RNA–Protein interactions for RNA: ENST00000447906.6

OTUD4-201, Transcript of OTU deubiquitinase 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene OTUD4, Length 3,829 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-201ENST00000447906 NISCHQ9Y2I1 1504 aa26.47■■□□□ 1.83
OTUD4-201ENST00000447906 DCAF8L2P0C7V8 631 aa24.68■■□□□ 1.54
OTUD4-201ENST00000447906 SHROOM4Q9ULL8 1493 aa24.21■■□□□ 1.47
OTUD4-201ENST00000447906 SUPT5HO00267 1087 aaKnown RBP24.17■■□□□ 1.46
OTUD4-201ENST00000447906 EHMT2Q96KQ7 1210 aa23.03■■□□□ 1.28
OTUD4-201ENST00000447906 PCGF6Q9BYE7 350 aa22.69■■□□□ 1.22
OTUD4-201ENST00000447906 FAM9AQ8IZU1 332 aaPredicted RBP22.65■■□□□ 1.22
OTUD4-201ENST00000447906 CHIC1Q5VXU3 224 aa22.37■■□□□ 1.17
OTUD4-201ENST00000447906 LOC105371045A0A1W2PR82 267 aa22.29■■□□□ 1.16
OTUD4-201ENST00000447906 TRIM41Q8WV44 630 aa22.21■■□□□ 1.15
OTUD4-201ENST00000447906 TTBK1Q5TCY1 1321 aaPredicted RBP22.19■■□□□ 1.14
OTUD4-201ENST00000447906 CCDC180Q9P1Z9 1646 aa22.19■■□□□ 1.14
OTUD4-201ENST00000447906 ZCCHC6Q5VYS8 1495 aaKnown RBP22.13■■□□□ 1.13
OTUD4-201ENST00000447906 PPARGC1BQ86YN6 1023 aaKnown RBP22.06■■□□□ 1.12
OTUD4-201ENST00000447906 ABCC9O60706 1549 aa21.93■■□□□ 1.1
OTUD4-201ENST00000447906 HRCP23327 699 aa21.88■■□□□ 1.09
OTUD4-201ENST00000447906 RANGAP1P46060 587 aaPredicted RBP21.8■■□□□ 1.08
OTUD4-201ENST00000447906 TRIM26Q12899 539 aaPredicted RBP21.68■■□□□ 1.06
OTUD4-201ENST00000447906 UBTFP17480 764 aaKnown RBP21.58■■□□□ 1.05
OTUD4-201ENST00000447906 CCER1Q8TC90 406 aaPredicted RBP21.58■■□□□ 1.04
OTUD4-201ENST00000447906 APLP2Q06481 763 aa21.49■■□□□ 1.03
OTUD4-201ENST00000447906 MYO15BQ96JP2 1530 aa21.42■■□□□ 1.02
OTUD4-201ENST00000447906 ZEB1P37275 1124 aaPredicted RBP21.41■■□□□ 1.02
OTUD4-201ENST00000447906 SCRIBQ14160 1630 aa21.39■■□□□ 1.01
OTUD4-201ENST00000447906 DCAF1Q9Y4B6 1507 aa21.36■■□□□ 1.01
OTUD4-201ENST00000447906 PABPN1Q86U42 306 aaKnown RBP eCLIP21.33■■□□□ 1.01
OTUD4-201ENST00000447906 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.26■□□□□ 0.99
OTUD4-201ENST00000447906 YTHDC1Q96MU7 727 aaKnown RBP21.15■□□□□ 0.98
OTUD4-201ENST00000447906 HNRNPUL2Q1KMD3 747 aaKnown RBP21.09■□□□□ 0.97
OTUD4-201ENST00000447906 ATP1B4Q9UN42 357 aaPredicted RBP21.09■□□□□ 0.97
OTUD4-201ENST00000447906 NACADO15069 1562 aa21.06■□□□□ 0.96
OTUD4-201ENST00000447906 RSF1Q96T23 1441 aaPredicted RBP20.99■□□□□ 0.95
OTUD4-201ENST00000447906 RB1CC1Q8TDY2 1594 aa20.95■□□□□ 0.94
OTUD4-201ENST00000447906 ITGAEP38570 1179 aa20.92■□□□□ 0.94
OTUD4-201ENST00000447906 CENPBP07199 599 aaPredicted RBP20.9■□□□□ 0.94
OTUD4-201ENST00000447906 CECR2Q9BXF3 1484 aa20.77■□□□□ 0.92
OTUD4-201ENST00000447906 DIEXFQ68CQ4 756 aaKnown RBP20.73■□□□□ 0.91
OTUD4-201ENST00000447906 CSRNP3Q8WYN3 585 aa20.73■□□□□ 0.91
OTUD4-201ENST00000447906 PELP1Q8IZL8 1130 aaKnown RBP20.59■□□□□ 0.89
OTUD4-201ENST00000447906 GTF3C3Q9Y5Q9 886 aa20.56■□□□□ 0.88
OTUD4-201ENST00000447906 MROH2BQ7Z745 1585 aa20.56■□□□□ 0.88
OTUD4-201ENST00000447906 BAZ1AQ9NRL2 1556 aaPredicted RBP20.52■□□□□ 0.88
OTUD4-201ENST00000447906 SCAF1Q9H7N4 1312 aaKnown RBP20.49■□□□□ 0.87
OTUD4-201ENST00000447906 P3H3Q8IVL6 736 aa20.38■□□□□ 0.85
OTUD4-201ENST00000447906 NEUROD1Q13562 356 aa20.36■□□□□ 0.85
OTUD4-201ENST00000447906 FAM50AQ14320 339 aaKnown RBP20.35■□□□□ 0.85
OTUD4-201ENST00000447906 ZNF316A6NFI3 1004 aaPredicted RBP20.33■□□□□ 0.85
OTUD4-201ENST00000447906 WIZO95785 1651 aa20.31■□□□□ 0.84
OTUD4-201ENST00000447906 ACIN1Q9UKV3 1341 aaKnown RBP20.3■□□□□ 0.84
OTUD4-201ENST00000447906 CEP162Q5TB80 1403 aa20.22■□□□□ 0.83
OTUD4-201ENST00000447906 CNGB1Q14028 1251 aaPredicted RBP20.21■□□□□ 0.83
OTUD4-201ENST00000447906 SOGA1O94964 1423 aa20.21■□□□□ 0.83
OTUD4-201ENST00000447906 BAZ1BQ9UIG0 1483 aaKnown RBP20.2■□□□□ 0.82
OTUD4-201ENST00000447906 CCDC88BA6NC98 1476 aa20.19■□□□□ 0.82
OTUD4-201ENST00000447906 ABCC8Q09428 1581 aa20.12■□□□□ 0.81
OTUD4-201ENST00000447906 ARID3CA6NKF2 412 aa20.11■□□□□ 0.81
OTUD4-201ENST00000447906 WRNQ14191 1432 aaPredicted RBP eCLIP20.11■□□□□ 0.81
OTUD4-201ENST00000447906 SMARCA4P51532 1647 aa20.08■□□□□ 0.81
OTUD4-201ENST00000447906 TOP2AP11388 1531 aaKnown RBP20.08■□□□□ 0.81
OTUD4-201ENST00000447906 BCANQ96GW7 911 aa20.08■□□□□ 0.81
OTUD4-201ENST00000447906 CLIP1P30622 1438 aa20.08■□□□□ 0.8
OTUD4-201ENST00000447906 POLR3GLQ9BT43 218 aa20.07■□□□□ 0.8
OTUD4-201ENST00000447906 NEFLP07196 543 aa20.05■□□□□ 0.8
OTUD4-201ENST00000447906 MIER1Q8N108 512 aa20.03■□□□□ 0.8
OTUD4-201ENST00000447906 TNIKQ9UKE5 1360 aa20.01■□□□□ 0.79
OTUD4-201ENST00000447906 EEA1Q15075 1411 aa20■□□□□ 0.79
OTUD4-201ENST00000447906 TRIM52Q96A61 297 aa19.96■□□□□ 0.79
OTUD4-201ENST00000447906 GOLGA3Q08378 1498 aa19.95■□□□□ 0.78
OTUD4-201ENST00000447906 ATAD2BQ9ULI0 1458 aa19.93■□□□□ 0.78
OTUD4-201ENST00000447906 SMARCA2P51531 1590 aa19.93■□□□□ 0.78
OTUD4-201ENST00000447906 HIRIP3Q9BW71 556 aaPredicted RBP19.9■□□□□ 0.78
OTUD4-201ENST00000447906 RUSC2Q8N2Y8 1516 aa19.89■□□□□ 0.78
OTUD4-201ENST00000447906 DDX10Q13206 875 aaKnown RBP19.83■□□□□ 0.76
OTUD4-201ENST00000447906 FBLN2P98095 1184 aa19.81■□□□□ 0.76
OTUD4-201ENST00000447906 CEP164Q9UPV0 1460 aa19.77■□□□□ 0.76
OTUD4-201ENST00000447906 KANK4Q5T7N3 995 aaPredicted RBP19.76■□□□□ 0.75
OTUD4-201ENST00000447906 ERICH6Q7L0X2 663 aa19.76■□□□□ 0.75
OTUD4-201ENST00000447906 ZNF326Q5BKZ1 582 aaKnown RBP19.75■□□□□ 0.75
OTUD4-201ENST00000447906 CHIC2Q9UKJ5 165 aa19.74■□□□□ 0.75
OTUD4-201ENST00000447906 ANP32CO43423 234 aa19.71■□□□□ 0.75
OTUD4-201ENST00000447906 KIF27Q86VH2 1401 aa19.7■□□□□ 0.74
OTUD4-201ENST00000447906 BICRAQ9NZM4 1560 aa19.69■□□□□ 0.74
OTUD4-201ENST00000447906 MYT1Q01538 1121 aa19.65■□□□□ 0.74
OTUD4-201ENST00000447906 SIN3AQ96ST3 1273 aa19.65■□□□□ 0.74
OTUD4-201ENST00000447906 ZNF777Q9ULD5 760 aaPredicted RBP19.62■□□□□ 0.73
OTUD4-201ENST00000447906 MYT1LQ9UL68 1186 aa19.6■□□□□ 0.73
OTUD4-201ENST00000447906 VPS8Q8N3P4 1428 aa19.58■□□□□ 0.72
OTUD4-201ENST00000447906 RAPGEF2Q9Y4G8 1499 aa19.57■□□□□ 0.72
OTUD4-201ENST00000447906 UNC13AQ9UPW8 1703 aa19.57■□□□□ 0.72
OTUD4-201ENST00000447906 NCAPD3P42695 1498 aa19.55■□□□□ 0.72
OTUD4-201ENST00000447906 TONSLQ96HA7 1378 aa19.55■□□□□ 0.72
OTUD4-201ENST00000447906 FKBP8Q14318 412 aa19.55■□□□□ 0.72
OTUD4-201ENST00000447906 RRP7BPQ9NSQ0 103 aa19.55■□□□□ 0.72
OTUD4-201ENST00000447906 CADPSQ9ULU8 1353 aa19.53■□□□□ 0.72
OTUD4-201ENST00000447906 EIF4G1Q04637 1599 aaKnown RBP19.53■□□□□ 0.72
OTUD4-201ENST00000447906 MTUS2Q5JR59 1369 aa19.52■□□□□ 0.72
OTUD4-201ENST00000447906 CUX2O14529 1486 aa19.52■□□□□ 0.71
OTUD4-201ENST00000447906 CCNB3Q8WWL7 1395 aa19.46■□□□□ 0.71
OTUD4-201ENST00000447906 CARMIL1Q5VZK9 1371 aa19.45■□□□□ 0.7
OTUD4-201ENST00000447906 HNRNPUQ00839 825 aaKnown RBP eCLIP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms