RNA–Protein interactions for RNA: ENST00000565796.5

CDH16-204, Transcript of cadherin 16, humanhuman

TSL 2 BASIC

Gene CDH16, Length 2,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-204ENST00000565796 NISCHQ9Y2I1 1504 aa31.51■■■□□ 2.63
CDH16-204ENST00000565796 CCDC180Q9P1Z9 1646 aa27.58■■■□□ 2.01
CDH16-204ENST00000565796 ABCC9O60706 1549 aa26.44■■□□□ 1.82
CDH16-204ENST00000565796 ZCCHC6Q5VYS8 1495 aaKnown RBP26.39■■□□□ 1.82
CDH16-204ENST00000565796 DCAF8L2P0C7V8 631 aa26.24■■□□□ 1.79
CDH16-204ENST00000565796 DCAF1Q9Y4B6 1507 aa26.01■■□□□ 1.75
CDH16-204ENST00000565796 MYO15BQ96JP2 1530 aa25.8■■□□□ 1.72
CDH16-204ENST00000565796 NACADO15069 1562 aa25.77■■□□□ 1.72
CDH16-204ENST00000565796 RB1CC1Q8TDY2 1594 aa25.64■■□□□ 1.7
CDH16-204ENST00000565796 SHROOM4Q9ULL8 1493 aa25.61■■□□□ 1.69
CDH16-204ENST00000565796 SCRIBQ14160 1630 aa25.39■■□□□ 1.65
CDH16-204ENST00000565796 UNC13AQ9UPW8 1703 aa25.13■■□□□ 1.61
CDH16-204ENST00000565796 SUPT5HO00267 1087 aaKnown RBP24.94■■□□□ 1.58
CDH16-204ENST00000565796 PABPN1Q86U42 306 aaKnown RBP eCLIP24.9■■□□□ 1.58
CDH16-204ENST00000565796 BICRAQ9NZM4 1560 aa24.88■■□□□ 1.57
CDH16-204ENST00000565796 CECR2Q9BXF3 1484 aa24.54■■□□□ 1.52
CDH16-204ENST00000565796 MROH2BQ7Z745 1585 aa24.35■■□□□ 1.49
CDH16-204ENST00000565796 BAZ1AQ9NRL2 1556 aaPredicted RBP24.35■■□□□ 1.49
CDH16-204ENST00000565796 RSF1Q96T23 1441 aaPredicted RBP24.34■■□□□ 1.49
CDH16-204ENST00000565796 SMARCA4P51532 1647 aa24.28■■□□□ 1.48
CDH16-204ENST00000565796 EIF4G1Q04637 1599 aaKnown RBP24.16■■□□□ 1.46
CDH16-204ENST00000565796 WIZO95785 1651 aa24.14■■□□□ 1.46
CDH16-204ENST00000565796 CHIC1Q5VXU3 224 aa24.05■■□□□ 1.44
CDH16-204ENST00000565796 PEG3Q9GZU2 1588 aa23.97■■□□□ 1.43
CDH16-204ENST00000565796 ATAD2BQ9ULI0 1458 aa23.97■■□□□ 1.43
CDH16-204ENST00000565796 SMARCA2P51531 1590 aa23.93■■□□□ 1.42
CDH16-204ENST00000565796 CC2D2AQ9P2K1 1620 aa23.89■■□□□ 1.42
CDH16-204ENST00000565796 TOP2AP11388 1531 aaKnown RBP23.85■■□□□ 1.41
CDH16-204ENST00000565796 BAZ1BQ9UIG0 1483 aaKnown RBP23.83■■□□□ 1.4
CDH16-204ENST00000565796 NCAPD3P42695 1498 aa23.8■■□□□ 1.4
CDH16-204ENST00000565796 HMGXB3Q12766 1538 aa23.73■■□□□ 1.39
CDH16-204ENST00000565796 CCDC88BA6NC98 1476 aa23.62■■□□□ 1.37
CDH16-204ENST00000565796 DNAJC5BQ9UF47 199 aa23.61■■□□□ 1.37
CDH16-204ENST00000565796 LOC105371045A0A1W2PR82 267 aa23.37■■□□□ 1.33
CDH16-204ENST00000565796 TRIM41Q8WV44 630 aa23.22■■□□□ 1.31
CDH16-204ENST00000565796 CFTRP13569 1480 aa23.2■■□□□ 1.3
CDH16-204ENST00000565796 CADPSQ9ULU8 1353 aa23.19■■□□□ 1.3
CDH16-204ENST00000565796 NESP48681 1621 aa23.11■■□□□ 1.29
CDH16-204ENST00000565796 FAM9AQ8IZU1 332 aaPredicted RBP23.07■■□□□ 1.28
CDH16-204ENST00000565796 ABCC8Q09428 1581 aa23.05■■□□□ 1.28
CDH16-204ENST00000565796 LAMC3Q9Y6N6 1575 aa23.04■■□□□ 1.28
CDH16-204ENST00000565796 PRDM2Q13029 1718 aa23.03■■□□□ 1.28
CDH16-204ENST00000565796 PCGF6Q9BYE7 350 aa22.95■■□□□ 1.27
CDH16-204ENST00000565796 FANCD2Q9BXW9 1451 aa22.94■■□□□ 1.26
CDH16-204ENST00000565796 WRNQ14191 1432 aaPredicted RBP eCLIP22.92■■□□□ 1.26
CDH16-204ENST00000565796 EHMT2Q96KQ7 1210 aa22.92■■□□□ 1.26
CDH16-204ENST00000565796 PDS5BQ9NTI5 1447 aa22.89■■□□□ 1.26
CDH16-204ENST00000565796 SYNJ1O43426 1573 aa22.83■■□□□ 1.25
CDH16-204ENST00000565796 CEP164Q9UPV0 1460 aa22.82■■□□□ 1.24
CDH16-204ENST00000565796 KIF21AQ7Z4S6 1674 aa22.81■■□□□ 1.24
CDH16-204ENST00000565796 CUX1P39880 1505 aa22.78■■□□□ 1.24
CDH16-204ENST00000565796 TOP2BQ02880 1626 aa22.75■■□□□ 1.23
CDH16-204ENST00000565796 BIVM-ERCC5R4GMW8 1640 aa22.72■■□□□ 1.23
CDH16-204ENST00000565796 ERCC6Q03468 1493 aa22.7■■□□□ 1.22
CDH16-204ENST00000565796 HRCP23327 699 aa22.67■■□□□ 1.22
CDH16-204ENST00000565796 URB2Q14146 1524 aaKnown RBP22.66■■□□□ 1.22
CDH16-204ENST00000565796 DNMBPQ6XZF7 1577 aa22.65■■□□□ 1.22
CDH16-204ENST00000565796 TOPBP1Q92547 1522 aa22.65■■□□□ 1.22
CDH16-204ENST00000565796 MRC2Q9UBG0 1479 aa22.61■■□□□ 1.21
CDH16-204ENST00000565796 FGD5Q6ZNL6 1462 aa22.59■■□□□ 1.21
CDH16-204ENST00000565796 SOGA1O94964 1423 aa22.56■■□□□ 1.2
CDH16-204ENST00000565796 TRIM26Q12899 539 aaPredicted RBP22.55■■□□□ 1.2
CDH16-204ENST00000565796 POLA1P09884 1462 aaPredicted RBP22.52■■□□□ 1.2
CDH16-204ENST00000565796 RUSC2Q8N2Y8 1516 aa22.5■■□□□ 1.19
CDH16-204ENST00000565796 THOC2Q8NI27 1593 aaKnown RBP22.49■■□□□ 1.19
CDH16-204ENST00000565796 WDR62O43379 1518 aa22.49■■□□□ 1.19
CDH16-204ENST00000565796 RAD54L2Q9Y4B4 1467 aa22.47■■□□□ 1.19
CDH16-204ENST00000565796 EEA1Q15075 1411 aa22.39■■□□□ 1.18
CDH16-204ENST00000565796 CUX2O14529 1486 aa22.39■■□□□ 1.18
CDH16-204ENST00000565796 KIF27Q86VH2 1401 aa22.37■■□□□ 1.17
CDH16-204ENST00000565796 PPARGC1BQ86YN6 1023 aaKnown RBP22.36■■□□□ 1.17
CDH16-204ENST00000565796 CSRNP3Q8WYN3 585 aa22.36■■□□□ 1.17
CDH16-204ENST00000565796 ABCA10Q8WWZ4 1543 aa22.36■■□□□ 1.17
CDH16-204ENST00000565796 TARBP1Q13395 1621 aaKnown RBP22.33■■□□□ 1.16
CDH16-204ENST00000565796 WDR97A6NE52 1622 aa22.3■■□□□ 1.16
CDH16-204ENST00000565796 TDRD9Q8NDG6 1382 aaKnown RBP22.29■■□□□ 1.16
CDH16-204ENST00000565796 IFT140Q96RY7 1462 aa22.28■■□□□ 1.16
CDH16-204ENST00000565796 IGF1RP08069 1367 aa22.2■■□□□ 1.15
CDH16-204ENST00000565796 ZNF608Q9ULD9 1512 aaPredicted RBP22.2■■□□□ 1.15
CDH16-204ENST00000565796 GAPVD1Q14C86 1478 aa22.2■■□□□ 1.14
CDH16-204ENST00000565796 ABCA5Q8WWZ7 1642 aa22.2■■□□□ 1.14
CDH16-204ENST00000565796 AQRO60306 1485 aaKnown RBP eCLIP22.19■■□□□ 1.14
CDH16-204ENST00000565796 UBTFP17480 764 aaKnown RBP22.18■■□□□ 1.14
CDH16-204ENST00000565796 CEP162Q5TB80 1403 aa22.16■■□□□ 1.14
CDH16-204ENST00000565796 TNIKQ9UKE5 1360 aa22.13■■□□□ 1.13
CDH16-204ENST00000565796 PRXQ9BXM0 1461 aa22.12■■□□□ 1.13
CDH16-204ENST00000565796 KIF21BO75037 1637 aa22.12■■□□□ 1.13
CDH16-204ENST00000565796 RAPGEF2Q9Y4G8 1499 aa22.11■■□□□ 1.13
CDH16-204ENST00000565796 EIF4G3O43432 1585 aaKnown RBP22.1■■□□□ 1.13
CDH16-204ENST00000565796 GOLGA3Q08378 1498 aa22.1■■□□□ 1.13
CDH16-204ENST00000565796 CARMIL1Q5VZK9 1371 aa22.09■■□□□ 1.13
CDH16-204ENST00000565796 ERICH3Q5RHP9 1530 aa22.09■■□□□ 1.13
CDH16-204ENST00000565796 PBRM1Q86U86 1689 aa22.08■■□□□ 1.12
CDH16-204ENST00000565796 TTBK1Q5TCY1 1321 aaPredicted RBP22.07■■□□□ 1.12
CDH16-204ENST00000565796 GRIN2BQ13224 1484 aa22.06■■□□□ 1.12
CDH16-204ENST00000565796 CUL7Q14999 1698 aa22.03■■□□□ 1.12
CDH16-204ENST00000565796 SNAPC4Q5SXM2 1469 aa21.96■■□□□ 1.11
CDH16-204ENST00000565796 FHAD1B1AJZ9 1412 aa21.94■■□□□ 1.1
CDH16-204ENST00000565796 ADAMTS12P58397 1594 aa21.93■■□□□ 1.1
CDH16-204ENST00000565796 MAGI1Q96QZ7 1491 aaPredicted RBP21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 210.6 ms