RNA–Protein interactions for RNA: ENST00000440994.6

FRMD1-205, Transcript of FERM domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene FRMD1, Length 2,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD1-205ENST00000440994 NISCHQ9Y2I1 1504 aa26■■□□□ 1.75
FRMD1-205ENST00000440994 SHROOM4Q9ULL8 1493 aa22.44■■□□□ 1.18
FRMD1-205ENST00000440994 DCAF8L2P0C7V8 631 aa22.32■■□□□ 1.16
FRMD1-205ENST00000440994 CCDC180Q9P1Z9 1646 aa21.98■■□□□ 1.11
FRMD1-205ENST00000440994 SUPT5HO00267 1087 aaKnown RBP21.87■■□□□ 1.09
FRMD1-205ENST00000440994 ZCCHC6Q5VYS8 1495 aaKnown RBP21.86■■□□□ 1.09
FRMD1-205ENST00000440994 PELP1Q8IZL8 1130 aaKnown RBP21.78■■□□□ 1.08
FRMD1-205ENST00000440994 HRCP23327 699 aa21.63■■□□□ 1.05
FRMD1-205ENST00000440994 PPARGC1BQ86YN6 1023 aaKnown RBP21.24■□□□□ 0.99
FRMD1-205ENST00000440994 ABCC9O60706 1549 aa21.19■□□□□ 0.98
FRMD1-205ENST00000440994 MYT1Q01538 1121 aa21.09■□□□□ 0.97
FRMD1-205ENST00000440994 DCAF1Q9Y4B6 1507 aa21.08■□□□□ 0.96
FRMD1-205ENST00000440994 SCRIBQ14160 1630 aa20.95■□□□□ 0.94
FRMD1-205ENST00000440994 PCGF6Q9BYE7 350 aa20.91■□□□□ 0.94
FRMD1-205ENST00000440994 CHIC1Q5VXU3 224 aa20.88■□□□□ 0.93
FRMD1-205ENST00000440994 SCAF1Q9H7N4 1312 aaKnown RBP20.87■□□□□ 0.93
FRMD1-205ENST00000440994 MYO15BQ96JP2 1530 aa20.68■□□□□ 0.9
FRMD1-205ENST00000440994 RSF1Q96T23 1441 aaPredicted RBP20.56■□□□□ 0.88
FRMD1-205ENST00000440994 NACADO15069 1562 aa20.53■□□□□ 0.88
FRMD1-205ENST00000440994 CECR2Q9BXF3 1484 aa20.51■□□□□ 0.87
FRMD1-205ENST00000440994 LOC105371045A0A1W2PR82 267 aa20.48■□□□□ 0.87
FRMD1-205ENST00000440994 PABPN1Q86U42 306 aaKnown RBP eCLIP20.4■□□□□ 0.86
FRMD1-205ENST00000440994 EHMT2Q96KQ7 1210 aa20.35■□□□□ 0.85
FRMD1-205ENST00000440994 RB1CC1Q8TDY2 1594 aa20.32■□□□□ 0.84
FRMD1-205ENST00000440994 MROH2BQ7Z745 1585 aa20.31■□□□□ 0.84
FRMD1-205ENST00000440994 FAM9AQ8IZU1 332 aaPredicted RBP20.31■□□□□ 0.84
FRMD1-205ENST00000440994 TRIM41Q8WV44 630 aa20.24■□□□□ 0.83
FRMD1-205ENST00000440994 WIZO95785 1651 aa20.18■□□□□ 0.82
FRMD1-205ENST00000440994 ACIN1Q9UKV3 1341 aaKnown RBP20.12■□□□□ 0.81
FRMD1-205ENST00000440994 NEUROD1Q13562 356 aa20.07■□□□□ 0.8
FRMD1-205ENST00000440994 GTF3C3Q9Y5Q9 886 aa20.02■□□□□ 0.8
FRMD1-205ENST00000440994 UNC13AQ9UPW8 1703 aa20.02■□□□□ 0.8
FRMD1-205ENST00000440994 ZEB1P37275 1124 aaPredicted RBP20.01■□□□□ 0.79
FRMD1-205ENST00000440994 TRIM26Q12899 539 aaPredicted RBP19.99■□□□□ 0.79
FRMD1-205ENST00000440994 TTBK1Q5TCY1 1321 aaPredicted RBP19.96■□□□□ 0.79
FRMD1-205ENST00000440994 BAZ1AQ9NRL2 1556 aaPredicted RBP19.94■□□□□ 0.78
FRMD1-205ENST00000440994 BICRAQ9NZM4 1560 aa19.85■□□□□ 0.77
FRMD1-205ENST00000440994 SMARCA4P51532 1647 aa19.83■□□□□ 0.77
FRMD1-205ENST00000440994 BCL11AQ9H165 835 aa19.78■□□□□ 0.76
FRMD1-205ENST00000440994 CCDC88BA6NC98 1476 aa19.78■□□□□ 0.76
FRMD1-205ENST00000440994 CENPBP07199 599 aaPredicted RBP19.73■□□□□ 0.75
FRMD1-205ENST00000440994 ABCC8Q09428 1581 aa19.71■□□□□ 0.75
FRMD1-205ENST00000440994 TOP2AP11388 1531 aaKnown RBP19.68■□□□□ 0.74
FRMD1-205ENST00000440994 SMARCA2P51531 1590 aa19.63■□□□□ 0.73
FRMD1-205ENST00000440994 PRKCSHP14314 528 aaPredicted RBP19.62■□□□□ 0.73
FRMD1-205ENST00000440994 EIF4G1Q04637 1599 aaKnown RBP19.51■□□□□ 0.71
FRMD1-205ENST00000440994 SOGA1O94964 1423 aa19.5■□□□□ 0.71
FRMD1-205ENST00000440994 ATAD2BQ9ULI0 1458 aa19.5■□□□□ 0.71
FRMD1-205ENST00000440994 RUSC2Q8N2Y8 1516 aa19.45■□□□□ 0.7
FRMD1-205ENST00000440994 BAZ1BQ9UIG0 1483 aaKnown RBP19.44■□□□□ 0.7
FRMD1-205ENST00000440994 DIEXFQ68CQ4 756 aaKnown RBP19.42■□□□□ 0.7
FRMD1-205ENST00000440994 UBTFP17480 764 aaKnown RBP19.4■□□□□ 0.7
FRMD1-205ENST00000440994 RANGAP1P46060 587 aaPredicted RBP19.38■□□□□ 0.69
FRMD1-205ENST00000440994 CSRNP3Q8WYN3 585 aa19.34■□□□□ 0.69
FRMD1-205ENST00000440994 ANP32EQ9BTT0 268 aa19.33■□□□□ 0.68
FRMD1-205ENST00000440994 WRNQ14191 1432 aaPredicted RBP eCLIP19.32■□□□□ 0.68
FRMD1-205ENST00000440994 PEG3Q9GZU2 1588 aa19.31■□□□□ 0.68
FRMD1-205ENST00000440994 YTHDC1Q96MU7 727 aaKnown RBP19.25■□□□□ 0.67
FRMD1-205ENST00000440994 SYNJ1O43426 1573 aa19.2■□□□□ 0.66
FRMD1-205ENST00000440994 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.15■□□□□ 0.66
FRMD1-205ENST00000440994 CEP162Q5TB80 1403 aa19.14■□□□□ 0.65
FRMD1-205ENST00000440994 CCER1Q8TC90 406 aaPredicted RBP19.11■□□□□ 0.65
FRMD1-205ENST00000440994 NCAPD3P42695 1498 aa19.1■□□□□ 0.65
FRMD1-205ENST00000440994 TNIKQ9UKE5 1360 aa19.05■□□□□ 0.64
FRMD1-205ENST00000440994 ERICH6Q7L0X2 663 aa19.04■□□□□ 0.64
FRMD1-205ENST00000440994 TSHZ2Q9NRE2 1034 aa18.99■□□□□ 0.63
FRMD1-205ENST00000440994 EEA1Q15075 1411 aa18.99■□□□□ 0.63
FRMD1-205ENST00000440994 GOLGA3Q08378 1498 aa18.98■□□□□ 0.63
FRMD1-205ENST00000440994 DNAJC5BQ9UF47 199 aa18.98■□□□□ 0.63
FRMD1-205ENST00000440994 RAPGEF2Q9Y4G8 1499 aa18.97■□□□□ 0.63
FRMD1-205ENST00000440994 HMGXB3Q12766 1538 aa18.94■□□□□ 0.62
FRMD1-205ENST00000440994 APLP2Q06481 763 aa18.9■□□□□ 0.62
FRMD1-205ENST00000440994 MIER1Q8N108 512 aa18.89■□□□□ 0.61
FRMD1-205ENST00000440994 CEP164Q9UPV0 1460 aa18.89■□□□□ 0.61
FRMD1-205ENST00000440994 CUX1P39880 1505 aa18.89■□□□□ 0.61
FRMD1-205ENST00000440994 CC2D2AQ9P2K1 1620 aa18.89■□□□□ 0.61
FRMD1-205ENST00000440994 CFTRP13569 1480 aa18.88■□□□□ 0.61
FRMD1-205ENST00000440994 SUPT16HQ9Y5B9 1047 aaKnown RBP18.87■□□□□ 0.61
FRMD1-205ENST00000440994 TOP2BQ02880 1626 aa18.87■□□□□ 0.61
FRMD1-205ENST00000440994 CLIP1P30622 1438 aa18.87■□□□□ 0.61
FRMD1-205ENST00000440994 ZNF316A6NFI3 1004 aaPredicted RBP18.87■□□□□ 0.61
FRMD1-205ENST00000440994 HNRNPUL2Q1KMD3 747 aaKnown RBP18.83■□□□□ 0.61
FRMD1-205ENST00000440994 CADPSQ9ULU8 1353 aa18.83■□□□□ 0.6
FRMD1-205ENST00000440994 NESP48681 1621 aa18.78■□□□□ 0.6
FRMD1-205ENST00000440994 KIF21BO75037 1637 aa18.74■□□□□ 0.59
FRMD1-205ENST00000440994 BIVM-ERCC5R4GMW8 1640 aa18.73■□□□□ 0.59
FRMD1-205ENST00000440994 KIF27Q86VH2 1401 aa18.72■□□□□ 0.59
FRMD1-205ENST00000440994 CUX2O14529 1486 aa18.7■□□□□ 0.58
FRMD1-205ENST00000440994 P3H3Q8IVL6 736 aa18.69■□□□□ 0.58
FRMD1-205ENST00000440994 CLSPNQ9HAW4 1339 aa18.68■□□□□ 0.58
FRMD1-205ENST00000440994 PRXQ9BXM0 1461 aa18.67■□□□□ 0.58
FRMD1-205ENST00000440994 KANK4Q5T7N3 995 aaPredicted RBP18.67■□□□□ 0.58
FRMD1-205ENST00000440994 VPS8Q8N3P4 1428 aa18.65■□□□□ 0.58
FRMD1-205ENST00000440994 FANCD2Q9BXW9 1451 aa18.65■□□□□ 0.58
FRMD1-205ENST00000440994 FGD5Q6ZNL6 1462 aa18.64■□□□□ 0.57
FRMD1-205ENST00000440994 IGF1RP08069 1367 aa18.64■□□□□ 0.57
FRMD1-205ENST00000440994 RAD54L2Q9Y4B4 1467 aa18.62■□□□□ 0.57
FRMD1-205ENST00000440994 ATP1B4Q9UN42 357 aaPredicted RBP18.62■□□□□ 0.57
FRMD1-205ENST00000440994 ARAP1Q96P48 1450 aa18.57■□□□□ 0.56
FRMD1-205ENST00000440994 ITGAEP38570 1179 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms