RNA–Protein interactions for RNA: ENST00000592954.1

APOC4-202, Transcript of apolipoprotein C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC4, Length 615 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-202ENST00000592954 NISCHQ9Y2I1 1504 aa33.23■■■□□ 2.91
APOC4-202ENST00000592954 CCDC180Q9P1Z9 1646 aa29.66■■■□□ 2.34
APOC4-202ENST00000592954 ABCC9O60706 1549 aa29.61■■■□□ 2.33
APOC4-202ENST00000592954 RB1CC1Q8TDY2 1594 aa28.2■■■□□ 2.11
APOC4-202ENST00000592954 DCAF8L2P0C7V8 631 aa28.19■■■□□ 2.1
APOC4-202ENST00000592954 NACADO15069 1562 aa28.04■■■□□ 2.08
APOC4-202ENST00000592954 DNAJC5BQ9UF47 199 aa27.89■■■□□ 2.06
APOC4-202ENST00000592954 MYO15BQ96JP2 1530 aa27.67■■■□□ 2.02
APOC4-202ENST00000592954 PABPN1Q86U42 306 aaKnown RBP eCLIP27.66■■■□□ 2.02
APOC4-202ENST00000592954 ZCCHC6Q5VYS8 1495 aaKnown RBP27.57■■■□□ 2
APOC4-202ENST00000592954 UNC13AQ9UPW8 1703 aa27.5■■□□□ 1.99
APOC4-202ENST00000592954 DCAF1Q9Y4B6 1507 aa27.41■■□□□ 1.98
APOC4-202ENST00000592954 BICRAQ9NZM4 1560 aa27.34■■□□□ 1.97
APOC4-202ENST00000592954 SCRIBQ14160 1630 aa27.14■■□□□ 1.94
APOC4-202ENST00000592954 SHROOM4Q9ULL8 1493 aa26.96■■□□□ 1.91
APOC4-202ENST00000592954 CC2D2AQ9P2K1 1620 aa26.69■■□□□ 1.86
APOC4-202ENST00000592954 EIF4G1Q04637 1599 aaKnown RBP26.68■■□□□ 1.86
APOC4-202ENST00000592954 CECR2Q9BXF3 1484 aa26.62■■□□□ 1.85
APOC4-202ENST00000592954 NCAPD3P42695 1498 aa25.9■■□□□ 1.74
APOC4-202ENST00000592954 ATAD2BQ9ULI0 1458 aa25.86■■□□□ 1.73
APOC4-202ENST00000592954 SMARCA4P51532 1647 aa25.86■■□□□ 1.73
APOC4-202ENST00000592954 DNAJC5Q9H3Z4 198 aa25.81■■□□□ 1.72
APOC4-202ENST00000592954 SMARCA2P51531 1590 aa25.79■■□□□ 1.72
APOC4-202ENST00000592954 BAZ1AQ9NRL2 1556 aaPredicted RBP25.78■■□□□ 1.72
APOC4-202ENST00000592954 HMGXB3Q12766 1538 aa25.69■■□□□ 1.7
APOC4-202ENST00000592954 BAZ1BQ9UIG0 1483 aaKnown RBP25.66■■□□□ 1.7
APOC4-202ENST00000592954 MROH2BQ7Z745 1585 aa25.63■■□□□ 1.69
APOC4-202ENST00000592954 CUX2O14529 1486 aa25.59■■□□□ 1.69
APOC4-202ENST00000592954 ERCC6Q03468 1493 aa25.57■■□□□ 1.68
APOC4-202ENST00000592954 PEG3Q9GZU2 1588 aa25.56■■□□□ 1.68
APOC4-202ENST00000592954 NESP48681 1621 aa25.47■■□□□ 1.67
APOC4-202ENST00000592954 WIZO95785 1651 aa25.32■■□□□ 1.64
APOC4-202ENST00000592954 LAMC3Q9Y6N6 1575 aa25.27■■□□□ 1.64
APOC4-202ENST00000592954 RSF1Q96T23 1441 aaPredicted RBP25.19■■□□□ 1.62
APOC4-202ENST00000592954 PDS5BQ9NTI5 1447 aa25.18■■□□□ 1.62
APOC4-202ENST00000592954 CADPSQ9ULU8 1353 aa25.17■■□□□ 1.62
APOC4-202ENST00000592954 THOC2Q8NI27 1593 aaKnown RBP25.13■■□□□ 1.61
APOC4-202ENST00000592954 KIF21AQ7Z4S6 1674 aa25.1■■□□□ 1.61
APOC4-202ENST00000592954 TOP2AP11388 1531 aaKnown RBP25■■□□□ 1.59
APOC4-202ENST00000592954 MRC2Q9UBG0 1479 aa24.92■■□□□ 1.58
APOC4-202ENST00000592954 CFTRP13569 1480 aa24.89■■□□□ 1.57
APOC4-202ENST00000592954 FANCD2Q9BXW9 1451 aa24.88■■□□□ 1.57
APOC4-202ENST00000592954 CEP164Q9UPV0 1460 aa24.88■■□□□ 1.57
APOC4-202ENST00000592954 WDR62O43379 1518 aa24.81■■□□□ 1.56
APOC4-202ENST00000592954 CCDC88BA6NC98 1476 aa24.76■■□□□ 1.55
APOC4-202ENST00000592954 URB2Q14146 1524 aaKnown RBP24.64■■□□□ 1.53
APOC4-202ENST00000592954 PRDM2Q13029 1718 aa24.57■■□□□ 1.52
APOC4-202ENST00000592954 TRIM41Q8WV44 630 aa24.51■■□□□ 1.51
APOC4-202ENST00000592954 TOPBP1Q92547 1522 aa24.41■■□□□ 1.5
APOC4-202ENST00000592954 SUPT5HO00267 1087 aaKnown RBP24.38■■□□□ 1.49
APOC4-202ENST00000592954 IFT140Q96RY7 1462 aa24.37■■□□□ 1.49
APOC4-202ENST00000592954 ABCC8Q09428 1581 aa24.37■■□□□ 1.49
APOC4-202ENST00000592954 OSCARQ8IYS5 282 aa24.34■■□□□ 1.49
APOC4-202ENST00000592954 ZNF608Q9ULD9 1512 aaPredicted RBP24.32■■□□□ 1.48
APOC4-202ENST00000592954 DNMBPQ6XZF7 1577 aa24.32■■□□□ 1.48
APOC4-202ENST00000592954 POLA1P09884 1462 aaPredicted RBP24.18■■□□□ 1.46
APOC4-202ENST00000592954 AQRO60306 1485 aaKnown RBP eCLIP24.16■■□□□ 1.46
APOC4-202ENST00000592954 EIF4G3O43432 1585 aaKnown RBP24.16■■□□□ 1.46
APOC4-202ENST00000592954 TARBP1Q13395 1621 aaKnown RBP24.13■■□□□ 1.45
APOC4-202ENST00000592954 RAD54L2Q9Y4B4 1467 aa24.13■■□□□ 1.45
APOC4-202ENST00000592954 SOGA1O94964 1423 aa24.11■■□□□ 1.45
APOC4-202ENST00000592954 RIMBP3CA6NJZ7 1639 aa24.07■■□□□ 1.44
APOC4-202ENST00000592954 RIMBP3BA6NNM3 1639 aa24.07■■□□□ 1.44
APOC4-202ENST00000592954 RIMBP3Q9UFD9 1639 aa24.07■■□□□ 1.44
APOC4-202ENST00000592954 FGD5Q6ZNL6 1462 aa24.07■■□□□ 1.44
APOC4-202ENST00000592954 TDRD9Q8NDG6 1382 aaKnown RBP24.06■■□□□ 1.44
APOC4-202ENST00000592954 CUX1P39880 1505 aa24.06■■□□□ 1.44
APOC4-202ENST00000592954 FBLN2P98095 1184 aa24.06■■□□□ 1.44
APOC4-202ENST00000592954 ARHGEF11O15085 1522 aa23.97■■□□□ 1.43
APOC4-202ENST00000592954 CHD1O14646 1710 aa23.93■■□□□ 1.42
APOC4-202ENST00000592954 SNAPC4Q5SXM2 1469 aa23.89■■□□□ 1.42
APOC4-202ENST00000592954 CHMP7Q8WUX9 453 aaPredicted RBP23.88■■□□□ 1.41
APOC4-202ENST00000592954 WDR97A6NE52 1622 aa23.87■■□□□ 1.41
APOC4-202ENST00000592954 GRIN2BQ13224 1484 aa23.85■■□□□ 1.41
APOC4-202ENST00000592954 GAPVD1Q14C86 1478 aa23.81■■□□□ 1.4
APOC4-202ENST00000592954 MAGI1Q96QZ7 1491 aaPredicted RBP23.81■■□□□ 1.4
APOC4-202ENST00000592954 CYB5RLQ6IPT4 315 aa23.8■■□□□ 1.4
APOC4-202ENST00000592954 WRNQ14191 1432 aaPredicted RBP eCLIP23.77■■□□□ 1.4
APOC4-202ENST00000592954 ABCA10Q8WWZ4 1543 aa23.77■■□□□ 1.4
APOC4-202ENST00000592954 SYNJ2O15056 1496 aa23.74■■□□□ 1.39
APOC4-202ENST00000592954 ARAP1Q96P48 1450 aa23.72■■□□□ 1.39
APOC4-202ENST00000592954 PBRM1Q86U86 1689 aa23.72■■□□□ 1.39
APOC4-202ENST00000592954 TOP2BQ02880 1626 aa23.7■■□□□ 1.39
APOC4-202ENST00000592954 SYNJ1O43426 1573 aa23.7■■□□□ 1.38
APOC4-202ENST00000592954 ABCA5Q8WWZ7 1642 aa23.69■■□□□ 1.38
APOC4-202ENST00000592954 BIVM-ERCC5R4GMW8 1640 aa23.69■■□□□ 1.38
APOC4-202ENST00000592954 CLASP1Q7Z460 1538 aa23.65■■□□□ 1.38
APOC4-202ENST00000592954 TRHP20396 242 aaPredicted RBP23.54■■□□□ 1.36
APOC4-202ENST00000592954 GRIN2AQ12879 1464 aa23.54■■□□□ 1.36
APOC4-202ENST00000592954 ADAMTS12P58397 1594 aa23.52■■□□□ 1.36
APOC4-202ENST00000592954 FHAD1B1AJZ9 1412 aa23.5■■□□□ 1.35
APOC4-202ENST00000592954 ERICH3Q5RHP9 1530 aa23.48■■□□□ 1.35
APOC4-202ENST00000592954 NUP160Q12769 1436 aa23.42■■□□□ 1.34
APOC4-202ENST00000592954 CEP170Q5SW79 1584 aa23.42■■□□□ 1.34
APOC4-202ENST00000592954 ERCC6L2Q5T890 1561 aa23.34■■□□□ 1.33
APOC4-202ENST00000592954 KIF27Q86VH2 1401 aa23.32■■□□□ 1.32
APOC4-202ENST00000592954 IGF1RP08069 1367 aa23.28■■□□□ 1.32
APOC4-202ENST00000592954 JPH4Q96JJ6 628 aa23.28■■□□□ 1.32
APOC4-202ENST00000592954 SHROOM2Q13796 1616 aa23.26■■□□□ 1.31
APOC4-202ENST00000592954 PRG4Q92954 1404 aaPredicted RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms