RNA–Protein interactions for RNA: ENST00000433179.3

PERM1-202, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PERM1, Length 3,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-202ENST00000433179 NISCHQ9Y2I1 1504 aa28.62■■■□□ 2.17
PERM1-202ENST00000433179 CCDC180Q9P1Z9 1646 aa25.19■■□□□ 1.62
PERM1-202ENST00000433179 ZCCHC6Q5VYS8 1495 aaKnown RBP24.21■■□□□ 1.47
PERM1-202ENST00000433179 DCAF1Q9Y4B6 1507 aa24■■□□□ 1.43
PERM1-202ENST00000433179 MYO15BQ96JP2 1530 aa23.67■■□□□ 1.38
PERM1-202ENST00000433179 SHROOM4Q9ULL8 1493 aa23.29■■□□□ 1.32
PERM1-202ENST00000433179 DCAF8L2P0C7V8 631 aa23.2■■□□□ 1.3
PERM1-202ENST00000433179 NACADO15069 1562 aa23.16■■□□□ 1.3
PERM1-202ENST00000433179 RB1CC1Q8TDY2 1594 aa22.79■■□□□ 1.24
PERM1-202ENST00000433179 ABCC9O60706 1549 aa22.78■■□□□ 1.24
PERM1-202ENST00000433179 SUPT5HO00267 1087 aaKnown RBP22.75■■□□□ 1.23
PERM1-202ENST00000433179 UNC13AQ9UPW8 1703 aa22.69■■□□□ 1.22
PERM1-202ENST00000433179 SCRIBQ14160 1630 aa22.67■■□□□ 1.22
PERM1-202ENST00000433179 BICRAQ9NZM4 1560 aa22.3■■□□□ 1.16
PERM1-202ENST00000433179 RSF1Q96T23 1441 aaPredicted RBP22.16■■□□□ 1.14
PERM1-202ENST00000433179 BAZ1AQ9NRL2 1556 aaPredicted RBP22.06■■□□□ 1.12
PERM1-202ENST00000433179 MROH2BQ7Z745 1585 aa22.02■■□□□ 1.12
PERM1-202ENST00000433179 CECR2Q9BXF3 1484 aa22.01■■□□□ 1.11
PERM1-202ENST00000433179 SMARCA4P51532 1647 aa22.01■■□□□ 1.11
PERM1-202ENST00000433179 PEG3Q9GZU2 1588 aa22■■□□□ 1.11
PERM1-202ENST00000433179 WIZO95785 1651 aa21.9■■□□□ 1.1
PERM1-202ENST00000433179 EIF4G1Q04637 1599 aaKnown RBP21.85■■□□□ 1.09
PERM1-202ENST00000433179 TOP2AP11388 1531 aaKnown RBP21.78■■□□□ 1.08
PERM1-202ENST00000433179 CHIC1Q5VXU3 224 aa21.77■■□□□ 1.07
PERM1-202ENST00000433179 PELP1Q8IZL8 1130 aaKnown RBP21.65■■□□□ 1.06
PERM1-202ENST00000433179 HRCP23327 699 aa21.63■■□□□ 1.05
PERM1-202ENST00000433179 SMARCA2P51531 1590 aa21.59■■□□□ 1.05
PERM1-202ENST00000433179 HMGXB3Q12766 1538 aa21.44■■□□□ 1.02
PERM1-202ENST00000433179 ATAD2BQ9ULI0 1458 aa21.44■■□□□ 1.02
PERM1-202ENST00000433179 PPARGC1BQ86YN6 1023 aaKnown RBP21.44■■□□□ 1.02
PERM1-202ENST00000433179 LOC105371045A0A1W2PR82 267 aa21.42■■□□□ 1.02
PERM1-202ENST00000433179 PCGF6Q9BYE7 350 aa21.42■■□□□ 1.02
PERM1-202ENST00000433179 CCDC88BA6NC98 1476 aa21.37■■□□□ 1.01
PERM1-202ENST00000433179 PABPN1Q86U42 306 aaKnown RBP eCLIP21.34■■□□□ 1.01
PERM1-202ENST00000433179 NCAPD3P42695 1498 aa21.3■■□□□ 1
PERM1-202ENST00000433179 EHMT2Q96KQ7 1210 aa21.26■□□□□ 0.99
PERM1-202ENST00000433179 PRDM2Q13029 1718 aa21.22■□□□□ 0.99
PERM1-202ENST00000433179 BAZ1BQ9UIG0 1483 aaKnown RBP21.18■□□□□ 0.98
PERM1-202ENST00000433179 FAM9AQ8IZU1 332 aaPredicted RBP21.15■□□□□ 0.98
PERM1-202ENST00000433179 CC2D2AQ9P2K1 1620 aa21■□□□□ 0.95
PERM1-202ENST00000433179 BIVM-ERCC5R4GMW8 1640 aa20.97■□□□□ 0.95
PERM1-202ENST00000433179 TRIM41Q8WV44 630 aa20.96■□□□□ 0.95
PERM1-202ENST00000433179 MYT1Q01538 1121 aa20.93■□□□□ 0.94
PERM1-202ENST00000433179 ABCC8Q09428 1581 aa20.91■□□□□ 0.94
PERM1-202ENST00000433179 CFTRP13569 1480 aa20.88■□□□□ 0.93
PERM1-202ENST00000433179 SYNJ1O43426 1573 aa20.86■□□□□ 0.93
PERM1-202ENST00000433179 TOP2BQ02880 1626 aa20.86■□□□□ 0.93
PERM1-202ENST00000433179 SCAF1Q9H7N4 1312 aaKnown RBP20.85■□□□□ 0.93
PERM1-202ENST00000433179 WRNQ14191 1432 aaPredicted RBP eCLIP20.71■□□□□ 0.91
PERM1-202ENST00000433179 EEA1Q15075 1411 aa20.7■□□□□ 0.9
PERM1-202ENST00000433179 KIF21BO75037 1637 aa20.63■□□□□ 0.89
PERM1-202ENST00000433179 CUX1P39880 1505 aa20.62■□□□□ 0.89
PERM1-202ENST00000433179 LAMC3Q9Y6N6 1575 aa20.59■□□□□ 0.89
PERM1-202ENST00000433179 TRIM26Q12899 539 aaPredicted RBP20.56■□□□□ 0.88
PERM1-202ENST00000433179 CADPSQ9ULU8 1353 aa20.54■□□□□ 0.88
PERM1-202ENST00000433179 SOGA1O94964 1423 aa20.48■□□□□ 0.87
PERM1-202ENST00000433179 WDR97A6NE52 1622 aa20.48■□□□□ 0.87
PERM1-202ENST00000433179 TTBK1Q5TCY1 1321 aaPredicted RBP20.47■□□□□ 0.87
PERM1-202ENST00000433179 RUSC2Q8N2Y8 1516 aa20.44■□□□□ 0.86
PERM1-202ENST00000433179 ERICH3Q5RHP9 1530 aa20.42■□□□□ 0.86
PERM1-202ENST00000433179 DNMBPQ6XZF7 1577 aa20.42■□□□□ 0.86
PERM1-202ENST00000433179 PRXQ9BXM0 1461 aa20.33■□□□□ 0.84
PERM1-202ENST00000433179 FANCD2Q9BXW9 1451 aa20.33■□□□□ 0.84
PERM1-202ENST00000433179 KIF21AQ7Z4S6 1674 aa20.32■□□□□ 0.84
PERM1-202ENST00000433179 CEP164Q9UPV0 1460 aa20.31■□□□□ 0.84
PERM1-202ENST00000433179 GOLGA3Q08378 1498 aa20.31■□□□□ 0.84
PERM1-202ENST00000433179 TNIKQ9UKE5 1360 aa20.31■□□□□ 0.84
PERM1-202ENST00000433179 ZEB1P37275 1124 aaPredicted RBP20.27■□□□□ 0.83
PERM1-202ENST00000433179 TOPBP1Q92547 1522 aa20.24■□□□□ 0.83
PERM1-202ENST00000433179 NESP48681 1621 aa20.23■□□□□ 0.83
PERM1-202ENST00000433179 ABCA10Q8WWZ4 1543 aa20.22■□□□□ 0.83
PERM1-202ENST00000433179 FGD5Q6ZNL6 1462 aa20.21■□□□□ 0.83
PERM1-202ENST00000433179 ABCA5Q8WWZ7 1642 aa20.21■□□□□ 0.83
PERM1-202ENST00000433179 URB2Q14146 1524 aaKnown RBP20.19■□□□□ 0.82
PERM1-202ENST00000433179 CSRNP3Q8WYN3 585 aa20.17■□□□□ 0.82
PERM1-202ENST00000433179 GTF3C3Q9Y5Q9 886 aa20.17■□□□□ 0.82
PERM1-202ENST00000433179 TARBP1Q13395 1621 aaKnown RBP20.16■□□□□ 0.82
PERM1-202ENST00000433179 ACIN1Q9UKV3 1341 aaKnown RBP20.15■□□□□ 0.82
PERM1-202ENST00000433179 NEUROD1Q13562 356 aa20.14■□□□□ 0.82
PERM1-202ENST00000433179 CUL7Q14999 1698 aa20.14■□□□□ 0.81
PERM1-202ENST00000433179 POLA1P09884 1462 aaPredicted RBP20.14■□□□□ 0.81
PERM1-202ENST00000433179 RAPGEF2Q9Y4G8 1499 aa20.13■□□□□ 0.81
PERM1-202ENST00000433179 KIF27Q86VH2 1401 aa20.13■□□□□ 0.81
PERM1-202ENST00000433179 CEP162Q5TB80 1403 aa20.12■□□□□ 0.81
PERM1-202ENST00000433179 RANGAP1P46060 587 aaPredicted RBP20.1■□□□□ 0.81
PERM1-202ENST00000433179 PDS5BQ9NTI5 1447 aa20.09■□□□□ 0.81
PERM1-202ENST00000433179 WDR62O43379 1518 aa20.08■□□□□ 0.81
PERM1-202ENST00000433179 UBTFP17480 764 aaKnown RBP20.07■□□□□ 0.8
PERM1-202ENST00000433179 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.06■□□□□ 0.8
PERM1-202ENST00000433179 THOC2Q8NI27 1593 aaKnown RBP20.03■□□□□ 0.8
PERM1-202ENST00000433179 CTTNBP2Q8WZ74 1663 aa20■□□□□ 0.79
PERM1-202ENST00000433179 IGF1RP08069 1367 aa19.99■□□□□ 0.79
PERM1-202ENST00000433179 PBRM1Q86U86 1689 aa19.99■□□□□ 0.79
PERM1-202ENST00000433179 DNAJC5BQ9UF47 199 aa19.98■□□□□ 0.79
PERM1-202ENST00000433179 MRC2Q9UBG0 1479 aa19.97■□□□□ 0.79
PERM1-202ENST00000433179 CUX2O14529 1486 aa19.96■□□□□ 0.79
PERM1-202ENST00000433179 CENPBP07199 599 aaPredicted RBP19.93■□□□□ 0.78
PERM1-202ENST00000433179 ARAP1Q96P48 1450 aa19.9■□□□□ 0.78
PERM1-202ENST00000433179 RAD54L2Q9Y4B4 1467 aa19.9■□□□□ 0.78
PERM1-202ENST00000433179 CCER1Q8TC90 406 aaPredicted RBP19.89■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms