RNA–Protein interactions for RNA: ENST00000534700.5

PDXDC2P-206, Transcript of pyridoxal dependent decarboxylase domain containing 2, pseudogene, humanhuman

BASIC

Gene PDXDC2P, Length 1,315 nt, Biotype transcribed unprocessed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC2P-206ENST00000534700 NISCHQ9Y2I1 1504 aa33.31■■■□□ 2.92
PDXDC2P-206ENST00000534700 CCDC180Q9P1Z9 1646 aa29.43■■■□□ 2.3
PDXDC2P-206ENST00000534700 ABCC9O60706 1549 aa28.55■■■□□ 2.16
PDXDC2P-206ENST00000534700 ZCCHC6Q5VYS8 1495 aaKnown RBP27.79■■■□□ 2.04
PDXDC2P-206ENST00000534700 DCAF8L2P0C7V8 631 aa27.75■■■□□ 2.03
PDXDC2P-206ENST00000534700 NACADO15069 1562 aa27.61■■■□□ 2.01
PDXDC2P-206ENST00000534700 RB1CC1Q8TDY2 1594 aa27.56■■■□□ 2
PDXDC2P-206ENST00000534700 MYO15BQ96JP2 1530 aa27.54■■■□□ 2
PDXDC2P-206ENST00000534700 DCAF1Q9Y4B6 1507 aa27.54■■■□□ 2
PDXDC2P-206ENST00000534700 UNC13AQ9UPW8 1703 aa26.98■■□□□ 1.91
PDXDC2P-206ENST00000534700 SCRIBQ14160 1630 aa26.92■■□□□ 1.9
PDXDC2P-206ENST00000534700 PABPN1Q86U42 306 aaKnown RBP eCLIP26.77■■□□□ 1.88
PDXDC2P-206ENST00000534700 BICRAQ9NZM4 1560 aa26.76■■□□□ 1.87
PDXDC2P-206ENST00000534700 SHROOM4Q9ULL8 1493 aa26.54■■□□□ 1.84
PDXDC2P-206ENST00000534700 EIF4G1Q04637 1599 aaKnown RBP26■■□□□ 1.75
PDXDC2P-206ENST00000534700 DNAJC5BQ9UF47 199 aa25.99■■□□□ 1.75
PDXDC2P-206ENST00000534700 CECR2Q9BXF3 1484 aa25.94■■□□□ 1.74
PDXDC2P-206ENST00000534700 CC2D2AQ9P2K1 1620 aa25.83■■□□□ 1.73
PDXDC2P-206ENST00000534700 BAZ1AQ9NRL2 1556 aaPredicted RBP25.77■■□□□ 1.72
PDXDC2P-206ENST00000534700 SMARCA4P51532 1647 aa25.77■■□□□ 1.72
PDXDC2P-206ENST00000534700 MROH2BQ7Z745 1585 aa25.69■■□□□ 1.7
PDXDC2P-206ENST00000534700 ATAD2BQ9ULI0 1458 aa25.56■■□□□ 1.68
PDXDC2P-206ENST00000534700 SMARCA2P51531 1590 aa25.52■■□□□ 1.68
PDXDC2P-206ENST00000534700 RSF1Q96T23 1441 aaPredicted RBP25.51■■□□□ 1.67
PDXDC2P-206ENST00000534700 PEG3Q9GZU2 1588 aa25.5■■□□□ 1.67
PDXDC2P-206ENST00000534700 NCAPD3P42695 1498 aa25.49■■□□□ 1.67
PDXDC2P-206ENST00000534700 WIZO95785 1651 aa25.43■■□□□ 1.66
PDXDC2P-206ENST00000534700 HMGXB3Q12766 1538 aa25.37■■□□□ 1.65
PDXDC2P-206ENST00000534700 BAZ1BQ9UIG0 1483 aaKnown RBP25.35■■□□□ 1.65
PDXDC2P-206ENST00000534700 TOP2AP11388 1531 aaKnown RBP25.14■■□□□ 1.62
PDXDC2P-206ENST00000534700 SUPT5HO00267 1087 aaKnown RBP25.13■■□□□ 1.61
PDXDC2P-206ENST00000534700 CCDC88BA6NC98 1476 aa24.89■■□□□ 1.57
PDXDC2P-206ENST00000534700 NESP48681 1621 aa24.82■■□□□ 1.56
PDXDC2P-206ENST00000534700 CADPSQ9ULU8 1353 aa24.78■■□□□ 1.56
PDXDC2P-206ENST00000534700 LAMC3Q9Y6N6 1575 aa24.75■■□□□ 1.55
PDXDC2P-206ENST00000534700 CFTRP13569 1480 aa24.69■■□□□ 1.54
PDXDC2P-206ENST00000534700 PDS5BQ9NTI5 1447 aa24.59■■□□□ 1.53
PDXDC2P-206ENST00000534700 ERCC6Q03468 1493 aa24.56■■□□□ 1.52
PDXDC2P-206ENST00000534700 KIF21AQ7Z4S6 1674 aa24.5■■□□□ 1.51
PDXDC2P-206ENST00000534700 PRDM2Q13029 1718 aa24.5■■□□□ 1.51
PDXDC2P-206ENST00000534700 FANCD2Q9BXW9 1451 aa24.49■■□□□ 1.51
PDXDC2P-206ENST00000534700 CEP164Q9UPV0 1460 aa24.41■■□□□ 1.5
PDXDC2P-206ENST00000534700 THOC2Q8NI27 1593 aaKnown RBP24.33■■□□□ 1.48
PDXDC2P-206ENST00000534700 MRC2Q9UBG0 1479 aa24.31■■□□□ 1.48
PDXDC2P-206ENST00000534700 URB2Q14146 1524 aaKnown RBP24.23■■□□□ 1.47
PDXDC2P-206ENST00000534700 WDR62O43379 1518 aa24.22■■□□□ 1.47
PDXDC2P-206ENST00000534700 CUX2O14529 1486 aa24.17■■□□□ 1.46
PDXDC2P-206ENST00000534700 TOPBP1Q92547 1522 aa24.14■■□□□ 1.45
PDXDC2P-206ENST00000534700 ABCC8Q09428 1581 aa24.12■■□□□ 1.45
PDXDC2P-206ENST00000534700 DNMBPQ6XZF7 1577 aa24.12■■□□□ 1.45
PDXDC2P-206ENST00000534700 CUX1P39880 1505 aa24.08■■□□□ 1.45
PDXDC2P-206ENST00000534700 WRNQ14191 1432 aaPredicted RBP eCLIP24.02■■□□□ 1.44
PDXDC2P-206ENST00000534700 SYNJ1O43426 1573 aa23.95■■□□□ 1.43
PDXDC2P-206ENST00000534700 POLA1P09884 1462 aaPredicted RBP23.95■■□□□ 1.42
PDXDC2P-206ENST00000534700 FGD5Q6ZNL6 1462 aa23.93■■□□□ 1.42
PDXDC2P-206ENST00000534700 TOP2BQ02880 1626 aa23.93■■□□□ 1.42
PDXDC2P-206ENST00000534700 BIVM-ERCC5R4GMW8 1640 aa23.92■■□□□ 1.42
PDXDC2P-206ENST00000534700 IFT140Q96RY7 1462 aa23.89■■□□□ 1.41
PDXDC2P-206ENST00000534700 SOGA1O94964 1423 aa23.87■■□□□ 1.41
PDXDC2P-206ENST00000534700 RAD54L2Q9Y4B4 1467 aa23.86■■□□□ 1.41
PDXDC2P-206ENST00000534700 TARBP1Q13395 1621 aaKnown RBP23.84■■□□□ 1.41
PDXDC2P-206ENST00000534700 ZNF608Q9ULD9 1512 aaPredicted RBP23.79■■□□□ 1.4
PDXDC2P-206ENST00000534700 TDRD9Q8NDG6 1382 aaKnown RBP23.72■■□□□ 1.39
PDXDC2P-206ENST00000534700 ABCA10Q8WWZ4 1543 aa23.71■■□□□ 1.39
PDXDC2P-206ENST00000534700 TRIM41Q8WV44 630 aa23.7■■□□□ 1.38
PDXDC2P-206ENST00000534700 WDR97A6NE52 1622 aa23.7■■□□□ 1.38
PDXDC2P-206ENST00000534700 AQRO60306 1485 aaKnown RBP eCLIP23.7■■□□□ 1.384e-6■□□□□ 9.2
PDXDC2P-206ENST00000534700 EIF4G3O43432 1585 aaKnown RBP23.67■■□□□ 1.38
PDXDC2P-206ENST00000534700 CHIC1Q5VXU3 224 aa23.64■■□□□ 1.38
PDXDC2P-206ENST00000534700 GAPVD1Q14C86 1478 aa23.59■■□□□ 1.37
PDXDC2P-206ENST00000534700 ABCA5Q8WWZ7 1642 aa23.58■■□□□ 1.37
PDXDC2P-206ENST00000534700 GRIN2BQ13224 1484 aa23.53■■□□□ 1.36
PDXDC2P-206ENST00000534700 PBRM1Q86U86 1689 aa23.5■■□□□ 1.35
PDXDC2P-206ENST00000534700 KIF27Q86VH2 1401 aa23.5■■□□□ 1.35
PDXDC2P-206ENST00000534700 SNAPC4Q5SXM2 1469 aa23.46■■□□□ 1.35
PDXDC2P-206ENST00000534700 RUSC2Q8N2Y8 1516 aa23.43■■□□□ 1.34
PDXDC2P-206ENST00000534700 MAGI1Q96QZ7 1491 aaPredicted RBP23.42■■□□□ 1.34
PDXDC2P-206ENST00000534700 ERICH3Q5RHP9 1530 aa23.42■■□□□ 1.34
PDXDC2P-206ENST00000534700 IGF1RP08069 1367 aa23.4■■□□□ 1.34
PDXDC2P-206ENST00000534700 FBLN2P98095 1184 aa23.36■■□□□ 1.33
PDXDC2P-206ENST00000534700 SYNJ2O15056 1496 aa23.34■■□□□ 1.33
PDXDC2P-206ENST00000534700 CHMP7Q8WUX9 453 aaPredicted RBP23.33■■□□□ 1.33
PDXDC2P-206ENST00000534700 ADAMTS12P58397 1594 aa23.33■■□□□ 1.33
PDXDC2P-206ENST00000534700 CHD1O14646 1710 aa23.33■■□□□ 1.33
PDXDC2P-206ENST00000534700 FHAD1B1AJZ9 1412 aa23.32■■□□□ 1.32
PDXDC2P-206ENST00000534700 OSCARQ8IYS5 282 aa23.28■■□□□ 1.32
PDXDC2P-206ENST00000534700 CUL7Q14999 1698 aa23.26■■□□□ 1.31
PDXDC2P-206ENST00000534700 CARMIL1Q5VZK9 1371 aa23.25■■□□□ 1.31
PDXDC2P-206ENST00000534700 FAM9AQ8IZU1 332 aaPredicted RBP23.24■■□□□ 1.31
PDXDC2P-206ENST00000534700 EEA1Q15075 1411 aa23.24■■□□□ 1.31
PDXDC2P-206ENST00000534700 GRIN2AQ12879 1464 aa23.22■■□□□ 1.31
PDXDC2P-206ENST00000534700 CSRNP3Q8WYN3 585 aa23.22■■□□□ 1.31
PDXDC2P-206ENST00000534700 PRXQ9BXM0 1461 aa23.14■■□□□ 1.29
PDXDC2P-206ENST00000534700 RAPGEF2Q9Y4G8 1499 aa23.13■■□□□ 1.29
PDXDC2P-206ENST00000534700 DNAJC5Q9H3Z4 198 aa23.12■■□□□ 1.29
PDXDC2P-206ENST00000534700 NUP160Q12769 1436 aa23.12■■□□□ 1.29
PDXDC2P-206ENST00000534700 CEP170Q5SW79 1584 aa23.1■■□□□ 1.29
PDXDC2P-206ENST00000534700 CLASP1Q7Z460 1538 aa23.07■■□□□ 1.28
PDXDC2P-206ENST00000534700 KIF21BO75037 1637 aa22.97■■□□□ 1.27
PDXDC2P-206ENST00000534700 KIAA0586Q9BVV6 1533 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms