RNA–Protein interactions for RNA: ENST00000564903.1

COX4I1-208, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 2 BASIC

Gene COX4I1, Length 1,481 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-208ENST00000564903 NISCHQ9Y2I1 1504 aa33.24■■■□□ 2.91
COX4I1-208ENST00000564903 CCDC180Q9P1Z9 1646 aa29.22■■■□□ 2.27
COX4I1-208ENST00000564903 ABCC9O60706 1549 aa28.37■■■□□ 2.13
COX4I1-208ENST00000564903 DCAF8L2P0C7V8 631 aa27.81■■■□□ 2.04
COX4I1-208ENST00000564903 ZCCHC6Q5VYS8 1495 aaKnown RBP27.78■■■□□ 2.04
COX4I1-208ENST00000564903 DCAF1Q9Y4B6 1507 aa27.46■■□□□ 1.99
COX4I1-208ENST00000564903 NACADO15069 1562 aa27.44■■□□□ 1.98
COX4I1-208ENST00000564903 MYO15BQ96JP2 1530 aa27.38■■□□□ 1.97
COX4I1-208ENST00000564903 RB1CC1Q8TDY2 1594 aa27.37■■□□□ 1.97
COX4I1-208ENST00000564903 SCRIBQ14160 1630 aa26.85■■□□□ 1.89
COX4I1-208ENST00000564903 SHROOM4Q9ULL8 1493 aa26.73■■□□□ 1.87
COX4I1-208ENST00000564903 PABPN1Q86U42 306 aaKnown RBP eCLIP26.67■■□□□ 1.86
COX4I1-208ENST00000564903 UNC13AQ9UPW8 1703 aa26.66■■□□□ 1.86
COX4I1-208ENST00000564903 BICRAQ9NZM4 1560 aa26.53■■□□□ 1.84
COX4I1-208ENST00000564903 CECR2Q9BXF3 1484 aa25.92■■□□□ 1.74
COX4I1-208ENST00000564903 EIF4G1Q04637 1599 aaKnown RBP25.81■■□□□ 1.72
COX4I1-208ENST00000564903 BAZ1AQ9NRL2 1556 aaPredicted RBP25.72■■□□□ 1.71
COX4I1-208ENST00000564903 DNAJC5BQ9UF47 199 aa25.67■■□□□ 1.7
COX4I1-208ENST00000564903 SMARCA4P51532 1647 aa25.67■■□□□ 1.7
COX4I1-208ENST00000564903 MROH2BQ7Z745 1585 aa25.67■■□□□ 1.7
COX4I1-208ENST00000564903 CC2D2AQ9P2K1 1620 aa25.6■■□□□ 1.69
COX4I1-208ENST00000564903 RSF1Q96T23 1441 aaPredicted RBP25.55■■□□□ 1.68
COX4I1-208ENST00000564903 ATAD2BQ9ULI0 1458 aa25.46■■□□□ 1.67
COX4I1-208ENST00000564903 SMARCA2P51531 1590 aa25.4■■□□□ 1.66
COX4I1-208ENST00000564903 SUPT5HO00267 1087 aaKnown RBP25.39■■□□□ 1.65
COX4I1-208ENST00000564903 WIZO95785 1651 aa25.38■■□□□ 1.65
COX4I1-208ENST00000564903 PEG3Q9GZU2 1588 aa25.37■■□□□ 1.65
COX4I1-208ENST00000564903 NCAPD3P42695 1498 aa25.36■■□□□ 1.65
COX4I1-208ENST00000564903 BAZ1BQ9UIG0 1483 aaKnown RBP25.29■■□□□ 1.64
COX4I1-208ENST00000564903 HMGXB3Q12766 1538 aa25.22■■□□□ 1.63
COX4I1-208ENST00000564903 TOP2AP11388 1531 aaKnown RBP25.12■■□□□ 1.61
COX4I1-208ENST00000564903 CCDC88BA6NC98 1476 aa24.89■■□□□ 1.57
COX4I1-208ENST00000564903 CADPSQ9ULU8 1353 aa24.7■■□□□ 1.54
COX4I1-208ENST00000564903 NESP48681 1621 aa24.67■■□□□ 1.54
COX4I1-208ENST00000564903 CFTRP13569 1480 aa24.61■■□□□ 1.53
COX4I1-208ENST00000564903 LAMC3Q9Y6N6 1575 aa24.57■■□□□ 1.52
COX4I1-208ENST00000564903 PDS5BQ9NTI5 1447 aa24.46■■□□□ 1.51
COX4I1-208ENST00000564903 ERCC6Q03468 1493 aa24.4■■□□□ 1.5
COX4I1-208ENST00000564903 FANCD2Q9BXW9 1451 aa24.4■■□□□ 1.5
COX4I1-208ENST00000564903 CEP164Q9UPV0 1460 aa24.31■■□□□ 1.48
COX4I1-208ENST00000564903 KIF21AQ7Z4S6 1674 aa24.27■■□□□ 1.48
COX4I1-208ENST00000564903 PRDM2Q13029 1718 aa24.27■■□□□ 1.48
COX4I1-208ENST00000564903 MRC2Q9UBG0 1479 aa24.17■■□□□ 1.46
COX4I1-208ENST00000564903 ABCC8Q09428 1581 aa24.13■■□□□ 1.45
COX4I1-208ENST00000564903 URB2Q14146 1524 aaKnown RBP24.12■■□□□ 1.45
COX4I1-208ENST00000564903 THOC2Q8NI27 1593 aaKnown RBP24.09■■□□□ 1.45
COX4I1-208ENST00000564903 WRNQ14191 1432 aaPredicted RBP eCLIP24.08■■□□□ 1.44
COX4I1-208ENST00000564903 TOPBP1Q92547 1522 aa24.04■■□□□ 1.44
COX4I1-208ENST00000564903 WDR62O43379 1518 aa24.04■■□□□ 1.44
COX4I1-208ENST00000564903 CUX1P39880 1505 aa24.04■■□□□ 1.44
COX4I1-208ENST00000564903 DNMBPQ6XZF7 1577 aa24.02■■□□□ 1.44
COX4I1-208ENST00000564903 SYNJ1O43426 1573 aa23.96■■□□□ 1.43
COX4I1-208ENST00000564903 CHIC1Q5VXU3 224 aa23.92■■□□□ 1.42
COX4I1-208ENST00000564903 TRIM41Q8WV44 630 aa23.91■■□□□ 1.42
COX4I1-208ENST00000564903 TOP2BQ02880 1626 aa23.9■■□□□ 1.42
COX4I1-208ENST00000564903 CUX2O14529 1486 aa23.9■■□□□ 1.42
COX4I1-208ENST00000564903 FGD5Q6ZNL6 1462 aa23.9■■□□□ 1.42
COX4I1-208ENST00000564903 POLA1P09884 1462 aaPredicted RBP23.88■■□□□ 1.41
COX4I1-208ENST00000564903 BIVM-ERCC5R4GMW8 1640 aa23.86■■□□□ 1.41
COX4I1-208ENST00000564903 SOGA1O94964 1423 aa23.83■■□□□ 1.41
COX4I1-208ENST00000564903 RAD54L2Q9Y4B4 1467 aa23.82■■□□□ 1.4
COX4I1-208ENST00000564903 IFT140Q96RY7 1462 aa23.78■■□□□ 1.4
COX4I1-208ENST00000564903 TARBP1Q13395 1621 aaKnown RBP23.69■■□□□ 1.38
COX4I1-208ENST00000564903 TDRD9Q8NDG6 1382 aaKnown RBP23.68■■□□□ 1.38
COX4I1-208ENST00000564903 ZNF608Q9ULD9 1512 aaPredicted RBP23.68■■□□□ 1.38
COX4I1-208ENST00000564903 ABCA10Q8WWZ4 1543 aa23.65■■□□□ 1.38
COX4I1-208ENST00000564903 AQRO60306 1485 aaKnown RBP eCLIP23.63■■□□□ 1.376e-9■■■■■ 43.9
COX4I1-208ENST00000564903 WDR97A6NE52 1622 aa23.55■■□□□ 1.36
COX4I1-208ENST00000564903 KIF27Q86VH2 1401 aa23.54■■□□□ 1.36
COX4I1-208ENST00000564903 GAPVD1Q14C86 1478 aa23.53■■□□□ 1.36
COX4I1-208ENST00000564903 EIF4G3O43432 1585 aaKnown RBP23.52■■□□□ 1.36
COX4I1-208ENST00000564903 RUSC2Q8N2Y8 1516 aa23.52■■□□□ 1.36
COX4I1-208ENST00000564903 FAM9AQ8IZU1 332 aaPredicted RBP23.49■■□□□ 1.35
COX4I1-208ENST00000564903 ABCA5Q8WWZ7 1642 aa23.47■■□□□ 1.35
COX4I1-208ENST00000564903 GRIN2BQ13224 1484 aa23.45■■□□□ 1.35
COX4I1-208ENST00000564903 IGF1RP08069 1367 aa23.41■■□□□ 1.34
COX4I1-208ENST00000564903 SNAPC4Q5SXM2 1469 aa23.39■■□□□ 1.33
COX4I1-208ENST00000564903 ERICH3Q5RHP9 1530 aa23.36■■□□□ 1.33
COX4I1-208ENST00000564903 EEA1Q15075 1411 aa23.36■■□□□ 1.33
COX4I1-208ENST00000564903 CSRNP3Q8WYN3 585 aa23.35■■□□□ 1.33
COX4I1-208ENST00000564903 PBRM1Q86U86 1689 aa23.35■■□□□ 1.33
COX4I1-208ENST00000564903 FBLN2P98095 1184 aa23.32■■□□□ 1.32
COX4I1-208ENST00000564903 MAGI1Q96QZ7 1491 aaPredicted RBP23.31■■□□□ 1.32
COX4I1-208ENST00000564903 CHMP7Q8WUX9 453 aaPredicted RBP23.29■■□□□ 1.32
COX4I1-208ENST00000564903 CARMIL1Q5VZK9 1371 aa23.28■■□□□ 1.32
COX4I1-208ENST00000564903 FHAD1B1AJZ9 1412 aa23.27■■□□□ 1.32
COX4I1-208ENST00000564903 ADAMTS12P58397 1594 aa23.24■■□□□ 1.31
COX4I1-208ENST00000564903 SYNJ2O15056 1496 aa23.24■■□□□ 1.31
COX4I1-208ENST00000564903 EHMT2Q96KQ7 1210 aa23.2■■□□□ 1.3
COX4I1-208ENST00000564903 CUL7Q14999 1698 aa23.19■■□□□ 1.3
COX4I1-208ENST00000564903 PRXQ9BXM0 1461 aa23.19■■□□□ 1.3
COX4I1-208ENST00000564903 RAPGEF2Q9Y4G8 1499 aa23.16■■□□□ 1.3
COX4I1-208ENST00000564903 GRIN2AQ12879 1464 aa23.15■■□□□ 1.3
COX4I1-208ENST00000564903 OSCARQ8IYS5 282 aa23.1■■□□□ 1.29
COX4I1-208ENST00000564903 CHD1O14646 1710 aa23.09■■□□□ 1.29
COX4I1-208ENST00000564903 KIF21BO75037 1637 aa23.03■■□□□ 1.28
COX4I1-208ENST00000564903 NUP160Q12769 1436 aa23.02■■□□□ 1.28
COX4I1-208ENST00000564903 GOLGA3Q08378 1498 aa23.01■■□□□ 1.27
COX4I1-208ENST00000564903 UBTFP17480 764 aaKnown RBP23.01■■□□□ 1.27
COX4I1-208ENST00000564903 LOC105371045A0A1W2PR82 267 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms