Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NPIPA3F8WFD2 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
NPIPA3F8WFD2 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NPIPA3F8WFD2 NHP2-202ENST00000314397 599 ntTSL 2 BASIC12.46□□□□□ -0.41
NPIPA3F8WFD2 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NPIPA3F8WFD2 DKKL1P1-201ENST00000400550 698 ntBASIC12.46□□□□□ -0.41
NPIPA3F8WFD2 MIR1227-201ENST00000408484 88 ntBASIC12.46□□□□□ -0.41
NPIPA3F8WFD2 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC12.46□□□□□ -0.41
NPIPA3F8WFD2 AC073210.1-201ENST00000414799 232 ntBASIC12.46□□□□□ -0.41
NPIPA3F8WFD2 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC12.46□□□□□ -0.41
NPIPA3F8WFD2 AC005722.1-201ENST00000431878 964 ntBASIC12.46□□□□□ -0.41
NPIPA3F8WFD2 HNRNPA1P56-201ENST00000505767 954 ntBASIC12.46□□□□□ -0.41
NPIPA3F8WFD2 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC12.46□□□□□ -0.41
NPIPA3F8WFD2 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NPIPA3F8WFD2 CES1P2-201ENST00000566467 1242 ntBASIC12.46□□□□□ -0.41
NPIPA3F8WFD2 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NPIPA3F8WFD2 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
NPIPA3F8WFD2 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
NPIPA3F8WFD2 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.42
NPIPA3F8WFD2 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
NPIPA3F8WFD2 AC090114.2-201ENST00000608477 7054 ntBASIC12.46□□□□□ -0.42
NPIPA3F8WFD2 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
NPIPA3F8WFD2 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC12.46□□□□□ -0.42
NPIPA3F8WFD2 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.46□□□□□ -0.42
NPIPA3F8WFD2 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NPIPA3F8WFD2 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.46□□□□□ -0.42
NPIPA3F8WFD2 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NPIPA3F8WFD2 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 ACTBP14-201ENST00000411655 1089 ntBASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 HCG27-204ENST00000424675 895 ntTSL 3 BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 EEF1DP2-201ENST00000433698 843 ntBASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 KRT18P37-201ENST00000520711 1282 ntBASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 FOXN3-AS2-201ENST00000554071 1262 ntBASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 MT2A-202ENST00000561491 581 ntTSL 2 BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 MT3-202ENST00000561640 514 ntTSL 3 BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 RN7SL556P-201ENST00000582856 298 ntBASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 AC055811.3-201ENST00000584952 686 ntBASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 MIR6756-201ENST00000616240 63 ntBASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPA3F8WFD2 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms