RNA–Protein interactions for RNA: ENST00000456297.6

DNMT3B-206, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 2 BASIC

Gene DNMT3B, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-206ENST00000456297 NISCHQ9Y2I1 1504 aa28.99■■■□□ 2.23
DNMT3B-206ENST00000456297 CCDC180Q9P1Z9 1646 aa25.45■■□□□ 1.67
DNMT3B-206ENST00000456297 ABCC9O60706 1549 aa24.75■■□□□ 1.55
DNMT3B-206ENST00000456297 DCAF8L2P0C7V8 631 aa24.33■■□□□ 1.49
DNMT3B-206ENST00000456297 ZCCHC6Q5VYS8 1495 aaKnown RBP24.22■■□□□ 1.47
DNMT3B-206ENST00000456297 DCAF1Q9Y4B6 1507 aa23.87■■□□□ 1.41
DNMT3B-206ENST00000456297 NACADO15069 1562 aa23.86■■□□□ 1.41
DNMT3B-206ENST00000456297 RB1CC1Q8TDY2 1594 aa23.81■■□□□ 1.4
DNMT3B-206ENST00000456297 MYO15BQ96JP2 1530 aa23.77■■□□□ 1.4
DNMT3B-206ENST00000456297 SHROOM4Q9ULL8 1493 aa23.59■■□□□ 1.37
DNMT3B-206ENST00000456297 SCRIBQ14160 1630 aa23.48■■□□□ 1.35
DNMT3B-206ENST00000456297 UNC13AQ9UPW8 1703 aa23.35■■□□□ 1.33
DNMT3B-206ENST00000456297 PABPN1Q86U42 306 aaKnown RBP eCLIP23.29■■□□□ 1.32
DNMT3B-206ENST00000456297 SUPT5HO00267 1087 aaKnown RBP23.21■■□□□ 1.31
DNMT3B-206ENST00000456297 BICRAQ9NZM4 1560 aa23.14■■□□□ 1.29
DNMT3B-206ENST00000456297 CHIC1Q5VXU3 224 aa22.66■■□□□ 1.22
DNMT3B-206ENST00000456297 CECR2Q9BXF3 1484 aa22.65■■□□□ 1.22
DNMT3B-206ENST00000456297 EIF4G1Q04637 1599 aaKnown RBP22.5■■□□□ 1.19
DNMT3B-206ENST00000456297 MROH2BQ7Z745 1585 aa22.42■■□□□ 1.18
DNMT3B-206ENST00000456297 BAZ1AQ9NRL2 1556 aaPredicted RBP22.41■■□□□ 1.18
DNMT3B-206ENST00000456297 SMARCA4P51532 1647 aa22.4■■□□□ 1.18
DNMT3B-206ENST00000456297 DNAJC5BQ9UF47 199 aa22.39■■□□□ 1.17
DNMT3B-206ENST00000456297 HRCP23327 699 aa22.33■■□□□ 1.17
DNMT3B-206ENST00000456297 CC2D2AQ9P2K1 1620 aa22.32■■□□□ 1.16
DNMT3B-206ENST00000456297 RSF1Q96T23 1441 aaPredicted RBP22.31■■□□□ 1.16
DNMT3B-206ENST00000456297 WIZO95785 1651 aa22.22■■□□□ 1.15
DNMT3B-206ENST00000456297 PCGF6Q9BYE7 350 aa22.21■■□□□ 1.15
DNMT3B-206ENST00000456297 ATAD2BQ9ULI0 1458 aa22.19■■□□□ 1.14
DNMT3B-206ENST00000456297 SMARCA2P51531 1590 aa22.11■■□□□ 1.13
DNMT3B-206ENST00000456297 PEG3Q9GZU2 1588 aa22.09■■□□□ 1.13
DNMT3B-206ENST00000456297 LOC105371045A0A1W2PR82 267 aa22.07■■□□□ 1.12
DNMT3B-206ENST00000456297 NCAPD3P42695 1498 aa22.05■■□□□ 1.12
DNMT3B-206ENST00000456297 BAZ1BQ9UIG0 1483 aaKnown RBP22.04■■□□□ 1.12
DNMT3B-206ENST00000456297 PPARGC1BQ86YN6 1023 aaKnown RBP21.96■■□□□ 1.11
DNMT3B-206ENST00000456297 HMGXB3Q12766 1538 aa21.95■■□□□ 1.1
DNMT3B-206ENST00000456297 TOP2AP11388 1531 aaKnown RBP21.91■■□□□ 1.1
DNMT3B-206ENST00000456297 CCDC88BA6NC98 1476 aa21.73■■□□□ 1.07
DNMT3B-206ENST00000456297 TRIM26Q12899 539 aaPredicted RBP21.64■■□□□ 1.06
DNMT3B-206ENST00000456297 NESP48681 1621 aa21.56■■□□□ 1.04
DNMT3B-206ENST00000456297 TRIM41Q8WV44 630 aa21.53■■□□□ 1.04
DNMT3B-206ENST00000456297 CADPSQ9ULU8 1353 aa21.49■■□□□ 1.03
DNMT3B-206ENST00000456297 FAM9AQ8IZU1 332 aaPredicted RBP21.45■■□□□ 1.02
DNMT3B-206ENST00000456297 CFTRP13569 1480 aa21.43■■□□□ 1.02
DNMT3B-206ENST00000456297 LAMC3Q9Y6N6 1575 aa21.38■■□□□ 1.01
DNMT3B-206ENST00000456297 EHMT2Q96KQ7 1210 aa21.33■■□□□ 1
DNMT3B-206ENST00000456297 PDS5BQ9NTI5 1447 aa21.27■□□□□ 0.99
DNMT3B-206ENST00000456297 FANCD2Q9BXW9 1451 aa21.27■□□□□ 0.99
DNMT3B-206ENST00000456297 ERCC6Q03468 1493 aa21.25■□□□□ 0.99
DNMT3B-206ENST00000456297 KIF21AQ7Z4S6 1674 aa21.23■□□□□ 0.99
DNMT3B-206ENST00000456297 PRDM2Q13029 1718 aa21.22■□□□□ 0.99
DNMT3B-206ENST00000456297 CEP164Q9UPV0 1460 aa21.17■□□□□ 0.98
DNMT3B-206ENST00000456297 ZEB1P37275 1124 aaPredicted RBP21.17■□□□□ 0.98
DNMT3B-206ENST00000456297 ABCC8Q09428 1581 aa21.14■□□□□ 0.97
DNMT3B-206ENST00000456297 URB2Q14146 1524 aaKnown RBP21.04■□□□□ 0.96
DNMT3B-206ENST00000456297 MRC2Q9UBG0 1479 aa21.03■□□□□ 0.96
DNMT3B-206ENST00000456297 WRNQ14191 1432 aaPredicted RBP eCLIP21.02■□□□□ 0.95
DNMT3B-206ENST00000456297 THOC2Q8NI27 1593 aaKnown RBP20.99■□□□□ 0.95
DNMT3B-206ENST00000456297 CUX1P39880 1505 aa20.99■□□□□ 0.95
DNMT3B-206ENST00000456297 SYNJ1O43426 1573 aa20.96■□□□□ 0.95
DNMT3B-206ENST00000456297 TOPBP1Q92547 1522 aa20.96■□□□□ 0.95
DNMT3B-206ENST00000456297 DNMBPQ6XZF7 1577 aa20.93■□□□□ 0.94
DNMT3B-206ENST00000456297 WDR62O43379 1518 aa20.92■□□□□ 0.94
DNMT3B-206ENST00000456297 TOP2BQ02880 1626 aa20.87■□□□□ 0.93
DNMT3B-206ENST00000456297 FGD5Q6ZNL6 1462 aa20.85■□□□□ 0.93
DNMT3B-206ENST00000456297 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.84■□□□□ 0.93
DNMT3B-206ENST00000456297 BIVM-ERCC5R4GMW8 1640 aa20.83■□□□□ 0.93
DNMT3B-206ENST00000456297 POLA1P09884 1462 aaPredicted RBP20.83■□□□□ 0.92
DNMT3B-206ENST00000456297 RAD54L2Q9Y4B4 1467 aa20.81■□□□□ 0.92
DNMT3B-206ENST00000456297 CUX2O14529 1486 aa20.79■□□□□ 0.92
DNMT3B-206ENST00000456297 SCAF1Q9H7N4 1312 aaKnown RBP20.78■□□□□ 0.92
DNMT3B-206ENST00000456297 SOGA1O94964 1423 aa20.76■□□□□ 0.91
DNMT3B-206ENST00000456297 CCER1Q8TC90 406 aaPredicted RBP20.71■□□□□ 0.91
DNMT3B-206ENST00000456297 TTBK1Q5TCY1 1321 aaPredicted RBP20.69■□□□□ 0.9
DNMT3B-206ENST00000456297 TARBP1Q13395 1621 aaKnown RBP20.67■□□□□ 0.9
DNMT3B-206ENST00000456297 ZNF608Q9ULD9 1512 aaPredicted RBP20.67■□□□□ 0.9
DNMT3B-206ENST00000456297 TDRD9Q8NDG6 1382 aaKnown RBP20.67■□□□□ 0.9
DNMT3B-206ENST00000456297 IFT140Q96RY7 1462 aa20.67■□□□□ 0.9
DNMT3B-206ENST00000456297 CEP162Q5TB80 1403 aa20.66■□□□□ 0.9
DNMT3B-206ENST00000456297 AQRO60306 1485 aaKnown RBP eCLIP20.63■□□□□ 0.898e-7■■■■□ 22.3
DNMT3B-206ENST00000456297 ABCA10Q8WWZ4 1543 aa20.61■□□□□ 0.89
DNMT3B-206ENST00000456297 RUSC2Q8N2Y8 1516 aa20.6■□□□□ 0.89
DNMT3B-206ENST00000456297 WDR97A6NE52 1622 aa20.57■□□□□ 0.88
DNMT3B-206ENST00000456297 TNIKQ9UKE5 1360 aa20.56■□□□□ 0.88
DNMT3B-206ENST00000456297 EIF4G3O43432 1585 aaKnown RBP20.53■□□□□ 0.88
DNMT3B-206ENST00000456297 CSRNP3Q8WYN3 585 aa20.53■□□□□ 0.88
DNMT3B-206ENST00000456297 KIF27Q86VH2 1401 aa20.51■□□□□ 0.87
DNMT3B-206ENST00000456297 GAPVD1Q14C86 1478 aa20.51■□□□□ 0.87
DNMT3B-206ENST00000456297 ABCA5Q8WWZ7 1642 aa20.48■□□□□ 0.87
DNMT3B-206ENST00000456297 UBTFP17480 764 aaKnown RBP20.48■□□□□ 0.87
DNMT3B-206ENST00000456297 NEUROD1Q13562 356 aa20.45■□□□□ 0.87
DNMT3B-206ENST00000456297 EEA1Q15075 1411 aa20.45■□□□□ 0.86
DNMT3B-206ENST00000456297 DIEXFQ68CQ4 756 aaKnown RBP20.44■□□□□ 0.86
DNMT3B-206ENST00000456297 ACIN1Q9UKV3 1341 aaKnown RBP20.43■□□□□ 0.86
DNMT3B-206ENST00000456297 IGF1RP08069 1367 aa20.42■□□□□ 0.86
DNMT3B-206ENST00000456297 GRIN2BQ13224 1484 aa20.41■□□□□ 0.86
DNMT3B-206ENST00000456297 PBRM1Q86U86 1689 aa20.4■□□□□ 0.86
DNMT3B-206ENST00000456297 GOLGA3Q08378 1498 aa20.39■□□□□ 0.85
DNMT3B-206ENST00000456297 SNAPC4Q5SXM2 1469 aa20.39■□□□□ 0.85
DNMT3B-206ENST00000456297 FBLN2P98095 1184 aa20.38■□□□□ 0.85
DNMT3B-206ENST00000456297 PELP1Q8IZL8 1130 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms