RNA–Protein interactions for RNA: ENST00000328933.9

SYNGR1-203, Transcript of synaptogyrin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR1, Length 4,391 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-203ENST00000328933 DCAF8L2P0C7V8 631 aa27.13■■□□□ 1.93
SYNGR1-203ENST00000328933 NISCHQ9Y2I1 1504 aa27.05■■□□□ 1.92
SYNGR1-203ENST00000328933 SHROOM4Q9ULL8 1493 aa24.97■■□□□ 1.59
SYNGR1-203ENST00000328933 SUPT5HO00267 1087 aaKnown RBP24.84■■□□□ 1.57
SYNGR1-203ENST00000328933 ABCC9O60706 1549 aa24.01■■□□□ 1.43
SYNGR1-203ENST00000328933 EHMT2Q96KQ7 1210 aa23.8■■□□□ 1.4
SYNGR1-203ENST00000328933 PABPN1Q86U42 306 aaKnown RBP eCLIP23.55■■□□□ 1.36
SYNGR1-203ENST00000328933 FAM9AQ8IZU1 332 aaPredicted RBP23.38■■□□□ 1.33
SYNGR1-203ENST00000328933 RANGAP1P46060 587 aaPredicted RBP23.11■■□□□ 1.29
SYNGR1-203ENST00000328933 TRIM41Q8WV44 630 aa23.06■■□□□ 1.28
SYNGR1-203ENST00000328933 APLP2Q06481 763 aa23.05■■□□□ 1.28
SYNGR1-203ENST00000328933 ATP1B4Q9UN42 357 aaPredicted RBP22.87■■□□□ 1.25
SYNGR1-203ENST00000328933 UBTFP17480 764 aaKnown RBP22.76■■□□□ 1.23
SYNGR1-203ENST00000328933 TTBK1Q5TCY1 1321 aaPredicted RBP22.75■■□□□ 1.23
SYNGR1-203ENST00000328933 CCDC180Q9P1Z9 1646 aa22.53■■□□□ 1.2
SYNGR1-203ENST00000328933 SCRIBQ14160 1630 aa22.46■■□□□ 1.19
SYNGR1-203ENST00000328933 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.38■■□□□ 1.17
SYNGR1-203ENST00000328933 HNRNPUL2Q1KMD3 747 aaKnown RBP22.38■■□□□ 1.17
SYNGR1-203ENST00000328933 FBLN2P98095 1184 aa22.3■■□□□ 1.16
SYNGR1-203ENST00000328933 ZCCHC6Q5VYS8 1495 aaKnown RBP22.3■■□□□ 1.16
SYNGR1-203ENST00000328933 RB1CC1Q8TDY2 1594 aa22.27■■□□□ 1.15
SYNGR1-203ENST00000328933 MYT1LQ9UL68 1186 aa22.19■■□□□ 1.14
SYNGR1-203ENST00000328933 CHIC1Q5VXU3 224 aa22.02■■□□□ 1.12
SYNGR1-203ENST00000328933 NACADO15069 1562 aa22■■□□□ 1.11
SYNGR1-203ENST00000328933 PPARGC1BQ86YN6 1023 aaKnown RBP22■■□□□ 1.11
SYNGR1-203ENST00000328933 PCGF6Q9BYE7 350 aa21.92■■□□□ 1.1
SYNGR1-203ENST00000328933 LOC105371045A0A1W2PR82 267 aa21.87■■□□□ 1.09
SYNGR1-203ENST00000328933 ITGAEP38570 1179 aa21.82■■□□□ 1.08
SYNGR1-203ENST00000328933 ARID3CA6NKF2 412 aa21.62■■□□□ 1.05
SYNGR1-203ENST00000328933 P3H3Q8IVL6 736 aa21.62■■□□□ 1.05
SYNGR1-203ENST00000328933 CCER1Q8TC90 406 aaPredicted RBP21.61■■□□□ 1.05
SYNGR1-203ENST00000328933 BAZ1BQ9UIG0 1483 aaKnown RBP21.51■■□□□ 1.03
SYNGR1-203ENST00000328933 CSRNP3Q8WYN3 585 aa21.5■■□□□ 1.03
SYNGR1-203ENST00000328933 CHMP7Q8WUX9 453 aaPredicted RBP21.48■■□□□ 1.03
SYNGR1-203ENST00000328933 ERCC6Q03468 1493 aa21.47■■□□□ 1.03
SYNGR1-203ENST00000328933 NPM1P06748 294 aaKnown RBP eCLIP21.46■■□□□ 1.03
SYNGR1-203ENST00000328933 DCAF1Q9Y4B6 1507 aa21.41■■□□□ 1.02
SYNGR1-203ENST00000328933 FAM50AQ14320 339 aaKnown RBP21.4■■□□□ 1.02
SYNGR1-203ENST00000328933 RSF1Q96T23 1441 aaPredicted RBP21.38■■□□□ 1.01
SYNGR1-203ENST00000328933 CECR2Q9BXF3 1484 aa21.36■■□□□ 1.01
SYNGR1-203ENST00000328933 BAZ1AQ9NRL2 1556 aaPredicted RBP21.25■□□□□ 0.99
SYNGR1-203ENST00000328933 ZNF777Q9ULD5 760 aaPredicted RBP21.23■□□□□ 0.99
SYNGR1-203ENST00000328933 CDK11AQ9UQ88 783 aaPredicted RBP21.22■□□□□ 0.99
SYNGR1-203ENST00000328933 TRIM52Q96A61 297 aa21.17■□□□□ 0.98
SYNGR1-203ENST00000328933 TRIM26Q12899 539 aaPredicted RBP21.15■□□□□ 0.98
SYNGR1-203ENST00000328933 POLR3GLQ9BT43 218 aa21.14■□□□□ 0.97
SYNGR1-203ENST00000328933 PLPPR3Q6T4P5 718 aa21.1■□□□□ 0.97
SYNGR1-203ENST00000328933 ESF1Q9H501 851 aaKnown RBP21.07■□□□□ 0.96
SYNGR1-203ENST00000328933 MYO15BQ96JP2 1530 aa21.04■□□□□ 0.96
SYNGR1-203ENST00000328933 ZEB1P37275 1124 aaPredicted RBP21.04■□□□□ 0.96
SYNGR1-203ENST00000328933 WRNQ14191 1432 aaPredicted RBP eCLIP21■□□□□ 0.95
SYNGR1-203ENST00000328933 PDS5BQ9NTI5 1447 aa20.98■□□□□ 0.95
SYNGR1-203ENST00000328933 MROH2BQ7Z745 1585 aa20.97■□□□□ 0.95
SYNGR1-203ENST00000328933 KCNH8Q96L42 1107 aa20.97■□□□□ 0.95
SYNGR1-203ENST00000328933 SLC4A1APQ9BWU0 796 aaKnown RBP20.96■□□□□ 0.95
SYNGR1-203ENST00000328933 SMARCA2P51531 1590 aa20.95■□□□□ 0.94
SYNGR1-203ENST00000328933 BCANQ96GW7 911 aa20.95■□□□□ 0.94
SYNGR1-203ENST00000328933 CNGB1Q14028 1251 aaPredicted RBP20.92■□□□□ 0.94
SYNGR1-203ENST00000328933 TRHP20396 242 aaPredicted RBP20.9■□□□□ 0.94
SYNGR1-203ENST00000328933 ZNF326Q5BKZ1 582 aaKnown RBP20.84■□□□□ 0.93
SYNGR1-203ENST00000328933 KIF27Q86VH2 1401 aa20.84■□□□□ 0.93
SYNGR1-203ENST00000328933 NEUROD1Q13562 356 aa20.8■□□□□ 0.92
SYNGR1-203ENST00000328933 CADPSQ9ULU8 1353 aa20.8■□□□□ 0.92
SYNGR1-203ENST00000328933 ATAD2BQ9ULI0 1458 aa20.79■□□□□ 0.92
SYNGR1-203ENST00000328933 PLEKHD1A6NEE1 506 aa20.78■□□□□ 0.92
SYNGR1-203ENST00000328933 TDRD9Q8NDG6 1382 aaKnown RBP20.76■□□□□ 0.91
SYNGR1-203ENST00000328933 STAG3Q9UJ98 1225 aa20.75■□□□□ 0.91
SYNGR1-203ENST00000328933 CCDC88BA6NC98 1476 aa20.75■□□□□ 0.91
SYNGR1-203ENST00000328933 CHGAP10645 457 aaKnown RBP20.74■□□□□ 0.91
SYNGR1-203ENST00000328933 MTUS2Q5JR59 1369 aa20.72■□□□□ 0.91
SYNGR1-203ENST00000328933 CUX2O14529 1486 aa20.71■□□□□ 0.91
SYNGR1-203ENST00000328933 TSPY4P0CV99 314 aa20.71■□□□□ 0.91
SYNGR1-203ENST00000328933 TSPY10P0CW01 314 aa20.71■□□□□ 0.91
SYNGR1-203ENST00000328933 CHIC2Q9UKJ5 165 aa20.69■□□□□ 0.9
SYNGR1-203ENST00000328933 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.68■□□□□ 0.9
SYNGR1-203ENST00000328933 SOGA1O94964 1423 aa20.66■□□□□ 0.9
SYNGR1-203ENST00000328933 ARID4BQ4LE39 1312 aaPredicted RBP20.63■□□□□ 0.89
SYNGR1-203ENST00000328933 CLIP1P30622 1438 aa20.61■□□□□ 0.89
SYNGR1-203ENST00000328933 DNAJC5BQ9UF47 199 aa20.6■□□□□ 0.89
SYNGR1-203ENST00000328933 CARMIL1Q5VZK9 1371 aa20.6■□□□□ 0.89
SYNGR1-203ENST00000328933 EEA1Q15075 1411 aa20.59■□□□□ 0.89
SYNGR1-203ENST00000328933 WIZO95785 1651 aa20.58■□□□□ 0.89
SYNGR1-203ENST00000328933 CEP164Q9UPV0 1460 aa20.56■□□□□ 0.88
SYNGR1-203ENST00000328933 SMARCA4P51532 1647 aa20.55■□□□□ 0.88
SYNGR1-203ENST00000328933 EIF4G1Q04637 1599 aaKnown RBP20.54■□□□□ 0.88
SYNGR1-203ENST00000328933 TOP2AP11388 1531 aaKnown RBP20.49■□□□□ 0.87
SYNGR1-203ENST00000328933 PELP1Q8IZL8 1130 aaKnown RBP20.49■□□□□ 0.87
SYNGR1-203ENST00000328933 GOLGA3Q08378 1498 aa20.48■□□□□ 0.87
SYNGR1-203ENST00000328933 FANCD2Q9BXW9 1451 aa20.48■□□□□ 0.87
SYNGR1-203ENST00000328933 YTHDC1Q96MU7 727 aaKnown RBP20.47■□□□□ 0.87
SYNGR1-203ENST00000328933 CFDP1Q9UEE9 299 aaPredicted RBP20.47■□□□□ 0.87
SYNGR1-203ENST00000328933 OSCARQ8IYS5 282 aa20.46■□□□□ 0.87
SYNGR1-203ENST00000328933 CYB5RLQ6IPT4 315 aa20.46■□□□□ 0.87
SYNGR1-203ENST00000328933 NCAPD3P42695 1498 aa20.42■□□□□ 0.86
SYNGR1-203ENST00000328933 SENP3Q9H4L4 574 aaPredicted RBP20.41■□□□□ 0.86
SYNGR1-203ENST00000328933 ABCC8Q09428 1581 aa20.41■□□□□ 0.86
SYNGR1-203ENST00000328933 CARMIL2Q6F5E8 1435 aa20.37■□□□□ 0.85
SYNGR1-203ENST00000328933 RRP7BPQ9NSQ0 103 aa20.37■□□□□ 0.85
SYNGR1-203ENST00000328933 CENPBP07199 599 aaPredicted RBP20.35■□□□□ 0.85
SYNGR1-203ENST00000328933 JPH4Q96JJ6 628 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms