RNA–Protein interactions for RNA: ENST00000313654.13

LAMA3-202, Transcript of laminin subunit alpha 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA3, Length 10,661 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-202ENST00000313654 PELP1Q8IZL8 1130 aaKnown RBP21.5■■□□□ 1.03
LAMA3-202ENST00000313654 ERICH6Q7L0X2 663 aa20.74■□□□□ 0.91
LAMA3-202ENST00000313654 MYT1Q01538 1121 aa20.55■□□□□ 0.88
LAMA3-202ENST00000313654 CCER1Q8TC90 406 aaPredicted RBP20.39■□□□□ 0.85
LAMA3-202ENST00000313654 DCAF8L2P0C7V8 631 aa20.36■□□□□ 0.85
LAMA3-202ENST00000313654 CENPBP07199 599 aaPredicted RBP19.95■□□□□ 0.78
LAMA3-202ENST00000313654 EHMT2Q96KQ7 1210 aa19.82■□□□□ 0.76
LAMA3-202ENST00000313654 TTBK1Q5TCY1 1321 aaPredicted RBP19.75■□□□□ 0.75
LAMA3-202ENST00000313654 YTHDC1Q96MU7 727 aaKnown RBP19.71■□□□□ 0.75
LAMA3-202ENST00000313654 NEFLP07196 543 aa19.68■□□□□ 0.74
LAMA3-202ENST00000313654 SUPT5HO00267 1087 aaKnown RBP19.63■□□□□ 0.73
LAMA3-202ENST00000313654 DAXXQ9UER7 740 aaPredicted RBP19.56■□□□□ 0.72
LAMA3-202ENST00000313654 APLP2Q06481 763 aa19.54■□□□□ 0.72
LAMA3-202ENST00000313654 PCGF6Q9BYE7 350 aa19.32■□□□□ 0.68
LAMA3-202ENST00000313654 RTL5Q5HYW3 569 aaPredicted RBP19.16■□□□□ 0.66
LAMA3-202ENST00000313654 ZEB1P37275 1124 aaPredicted RBP19.15■□□□□ 0.66
LAMA3-202ENST00000313654 ZNF316A6NFI3 1004 aaPredicted RBP19.08■□□□□ 0.64
LAMA3-202ENST00000313654 FAM9AQ8IZU1 332 aaPredicted RBP18.96■□□□□ 0.63
LAMA3-202ENST00000313654 SHROOM4Q9ULL8 1493 aa18.94■□□□□ 0.62
LAMA3-202ENST00000313654 RANGAP1P46060 587 aaPredicted RBP18.7■□□□□ 0.58
LAMA3-202ENST00000313654 CLSPNQ9HAW4 1339 aa18.68■□□□□ 0.58
LAMA3-202ENST00000313654 EIF5BO60841 1220 aaKnown RBP18.61■□□□□ 0.57
LAMA3-202ENST00000313654 GLIPR1L2Q4G1C9 344 aa18.59■□□□□ 0.57
LAMA3-202ENST00000313654 ATP1B4Q9UN42 357 aaPredicted RBP18.58■□□□□ 0.56
LAMA3-202ENST00000313654 POLR3GLQ9BT43 218 aa18.52■□□□□ 0.55
LAMA3-202ENST00000313654 CNGB1Q14028 1251 aaPredicted RBP18.37■□□□□ 0.53
LAMA3-202ENST00000313654 HRCP23327 699 aa18.25■□□□□ 0.51
LAMA3-202ENST00000313654 BCANQ96GW7 911 aa18.21■□□□□ 0.51
LAMA3-202ENST00000313654 SLC4A1APQ9BWU0 796 aaKnown RBP18.2■□□□□ 0.5
LAMA3-202ENST00000313654 ANP32BQ92688 251 aaKnown RBP18.17■□□□□ 0.5
LAMA3-202ENST00000313654 UBTFP17480 764 aaKnown RBP18.17■□□□□ 0.5
LAMA3-202ENST00000313654 CDK11AQ9UQ88 783 aaPredicted RBP18.14■□□□□ 0.5
LAMA3-202ENST00000313654 PPARGC1BQ86YN6 1023 aaKnown RBP18.13■□□□□ 0.49
LAMA3-202ENST00000313654 ZBTB47Q9UFB7 747 aaPredicted RBP18.11■□□□□ 0.49
LAMA3-202ENST00000313654 ANP32AP39687 249 aaKnown RBP18.06■□□□□ 0.48
LAMA3-202ENST00000313654 BCL11AQ9H165 835 aa18.06■□□□□ 0.48
LAMA3-202ENST00000313654 TRIM41Q8WV44 630 aa18.01■□□□□ 0.47
LAMA3-202ENST00000313654 GTF3C3Q9Y5Q9 886 aa17.98■□□□□ 0.47
LAMA3-202ENST00000313654 CHIC1Q5VXU3 224 aa17.97■□□□□ 0.47
LAMA3-202ENST00000313654 TRIM26Q12899 539 aaPredicted RBP17.96■□□□□ 0.47
LAMA3-202ENST00000313654 DIEXFQ68CQ4 756 aaKnown RBP17.96■□□□□ 0.47
LAMA3-202ENST00000313654 MYT1LQ9UL68 1186 aa17.95■□□□□ 0.46
LAMA3-202ENST00000313654 ITGAEP38570 1179 aa17.95■□□□□ 0.46
LAMA3-202ENST00000313654 NPM2Q86SE8 214 aaKnown RBP17.92■□□□□ 0.46
LAMA3-202ENST00000313654 CANXP27824 592 aaKnown RBP17.91■□□□□ 0.46
LAMA3-202ENST00000313654 HSP90AA1P07900 732 aaKnown RBP17.86■□□□□ 0.45
LAMA3-202ENST00000313654 TNNT2P45379 298 aaPredicted RBP17.85■□□□□ 0.45
LAMA3-202ENST00000313654 ARXQ96QS3 562 aa17.83■□□□□ 0.44
LAMA3-202ENST00000313654 NBR1Q14596 966 aa17.78■□□□□ 0.44
LAMA3-202ENST00000313654 SLC24A1O60721 1099 aa17.75■□□□□ 0.43
LAMA3-202ENST00000313654 CDK11BP21127 795 aaKnown RBP17.69■□□□□ 0.42
LAMA3-202ENST00000313654 HNRNPUL2Q1KMD3 747 aaKnown RBP17.69■□□□□ 0.42
LAMA3-202ENST00000313654 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.63■□□□□ 0.41
LAMA3-202ENST00000313654 ANP32CO43423 234 aa17.6■□□□□ 0.41
LAMA3-202ENST00000313654 AMER1Q5JTC6 1135 aaPredicted RBP17.59■□□□□ 0.41
LAMA3-202ENST00000313654 UPF2Q9HAU5 1272 aaKnown RBP17.57■□□□□ 0.4
LAMA3-202ENST00000313654 TRIM44Q96DX7 344 aaPredicted RBP17.43■□□□□ 0.38
LAMA3-202ENST00000313654 NEFMP07197 916 aa17.42■□□□□ 0.38
LAMA3-202ENST00000313654 ACIN1Q9UKV3 1341 aaKnown RBP17.41■□□□□ 0.38
LAMA3-202ENST00000313654 ZNF326Q5BKZ1 582 aaKnown RBP17.41■□□□□ 0.38
LAMA3-202ENST00000313654 NAP1L5Q96NT1 182 aaPredicted RBP17.4■□□□□ 0.38
LAMA3-202ENST00000313654 NEUROD1Q13562 356 aa17.39■□□□□ 0.37
LAMA3-202ENST00000313654 DNTTIP2Q5QJE6 756 aaKnown RBP17.32■□□□□ 0.36
LAMA3-202ENST00000313654 PTMAP06454 111 aaKnown RBP17.31■□□□□ 0.36
LAMA3-202ENST00000313654 FKBP8Q14318 412 aa17.3■□□□□ 0.36
LAMA3-202ENST00000313654 RTN4Q9NQC3 1192 aaKnown RBP17.29■□□□□ 0.36
LAMA3-202ENST00000313654 FAM50AQ14320 339 aaKnown RBP17.27■□□□□ 0.36
LAMA3-202ENST00000313654 TRIM52Q96A61 297 aa17.27■□□□□ 0.36
LAMA3-202ENST00000313654 NCLP19338 710 aaKnown RBP17.18■□□□□ 0.34
LAMA3-202ENST00000313654 ERICH6BQ5W0A0 696 aa17.18■□□□□ 0.34
LAMA3-202ENST00000313654 NISCHQ9Y2I1 1504 aa17.18■□□□□ 0.34
LAMA3-202ENST00000313654 ZRSR1Q15695 479 aaKnown RBP17.13■□□□□ 0.33
LAMA3-202ENST00000313654 CCDC136Q96JN2 1154 aa17.13■□□□□ 0.33
LAMA3-202ENST00000313654 ANP32EQ9BTT0 268 aa17.13■□□□□ 0.33
LAMA3-202ENST00000313654 GOLGA6L22H0YM25 854 aa17.12■□□□□ 0.33
LAMA3-202ENST00000313654 BECN1Q14457 450 aa17.12■□□□□ 0.33
LAMA3-202ENST00000313654 LOC105371045A0A1W2PR82 267 aa17.1■□□□□ 0.33
LAMA3-202ENST00000313654 TULP1O00294 542 aaPredicted RBP17.09■□□□□ 0.33
LAMA3-202ENST00000313654 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.09■□□□□ 0.33
LAMA3-202ENST00000313654 TPRNQ4KMQ1 711 aa17.09■□□□□ 0.33
LAMA3-202ENST00000313654 DDRGK1Q96HY6 314 aa17.07■□□□□ 0.32
LAMA3-202ENST00000313654 ARID4BQ4LE39 1312 aaPredicted RBP17.04■□□□□ 0.32
LAMA3-202ENST00000313654 CHAF1AQ13111 956 aaPredicted RBP17.03■□□□□ 0.32
LAMA3-202ENST00000313654 CALRP27797 417 aaKnown RBP17.02■□□□□ 0.32
LAMA3-202ENST00000313654 TNNT3P45378 269 aaPredicted RBP17.02■□□□□ 0.32
LAMA3-202ENST00000313654 GOLGA6L6A8MZA4 724 aa17.02■□□□□ 0.31
LAMA3-202ENST00000313654 MYH16Q9H6N6 1097 aa17.02■□□□□ 0.31
LAMA3-202ENST00000313654 HNRNPUQ00839 825 aaKnown RBP eCLIP16.99■□□□□ 0.31
LAMA3-202ENST00000313654 ARID3AQ99856 593 aa16.98■□□□□ 0.31
LAMA3-202ENST00000313654 NCBP3Q53F19 620 aaKnown RBP16.94■□□□□ 0.3
LAMA3-202ENST00000313654 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.91■□□□□ 0.3
LAMA3-202ENST00000313654 FAM9BQ8IZU0 186 aa16.89■□□□□ 0.3
LAMA3-202ENST00000313654 PLCB2Q00722 1185 aa16.89■□□□□ 0.29
LAMA3-202ENST00000313654 LAS1LQ9Y4W2 734 aaKnown RBP16.88■□□□□ 0.29
LAMA3-202ENST00000313654 SALL2Q9Y467 1007 aaPredicted RBP16.88■□□□□ 0.29
LAMA3-202ENST00000313654 IRX6P78412 446 aaPredicted RBP16.88■□□□□ 0.29
LAMA3-202ENST00000313654 NRDCO43847 1150 aa16.87■□□□□ 0.29
LAMA3-202ENST00000313654 MSNP26038 577 aaKnown RBP16.85■□□□□ 0.29
LAMA3-202ENST00000313654 NOC3LQ8WTT2 800 aaKnown RBP16.84■□□□□ 0.29
LAMA3-202ENST00000313654 SCAF1Q9H7N4 1312 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms