RNA–Protein interactions for RNA: ENST00000262942.9

ARPC1A-201, Transcript of actin related protein 2/3 complex subunit 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARPC1A, Length 1,565 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1A-201ENST00000262942 NISCHQ9Y2I1 1504 aa33.82■■■■□ 3
ARPC1A-201ENST00000262942 CCDC180Q9P1Z9 1646 aa30■■■□□ 2.39
ARPC1A-201ENST00000262942 ABCC9O60706 1549 aa28.74■■■□□ 2.19
ARPC1A-201ENST00000262942 ZCCHC6Q5VYS8 1495 aaKnown RBP28.31■■■□□ 2.12
ARPC1A-201ENST00000262942 DCAF1Q9Y4B6 1507 aa28.01■■■□□ 2.07
ARPC1A-201ENST00000262942 NACADO15069 1562 aa27.95■■■□□ 2.06
ARPC1A-201ENST00000262942 MYO15BQ96JP2 1530 aa27.92■■■□□ 2.06
ARPC1A-201ENST00000262942 RB1CC1Q8TDY2 1594 aa27.88■■■□□ 2.05
ARPC1A-201ENST00000262942 DCAF8L2P0C7V8 631 aa27.84■■■□□ 2.05
ARPC1A-201ENST00000262942 UNC13AQ9UPW8 1703 aa27.56■■■□□ 2
ARPC1A-201ENST00000262942 SCRIBQ14160 1630 aa27.37■■□□□ 1.97
ARPC1A-201ENST00000262942 BICRAQ9NZM4 1560 aa27.13■■□□□ 1.93
ARPC1A-201ENST00000262942 SHROOM4Q9ULL8 1493 aa26.93■■□□□ 1.9
ARPC1A-201ENST00000262942 PABPN1Q86U42 306 aaKnown RBP eCLIP26.84■■□□□ 1.89
ARPC1A-201ENST00000262942 EIF4G1Q04637 1599 aaKnown RBP26.31■■□□□ 1.8
ARPC1A-201ENST00000262942 CECR2Q9BXF3 1484 aa26.3■■□□□ 1.8
ARPC1A-201ENST00000262942 SMARCA4P51532 1647 aa26.23■■□□□ 1.79
ARPC1A-201ENST00000262942 BAZ1AQ9NRL2 1556 aaPredicted RBP26.18■■□□□ 1.78
ARPC1A-201ENST00000262942 MROH2BQ7Z745 1585 aa26.11■■□□□ 1.77
ARPC1A-201ENST00000262942 CC2D2AQ9P2K1 1620 aa26.11■■□□□ 1.77
ARPC1A-201ENST00000262942 PEG3Q9GZU2 1588 aa25.94■■□□□ 1.74
ARPC1A-201ENST00000262942 WIZO95785 1651 aa25.94■■□□□ 1.74
ARPC1A-201ENST00000262942 RSF1Q96T23 1441 aaPredicted RBP25.9■■□□□ 1.74
ARPC1A-201ENST00000262942 DNAJC5BQ9UF47 199 aa25.9■■□□□ 1.74
ARPC1A-201ENST00000262942 SMARCA2P51531 1590 aa25.85■■□□□ 1.73
ARPC1A-201ENST00000262942 ATAD2BQ9ULI0 1458 aa25.85■■□□□ 1.73
ARPC1A-201ENST00000262942 HMGXB3Q12766 1538 aa25.75■■□□□ 1.71
ARPC1A-201ENST00000262942 NCAPD3P42695 1498 aa25.72■■□□□ 1.71
ARPC1A-201ENST00000262942 BAZ1BQ9UIG0 1483 aaKnown RBP25.66■■□□□ 1.7
ARPC1A-201ENST00000262942 TOP2AP11388 1531 aaKnown RBP25.61■■□□□ 1.69
ARPC1A-201ENST00000262942 SUPT5HO00267 1087 aaKnown RBP25.48■■□□□ 1.67
ARPC1A-201ENST00000262942 CCDC88BA6NC98 1476 aa25.25■■□□□ 1.63
ARPC1A-201ENST00000262942 PRDM2Q13029 1718 aa25.14■■□□□ 1.62
ARPC1A-201ENST00000262942 NESP48681 1621 aa25.06■■□□□ 1.6
ARPC1A-201ENST00000262942 LAMC3Q9Y6N6 1575 aa25.06■■□□□ 1.6
ARPC1A-201ENST00000262942 CFTRP13569 1480 aa24.97■■□□□ 1.59
ARPC1A-201ENST00000262942 CADPSQ9ULU8 1353 aa24.96■■□□□ 1.59
ARPC1A-201ENST00000262942 KIF21AQ7Z4S6 1674 aa24.94■■□□□ 1.58
ARPC1A-201ENST00000262942 FANCD2Q9BXW9 1451 aa24.74■■□□□ 1.55
ARPC1A-201ENST00000262942 PDS5BQ9NTI5 1447 aa24.73■■□□□ 1.55
ARPC1A-201ENST00000262942 THOC2Q8NI27 1593 aaKnown RBP24.68■■□□□ 1.54
ARPC1A-201ENST00000262942 CEP164Q9UPV0 1460 aa24.67■■□□□ 1.54
ARPC1A-201ENST00000262942 ERCC6Q03468 1493 aa24.67■■□□□ 1.54
ARPC1A-201ENST00000262942 ABCC8Q09428 1581 aa24.57■■□□□ 1.52
ARPC1A-201ENST00000262942 MRC2Q9UBG0 1479 aa24.54■■□□□ 1.52
ARPC1A-201ENST00000262942 URB2Q14146 1524 aaKnown RBP24.53■■□□□ 1.52
ARPC1A-201ENST00000262942 WDR62O43379 1518 aa24.51■■□□□ 1.51
ARPC1A-201ENST00000262942 DNMBPQ6XZF7 1577 aa24.49■■□□□ 1.51
ARPC1A-201ENST00000262942 BIVM-ERCC5R4GMW8 1640 aa24.47■■□□□ 1.51
ARPC1A-201ENST00000262942 CUX1P39880 1505 aa24.47■■□□□ 1.51
ARPC1A-201ENST00000262942 SYNJ1O43426 1573 aa24.46■■□□□ 1.51
ARPC1A-201ENST00000262942 TOPBP1Q92547 1522 aa24.44■■□□□ 1.5
ARPC1A-201ENST00000262942 TOP2BQ02880 1626 aa24.4■■□□□ 1.5
ARPC1A-201ENST00000262942 WRNQ14191 1432 aaPredicted RBP eCLIP24.38■■□□□ 1.49
ARPC1A-201ENST00000262942 FGD5Q6ZNL6 1462 aa24.27■■□□□ 1.48
ARPC1A-201ENST00000262942 CUX2O14529 1486 aa24.27■■□□□ 1.48
ARPC1A-201ENST00000262942 POLA1P09884 1462 aaPredicted RBP24.26■■□□□ 1.47
ARPC1A-201ENST00000262942 WDR97A6NE52 1622 aa24.26■■□□□ 1.47
ARPC1A-201ENST00000262942 TARBP1Q13395 1621 aaKnown RBP24.23■■□□□ 1.47
ARPC1A-201ENST00000262942 RAD54L2Q9Y4B4 1467 aa24.14■■□□□ 1.46
ARPC1A-201ENST00000262942 IFT140Q96RY7 1462 aa24.11■■□□□ 1.45
ARPC1A-201ENST00000262942 CHIC1Q5VXU3 224 aa24.1■■□□□ 1.45
ARPC1A-201ENST00000262942 SOGA1O94964 1423 aa24.07■■□□□ 1.44
ARPC1A-201ENST00000262942 ABCA10Q8WWZ4 1543 aa24.05■■□□□ 1.44
ARPC1A-201ENST00000262942 EIF4G3O43432 1585 aaKnown RBP24.04■■□□□ 1.44
ARPC1A-201ENST00000262942 ABCA5Q8WWZ7 1642 aa24.03■■□□□ 1.44
ARPC1A-201ENST00000262942 ZNF608Q9ULD9 1512 aaPredicted RBP24.02■■□□□ 1.44
ARPC1A-201ENST00000262942 PBRM1Q86U86 1689 aa24.01■■□□□ 1.43
ARPC1A-201ENST00000262942 TRIM41Q8WV44 630 aa24.01■■□□□ 1.43
ARPC1A-201ENST00000262942 AQRO60306 1485 aaKnown RBP eCLIP23.89■■□□□ 1.417e-6■■■□□ 14.6
ARPC1A-201ENST00000262942 TDRD9Q8NDG6 1382 aaKnown RBP23.88■■□□□ 1.41
ARPC1A-201ENST00000262942 RUSC2Q8N2Y8 1516 aa23.86■■□□□ 1.41
ARPC1A-201ENST00000262942 GAPVD1Q14C86 1478 aa23.85■■□□□ 1.41
ARPC1A-201ENST00000262942 KIF27Q86VH2 1401 aa23.8■■□□□ 1.4
ARPC1A-201ENST00000262942 ERICH3Q5RHP9 1530 aa23.78■■□□□ 1.4
ARPC1A-201ENST00000262942 GRIN2BQ13224 1484 aa23.77■■□□□ 1.4
ARPC1A-201ENST00000262942 ADAMTS12P58397 1594 aa23.74■■□□□ 1.39
ARPC1A-201ENST00000262942 CHD1O14646 1710 aa23.74■■□□□ 1.39
ARPC1A-201ENST00000262942 CUL7Q14999 1698 aa23.73■■□□□ 1.39
ARPC1A-201ENST00000262942 SNAPC4Q5SXM2 1469 aa23.73■■□□□ 1.39
ARPC1A-201ENST00000262942 MAGI1Q96QZ7 1491 aaPredicted RBP23.68■■□□□ 1.38
ARPC1A-201ENST00000262942 EEA1Q15075 1411 aa23.66■■□□□ 1.38
ARPC1A-201ENST00000262942 IGF1RP08069 1367 aa23.64■■□□□ 1.37
ARPC1A-201ENST00000262942 SYNJ2O15056 1496 aa23.57■■□□□ 1.36
ARPC1A-201ENST00000262942 FHAD1B1AJZ9 1412 aa23.56■■□□□ 1.36
ARPC1A-201ENST00000262942 FAM9AQ8IZU1 332 aaPredicted RBP23.55■■□□□ 1.36
ARPC1A-201ENST00000262942 KIF21BO75037 1637 aa23.55■■□□□ 1.36
ARPC1A-201ENST00000262942 PRXQ9BXM0 1461 aa23.53■■□□□ 1.36
ARPC1A-201ENST00000262942 GRIN2AQ12879 1464 aa23.51■■□□□ 1.35
ARPC1A-201ENST00000262942 CARMIL1Q5VZK9 1371 aa23.5■■□□□ 1.35
ARPC1A-201ENST00000262942 CSRNP3Q8WYN3 585 aa23.49■■□□□ 1.35
ARPC1A-201ENST00000262942 CTTNBP2Q8WZ74 1663 aa23.47■■□□□ 1.35
ARPC1A-201ENST00000262942 RAPGEF2Q9Y4G8 1499 aa23.46■■□□□ 1.35
ARPC1A-201ENST00000262942 CEP170Q5SW79 1584 aa23.46■■□□□ 1.35
ARPC1A-201ENST00000262942 CHMP7Q8WUX9 453 aaPredicted RBP23.39■■□□□ 1.33
ARPC1A-201ENST00000262942 FBLN2P98095 1184 aa23.38■■□□□ 1.33
ARPC1A-201ENST00000262942 NUP160Q12769 1436 aa23.37■■□□□ 1.33
ARPC1A-201ENST00000262942 CLASP1Q7Z460 1538 aa23.37■■□□□ 1.33
ARPC1A-201ENST00000262942 GOLGA3Q08378 1498 aa23.33■■□□□ 1.33
ARPC1A-201ENST00000262942 SHROOM2Q13796 1616 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms