX2-211ENST00000613094 BIVM-ERCC5R4GMW8 1640 aa20.28■□□□□ 0.84
PITX2-211ENST00000613094 APLP2Q06481 763 aa20.27■□□□□ 0.84
PITX2-211ENST00000613094 CENPBP07199 599 aaPredicted RBP20.25■□□□□ 0.83
PITX2-211ENST00000613094 GTF3C3Q9Y5Q9 886 aa20.23■□□□□ 0.83
PITX2-211ENST00000613094 PRXQ9BXM0 1461 aa20.22■□□□□ 0.83
PITX2-211ENST00000613094 ERICH3Q5RHP9 1530 aa20.19■□□□□ 0.82
PITX2-211ENST00000613094 ARAP1Q96P48 1450 aa20.17■□□□□ 0.82
PITX2-211ENST00000613094 CUX1P39880 1505 aa20.17■□□□□ 0.82
PITX2-211ENST00000613094 HMGXB3Q12766 1538 aa20.16■□□□□ 0.82
PITX2-211ENST00000613094 NCAPD3P42695 1498 aa20.16■□□□□ 0.82
PITX2-211ENST00000613094 MIER1Q8N108 512 aa20.1■□□□□ 0.81
PITX2-211ENST00000613094 KANK4Q5T7N3 995 aaPredicted RBP20.1■□□□□ 0.81
PITX2-211ENST00000613094 YTHDC1Q96MU7 727 aaKnown RBP20.09■□□□□ 0.81
PITX2-211ENST00000613094 KIF27Q86VH2 1401 aa20.06■□□□□ 0.8
PITX2-211ENST00000613094 CFTRP13569 1480 aa20.05■□□□□ 0.8
PITX2-211ENST00000613094 DHX57Q6P158 1386 aaKnown RBP20.02■□□□□ 0.8
PITX2-211ENST00000613094 ARHGAP35Q9NRY4 1499 aa19.97■□□□□ 0.79
PITX2-211ENST00000613094 RRBP1Q9P2E9 1410 aaKnown RBP19.96■□□□□ 0.79
PITX2-211ENST00000613094 CLSPNQ9HAW4 1339 aa19.95■□□□□ 0.78
PITX2-211ENST00000613094 CUX2O14529 1486 aa19.88■□□□□ 0.77
PITX2-211ENST00000613094 CCNB3Q8WWL7 1395 aa19.87■□□□□ 0.77
PITX2-211ENST00000613094 IGF1RP08069 1367 aa19.87■□□□□ 0.77
PITX2-211ENST00000613094 PRDM2Q13029 1718 aa19.86■□□□□ 0.77
PITX2-211ENST00000613094 MYT1Q01538 1121 aa19.83■□□□□ 0.77
PITX2-211ENST00000613094 ITGAEP38570 1179 aa19.81■□□□□ 0.76
PITX2-211ENST00000613094 CADPSQ9ULU8 1353 aa19.79■□□□□ 0.76
PITX2-211ENST00000613094 FGD5Q6ZNL6 1462 aa19.78■□□□□ 0.76
PITX2-211ENST00000613094 CARMIL1Q5VZK9 1371 aa19.77■□□□□ 0.75
PITX2-211ENST00000613094 TIAM1Q13009 1591 aa19.76■□□□□ 0.75
PITX2-211ENST00000613094 RAB3GAP2Q9H2M9 1393 aa19.72■□□□□ 0.75
PITX2-211ENST00000613094 MAP3K1Q13233 1512 aa19.7■□□□□ 0.74
PITX2-211ENST00000613094 MAPKBP1O60336 1514 aa19.69■□□□□ 0.74
PITX2-211ENST00000613094 LRRC9Q6ZRR7 1453 aa19.69■□□□□ 0.74
PITX2-211ENST00000613094 PHLDB1Q86UU1 1377 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms