RNA–Protein interactions for RNA: ENST00000405742.7

TCN2-202, Transcript of transcobalamin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCN2, Length 1,936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN2-202ENST00000405742 NISCHQ9Y2I1 1504 aa30.75■■■□□ 2.51
TCN2-202ENST00000405742 CCDC180Q9P1Z9 1646 aa26.55■■□□□ 1.84
TCN2-202ENST00000405742 ZCCHC6Q5VYS8 1495 aaKnown RBP25.96■■□□□ 1.75
TCN2-202ENST00000405742 SHROOM4Q9ULL8 1493 aa25.56■■□□□ 1.68
TCN2-202ENST00000405742 DCAF1Q9Y4B6 1507 aa25.41■■□□□ 1.66
TCN2-202ENST00000405742 DCAF8L2P0C7V8 631 aa25.25■■□□□ 1.63
TCN2-202ENST00000405742 SUPT5HO00267 1087 aaKnown RBP24.88■■□□□ 1.57
TCN2-202ENST00000405742 MYO15BQ96JP2 1530 aa24.87■■□□□ 1.57
TCN2-202ENST00000405742 ABCC9O60706 1549 aa24.59■■□□□ 1.53
TCN2-202ENST00000405742 NACADO15069 1562 aa24.57■■□□□ 1.52
TCN2-202ENST00000405742 SCRIBQ14160 1630 aa24.53■■□□□ 1.52
TCN2-202ENST00000405742 RB1CC1Q8TDY2 1594 aa24.23■■□□□ 1.47
TCN2-202ENST00000405742 CHIC1Q5VXU3 224 aa24.1■■□□□ 1.45
TCN2-202ENST00000405742 RSF1Q96T23 1441 aaPredicted RBP24.08■■□□□ 1.45
TCN2-202ENST00000405742 CECR2Q9BXF3 1484 aa23.86■■□□□ 1.41
TCN2-202ENST00000405742 UNC13AQ9UPW8 1703 aa23.82■■□□□ 1.4
TCN2-202ENST00000405742 MROH2BQ7Z745 1585 aa23.8■■□□□ 1.4
TCN2-202ENST00000405742 BAZ1AQ9NRL2 1556 aaPredicted RBP23.71■■□□□ 1.39
TCN2-202ENST00000405742 WIZO95785 1651 aa23.66■■□□□ 1.38
TCN2-202ENST00000405742 SMARCA4P51532 1647 aa23.54■■□□□ 1.36
TCN2-202ENST00000405742 BICRAQ9NZM4 1560 aa23.49■■□□□ 1.35
TCN2-202ENST00000405742 TOP2AP11388 1531 aaKnown RBP23.4■■□□□ 1.34
TCN2-202ENST00000405742 TRIM41Q8WV44 630 aa23.33■■□□□ 1.33
TCN2-202ENST00000405742 PABPN1Q86U42 306 aaKnown RBP eCLIP23.3■■□□□ 1.32
TCN2-202ENST00000405742 EIF4G1Q04637 1599 aaKnown RBP23.27■■□□□ 1.32
TCN2-202ENST00000405742 SMARCA2P51531 1590 aa23.22■■□□□ 1.31
TCN2-202ENST00000405742 LOC105371045A0A1W2PR82 267 aa23.21■■□□□ 1.31
TCN2-202ENST00000405742 PEG3Q9GZU2 1588 aa23.2■■□□□ 1.3
TCN2-202ENST00000405742 CCDC88BA6NC98 1476 aa23.17■■□□□ 1.3
TCN2-202ENST00000405742 ATAD2BQ9ULI0 1458 aa22.98■■□□□ 1.27
TCN2-202ENST00000405742 FAM9AQ8IZU1 332 aaPredicted RBP22.95■■□□□ 1.26
TCN2-202ENST00000405742 ABCC8Q09428 1581 aa22.92■■□□□ 1.26
TCN2-202ENST00000405742 BAZ1BQ9UIG0 1483 aaKnown RBP22.9■■□□□ 1.26
TCN2-202ENST00000405742 PCGF6Q9BYE7 350 aa22.82■■□□□ 1.24
TCN2-202ENST00000405742 HMGXB3Q12766 1538 aa22.7■■□□□ 1.22
TCN2-202ENST00000405742 WRNQ14191 1432 aaPredicted RBP eCLIP22.67■■□□□ 1.22
TCN2-202ENST00000405742 NCAPD3P42695 1498 aa22.66■■□□□ 1.22
TCN2-202ENST00000405742 TRIM26Q12899 539 aaPredicted RBP22.65■■□□□ 1.22
TCN2-202ENST00000405742 EEA1Q15075 1411 aa22.65■■□□□ 1.22
TCN2-202ENST00000405742 HRCP23327 699 aa22.64■■□□□ 1.21
TCN2-202ENST00000405742 EHMT2Q96KQ7 1210 aa22.63■■□□□ 1.21
TCN2-202ENST00000405742 SOGA1O94964 1423 aa22.58■■□□□ 1.21
TCN2-202ENST00000405742 SYNJ1O43426 1573 aa22.57■■□□□ 1.2
TCN2-202ENST00000405742 CSRNP3Q8WYN3 585 aa22.47■■□□□ 1.19
TCN2-202ENST00000405742 RUSC2Q8N2Y8 1516 aa22.47■■□□□ 1.19
TCN2-202ENST00000405742 TOP2BQ02880 1626 aa22.42■■□□□ 1.18
TCN2-202ENST00000405742 TNIKQ9UKE5 1360 aa22.41■■□□□ 1.18
TCN2-202ENST00000405742 BIVM-ERCC5R4GMW8 1640 aa22.39■■□□□ 1.18
TCN2-202ENST00000405742 GOLGA3Q08378 1498 aa22.39■■□□□ 1.17
TCN2-202ENST00000405742 CEP162Q5TB80 1403 aa22.35■■□□□ 1.17
TCN2-202ENST00000405742 KIF21BO75037 1637 aa22.35■■□□□ 1.17
TCN2-202ENST00000405742 CFTRP13569 1480 aa22.33■■□□□ 1.17
TCN2-202ENST00000405742 PRDM2Q13029 1718 aa22.32■■□□□ 1.16
TCN2-202ENST00000405742 CEP164Q9UPV0 1460 aa22.32■■□□□ 1.16
TCN2-202ENST00000405742 CC2D2AQ9P2K1 1620 aa22.26■■□□□ 1.15
TCN2-202ENST00000405742 UBTFP17480 764 aaKnown RBP22.26■■□□□ 1.15
TCN2-202ENST00000405742 CUX1P39880 1505 aa22.21■■□□□ 1.15
TCN2-202ENST00000405742 CADPSQ9ULU8 1353 aa22.13■■□□□ 1.13
TCN2-202ENST00000405742 RAPGEF2Q9Y4G8 1499 aa22.11■■□□□ 1.13
TCN2-202ENST00000405742 PPARGC1BQ86YN6 1023 aaKnown RBP22.1■■□□□ 1.13
TCN2-202ENST00000405742 ERICH3Q5RHP9 1530 aa22.08■■□□□ 1.12
TCN2-202ENST00000405742 ZEB1P37275 1124 aaPredicted RBP22.06■■□□□ 1.12
TCN2-202ENST00000405742 CLIP1P30622 1438 aa22.05■■□□□ 1.12
TCN2-202ENST00000405742 KIF27Q86VH2 1401 aa22.04■■□□□ 1.12
TCN2-202ENST00000405742 PRXQ9BXM0 1461 aa22.03■■□□□ 1.12
TCN2-202ENST00000405742 VPS8Q8N3P4 1428 aa21.94■■□□□ 1.1
TCN2-202ENST00000405742 FANCD2Q9BXW9 1451 aa21.91■■□□□ 1.1
TCN2-202ENST00000405742 FGD5Q6ZNL6 1462 aa21.88■■□□□ 1.09
TCN2-202ENST00000405742 CUX2O14529 1486 aa21.85■■□□□ 1.09
TCN2-202ENST00000405742 TTBK1Q5TCY1 1321 aaPredicted RBP21.83■■□□□ 1.09
TCN2-202ENST00000405742 DNMBPQ6XZF7 1577 aa21.83■■□□□ 1.08
TCN2-202ENST00000405742 LAMC3Q9Y6N6 1575 aa21.82■■□□□ 1.08
TCN2-202ENST00000405742 NESP48681 1621 aa21.77■■□□□ 1.08
TCN2-202ENST00000405742 IGF1RP08069 1367 aa21.75■■□□□ 1.07
TCN2-202ENST00000405742 APLP2Q06481 763 aa21.75■■□□□ 1.07
TCN2-202ENST00000405742 ARAP1Q96P48 1450 aa21.75■■□□□ 1.07
TCN2-202ENST00000405742 RANGAP1P46060 587 aaPredicted RBP21.74■■□□□ 1.07
TCN2-202ENST00000405742 TOPBP1Q92547 1522 aa21.74■■□□□ 1.07
TCN2-202ENST00000405742 ABCA10Q8WWZ4 1543 aa21.69■■□□□ 1.06
TCN2-202ENST00000405742 POLA1P09884 1462 aaPredicted RBP21.68■■□□□ 1.06
TCN2-202ENST00000405742 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.68■■□□□ 1.06
TCN2-202ENST00000405742 CARMIL1Q5VZK9 1371 aa21.67■■□□□ 1.06
TCN2-202ENST00000405742 CCER1Q8TC90 406 aaPredicted RBP21.67■■□□□ 1.06
TCN2-202ENST00000405742 ARHGAP35Q9NRY4 1499 aa21.64■■□□□ 1.05
TCN2-202ENST00000405742 RAD54L2Q9Y4B4 1467 aa21.62■■□□□ 1.05
TCN2-202ENST00000405742 PDS5BQ9NTI5 1447 aa21.62■■□□□ 1.05
TCN2-202ENST00000405742 URB2Q14146 1524 aaKnown RBP21.6■■□□□ 1.05
TCN2-202ENST00000405742 WDR97A6NE52 1622 aa21.59■■□□□ 1.05
TCN2-202ENST00000405742 CUL7Q14999 1698 aa21.58■■□□□ 1.05
TCN2-202ENST00000405742 KIF21AQ7Z4S6 1674 aa21.55■■□□□ 1.04
TCN2-202ENST00000405742 DNAJC5BQ9UF47 199 aa21.49■■□□□ 1.03
TCN2-202ENST00000405742 ABCA5Q8WWZ7 1642 aa21.48■■□□□ 1.03
TCN2-202ENST00000405742 CTTNBP2Q8WZ74 1663 aa21.46■■□□□ 1.03
TCN2-202ENST00000405742 MAP3K1Q13233 1512 aa21.44■■□□□ 1.02
TCN2-202ENST00000405742 HNRNPUL2Q1KMD3 747 aaKnown RBP21.43■■□□□ 1.02
TCN2-202ENST00000405742 KANK4Q5T7N3 995 aaPredicted RBP21.42■■□□□ 1.02
TCN2-202ENST00000405742 EFCAB5A4FU69 1503 aa21.41■■□□□ 1.02
TCN2-202ENST00000405742 FHAD1B1AJZ9 1412 aa21.4■■□□□ 1.02
TCN2-202ENST00000405742 TIAM1Q13009 1591 aa21.39■■□□□ 1.02
TCN2-202ENST00000405742 GAPVD1Q14C86 1478 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms