RNA–Protein interactions for RNA: ENST00000534700.5

PDXDC2P-206, Transcript of pyridoxal dependent decarboxylase domain containing 2, pseudogene, humanhuman

BASIC

Gene PDXDC2P, Length 1,315 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC2P-206ENST00000534700 NISCHQ9Y2I1 1504 aa33.31■■■□□ 2.92
PDXDC2P-206ENST00000534700 CCDC180Q9P1Z9 1646 aa29.43■■■□□ 2.3
PDXDC2P-206ENST00000534700 ABCC9O60706 1549 aa28.55■■■□□ 2.16
PDXDC2P-206ENST00000534700 ZCCHC6Q5VYS8 1495 aaKnown RBP27.79■■■□□ 2.04
PDXDC2P-206ENST00000534700 DCAF8L2P0C7V8 631 aa27.75■■■□□ 2.03
PDXDC2P-206ENST00000534700 NACADO15069 1562 aa27.61■■■□□ 2.01
PDXDC2P-206ENST00000534700 RB1CC1Q8TDY2 1594 aa27.56■■■□□ 2
PDXDC2P-206ENST00000534700 MYO15BQ96JP2 1530 aa27.54■■■□□ 2
PDXDC2P-206ENST00000534700 DCAF1Q9Y4B6 1507 aa27.54■■■□□ 2
PDXDC2P-206ENST00000534700 UNC13AQ9UPW8 1703 aa26.98■■□□□ 1.91
PDXDC2P-206ENST00000534700 SCRIBQ14160 1630 aa26.92■■□□□ 1.9
PDXDC2P-206ENST00000534700 PABPN1Q86U42 306 aaKnown RBP eCLIP26.77■■□□□ 1.88
PDXDC2P-206ENST00000534700 BICRAQ9NZM4 1560 aa26.76■■□□□ 1.87
PDXDC2P-206ENST00000534700 SHROOM4Q9ULL8 1493 aa26.54■■□□□ 1.84
PDXDC2P-206ENST00000534700 EIF4G1Q04637 1599 aaKnown RBP26■■□□□ 1.75
PDXDC2P-206ENST00000534700 DNAJC5BQ9UF47 199 aa25.99■■□□□ 1.75
PDXDC2P-206ENST00000534700 CECR2Q9BXF3 1484 aa25.94■■□□□ 1.74
PDXDC2P-206ENST00000534700 CC2D2AQ9P2K1 1620 aa25.83■■□□□ 1.73
PDXDC2P-206ENST00000534700 BAZ1AQ9NRL2 1556 aaPredicted RBP25.77■■□□□ 1.72
PDXDC2P-206ENST00000534700 SMARCA4P51532 1647 aa25.77■■□□□ 1.72
PDXDC2P-206ENST00000534700 MROH2BQ7Z745 1585 aa25.69■■□□□ 1.7
PDXDC2P-206ENST00000534700 ATAD2BQ9ULI0 1458 aa25.56■■□□□ 1.68
PDXDC2P-206ENST00000534700 SMARCA2P51531 1590 aa25.52■■□□□ 1.68
PDXDC2P-206ENST00000534700 RSF1Q96T23 1441 aaPredicted RBP25.51■■□□□ 1.67
PDXDC2P-206ENST00000534700 PEG3Q9GZU2 1588 aa25.5■■□□□ 1.67
PDXDC2P-206ENST00000534700 NCAPD3P42695 1498 aa25.49■■□□□ 1.67
PDXDC2P-206ENST00000534700 WIZO95785 1651 aa25.43■■□□□ 1.66
PDXDC2P-206ENST00000534700 HMGXB3Q12766 1538 aa25.37■■□□□ 1.65
PDXDC2P-206ENST00000534700 BAZ1BQ9UIG0 1483 aaKnown RBP25.35■■□□□ 1.65
PDXDC2P-206ENST00000534700 TOP2AP11388 1531 aaKnown RBP25.14■■□□□ 1.62
PDXDC2P-206ENST00000534700 SUPT5HO00267 1087 aaKnown RBP25.13■■□□□ 1.61
PDXDC2P-206ENST00000534700 CCDC88BA6NC98 1476 aa24.89■■□□□ 1.57
PDXDC2P-206ENST00000534700 NESP48681 1621 aa24.82■■□□□ 1.56
PDXDC2P-206ENST00000534700 CADPSQ9ULU8 1353 aa24.78■■□□□ 1.56
PDXDC2P-206ENST00000534700 LAMC3Q9Y6N6 1575 aa24.75■■□□□ 1.55
PDXDC2P-206ENST00000534700 CFTRP13569 1480 aa24.69■■□□□ 1.54
PDXDC2P-206ENST00000534700 PDS5BQ9NTI5 1447 aa24.59■■□□□ 1.53
PDXDC2P-206ENST00000534700 ERCC6Q03468 1493 aa24.56■■□□□ 1.52
PDXDC2P-206ENST00000534700 KIF21AQ7Z4S6 1674 aa24.5■■□□□ 1.51
PDXDC2P-206ENST00000534700 PRDM2Q13029 1718 aa24.5■■□□□ 1.51
PDXDC2P-206ENST00000534700 FANCD2Q9BXW9 1451 aa24.49■■□□□ 1.51
PDXDC2P-206ENST00000534700 CEP164Q9UPV0 1460 aa24.41■■□□□ 1.5
PDXDC2P-206ENST00000534700 THOC2Q8NI27 1593 aaKnown RBP24.33■■□□□ 1.48
PDXDC2P-206ENST00000534700 MRC2Q9UBG0 1479 aa24.31■■□□□ 1.48
PDXDC2P-206ENST00000534700 URB2Q14146 1524 aaKnown RBP24.23■■□□□ 1.47
PDXDC2P-206ENST00000534700 WDR62O43379 1518 aa24.22■■□□□ 1.47
PDXDC2P-206ENST00000534700 CUX2O14529 1486 aa24.17■■□□□ 1.46
PDXDC2P-206ENST00000534700 TOPBP1Q92547 1522 aa24.14■■□□□ 1.45
PDXDC2P-206ENST00000534700 ABCC8Q09428 1581 aa24.12■■□□□ 1.45
PDXDC2P-206ENST00000534700 DNMBPQ6XZF7 1577 aa24.12■■□□□ 1.45
PDXDC2P-206ENST00000534700 CUX1P39880 1505 aa24.08■■□□□ 1.45
PDXDC2P-206ENST00000534700 WRNQ14191 1432 aaPredicted RBP eCLIP24.02■■□□□ 1.44
PDXDC2P-206ENST00000534700 SYNJ1O43426 1573 aa23.95■■□□□ 1.43
PDXDC2P-206ENST00000534700 POLA1P09884 1462 aaPredicted RBP23.95■■□□□ 1.42
PDXDC2P-206ENST00000534700 FGD5Q6ZNL6 1462 aa23.93■■□□□ 1.42
PDXDC2P-206ENST00000534700 TOP2BQ02880 1626 aa23.93■■□□□ 1.42
PDXDC2P-206ENST00000534700 BIVM-ERCC5R4GMW8 1640 aa23.92■■□□□ 1.42
PDXDC2P-206ENST00000534700 IFT140Q96RY7 1462 aa23.89■■□□□ 1.41
PDXDC2P-206ENST00000534700 SOGA1O94964 1423 aa23.87■■□□□ 1.41
PDXDC2P-206ENST00000534700 RAD54L2Q9Y4B4 1467 aa23.86■■□□□ 1.41
PDXDC2P-206ENST00000534700 TARBP1Q13395 1621 aaKnown RBP23.84■■□□□ 1.41
PDXDC2P-206ENST00000534700 ZNF608Q9ULD9 1512 aaPredicted RBP23.79■■□□□ 1.4
PDXDC2P-206ENST00000534700 TDRD9Q8NDG6 1382 aaKnown RBP23.72■■□□□ 1.39
PDXDC2P-206ENST00000534700 ABCA10Q8WWZ4 1543 aa23.71■■□□□ 1.39
PDXDC2P-206ENST00000534700 TRIM41Q8WV44 630 aa23.7■■□□□ 1.38
PDXDC2P-206ENST00000534700 WDR97A6NE52 1622 aa23.7■■□□□ 1.38
PDXDC2P-206ENST00000534700 AQRO60306 1485 aaKnown RBP eCLIP23.7■■□□□ 1.384e-6■□□□□ 9.2
PDXDC2P-206ENST00000534700 EIF4G3O43432 1585 aaKnown RBP23.67■■□□□ 1.38
PDXDC2P-206ENST00000534700 CHIC1Q5VXU3 224 aa23.64■■□□□ 1.38
PDXDC2P-206ENST00000534700 GAPVD1Q14C86 1478 aa23.59■■□□□ 1.37
PDXDC2P-206ENST00000534700 ABCA5Q8WWZ7 1642 aa23.58■■□□□ 1.37
PDXDC2P-206ENST00000534700 GRIN2BQ13224 1484 aa23.53■■□□□ 1.36
PDXDC2P-206ENST00000534700 PBRM1Q86U86 1689 aa23.5■■□□□ 1.35
PDXDC2P-206ENST00000534700 KIF27Q86VH2 1401 aa23.5■■□□□ 1.35
PDXDC2P-206ENST00000534700 SNAPC4Q5SXM2 1469 aa23.46■■□□□ 1.35
PDXDC2P-206ENST00000534700 RUSC2Q8N2Y8 1516 aa23.43■■□□□ 1.34
PDXDC2P-206ENST00000534700 MAGI1Q96QZ7 1491 aaPredicted RBP23.42■■□□□ 1.34
PDXDC2P-206ENST00000534700 ERICH3Q5RHP9 1530 aa23.42■■□□□ 1.34
PDXDC2P-206ENST00000534700 IGF1RP08069 1367 aa23.4■■□□□ 1.34
PDXDC2P-206ENST00000534700 FBLN2P98095 1184 aa23.36■■□□□ 1.33
PDXDC2P-206ENST00000534700 SYNJ2O15056 1496 aa23.34■■□□□ 1.33
PDXDC2P-206ENST00000534700 CHMP7Q8WUX9 453 aaPredicted RBP23.33■■□□□ 1.33
PDXDC2P-206ENST00000534700 ADAMTS12P58397 1594 aa23.33■■□□□ 1.33
PDXDC2P-206ENST00000534700 CHD1O14646 1710 aa23.33■■□□□ 1.33
PDXDC2P-206ENST00000534700 FHAD1B1AJZ9 1412 aa23.32■■□□□ 1.32
PDXDC2P-206ENST00000534700 OSCARQ8IYS5 282 aa23.28■■□□□ 1.32
PDXDC2P-206ENST00000534700 CUL7Q14999 1698 aa23.26■■□□□ 1.31
PDXDC2P-206ENST00000534700 CARMIL1Q5VZK9 1371 aa23.25■■□□□ 1.31
PDXDC2P-206ENST00000534700 FAM9AQ8IZU1 332 aaPredicted RBP23.24■■□□□ 1.31
PDXDC2P-206ENST00000534700 EEA1Q15075 1411 aa23.24■■□□□ 1.31
PDXDC2P-206ENST00000534700 GRIN2AQ12879 1464 aa23.22■■□□□ 1.31
PDXDC2P-206ENST00000534700 CSRNP3Q8WYN3 585 aa23.22■■□□□ 1.31
PDXDC2P-206ENST00000534700 PRXQ9BXM0 1461 aa23.14■■□□□ 1.29
PDXDC2P-206ENST00000534700 RAPGEF2Q9Y4G8 1499 aa23.13■■□□□ 1.29
PDXDC2P-206ENST00000534700 DNAJC5Q9H3Z4 198 aa23.12■■□□□ 1.29
PDXDC2P-206ENST00000534700 NUP160Q12769 1436 aa23.12■■□□□ 1.29
PDXDC2P-206ENST00000534700 CEP170Q5SW79 1584 aa23.1■■□□□ 1.29
PDXDC2P-206ENST00000534700 CLASP1Q7Z460 1538 aa23.07■■□□□ 1.28
PDXDC2P-206ENST00000534700 KIF21BO75037 1637 aa22.97■■□□□ 1.27
PDXDC2P-206ENST00000534700 KIAA0586Q9BVV6 1533 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms