RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 NISCHQ9Y2I1 1504 aa30.82■■■□□ 2.52
TRAIP-201ENST00000331456 CCDC180Q9P1Z9 1646 aa26.72■■□□□ 1.87
TRAIP-201ENST00000331456 ZCCHC6Q5VYS8 1495 aaKnown RBP25.94■■□□□ 1.74
TRAIP-201ENST00000331456 DCAF1Q9Y4B6 1507 aa25.47■■□□□ 1.67
TRAIP-201ENST00000331456 DCAF8L2P0C7V8 631 aa25.44■■□□□ 1.66
TRAIP-201ENST00000331456 SHROOM4Q9ULL8 1493 aa25.41■■□□□ 1.66
TRAIP-201ENST00000331456 MYO15BQ96JP2 1530 aa25.05■■□□□ 1.6
TRAIP-201ENST00000331456 ABCC9O60706 1549 aa25.01■■□□□ 1.59
TRAIP-201ENST00000331456 NACADO15069 1562 aa24.83■■□□□ 1.57
TRAIP-201ENST00000331456 SCRIBQ14160 1630 aa24.64■■□□□ 1.53
TRAIP-201ENST00000331456 SUPT5HO00267 1087 aaKnown RBP24.62■■□□□ 1.53
TRAIP-201ENST00000331456 RB1CC1Q8TDY2 1594 aa24.55■■□□□ 1.52
TRAIP-201ENST00000331456 RSF1Q96T23 1441 aaPredicted RBP24.03■■□□□ 1.44
TRAIP-201ENST00000331456 UNC13AQ9UPW8 1703 aa24.01■■□□□ 1.43
TRAIP-201ENST00000331456 CECR2Q9BXF3 1484 aa23.91■■□□□ 1.42
TRAIP-201ENST00000331456 MROH2BQ7Z745 1585 aa23.81■■□□□ 1.4
TRAIP-201ENST00000331456 BAZ1AQ9NRL2 1556 aaPredicted RBP23.79■■□□□ 1.4
TRAIP-201ENST00000331456 BICRAQ9NZM4 1560 aa23.75■■□□□ 1.39
TRAIP-201ENST00000331456 CHIC1Q5VXU3 224 aa23.71■■□□□ 1.39
TRAIP-201ENST00000331456 PABPN1Q86U42 306 aaKnown RBP eCLIP23.66■■□□□ 1.38
TRAIP-201ENST00000331456 WIZO95785 1651 aa23.64■■□□□ 1.37
TRAIP-201ENST00000331456 SMARCA4P51532 1647 aa23.62■■□□□ 1.37
TRAIP-201ENST00000331456 TOP2AP11388 1531 aaKnown RBP23.41■■□□□ 1.34
TRAIP-201ENST00000331456 PEG3Q9GZU2 1588 aa23.3■■□□□ 1.32
TRAIP-201ENST00000331456 SMARCA2P51531 1590 aa23.19■■□□□ 1.3
TRAIP-201ENST00000331456 CCDC88BA6NC98 1476 aa23.19■■□□□ 1.3
TRAIP-201ENST00000331456 ATAD2BQ9ULI0 1458 aa23.16■■□□□ 1.3
TRAIP-201ENST00000331456 TRIM41Q8WV44 630 aa23.14■■□□□ 1.29
TRAIP-201ENST00000331456 EIF4G1Q04637 1599 aaKnown RBP23.09■■□□□ 1.29
TRAIP-201ENST00000331456 BAZ1BQ9UIG0 1483 aaKnown RBP23.08■■□□□ 1.28
TRAIP-201ENST00000331456 HMGXB3Q12766 1538 aa22.9■■□□□ 1.26
TRAIP-201ENST00000331456 NCAPD3P42695 1498 aa22.9■■□□□ 1.26
TRAIP-201ENST00000331456 LOC105371045A0A1W2PR82 267 aa22.82■■□□□ 1.24
TRAIP-201ENST00000331456 ABCC8Q09428 1581 aa22.79■■□□□ 1.24
TRAIP-201ENST00000331456 FAM9AQ8IZU1 332 aaPredicted RBP22.72■■□□□ 1.23
TRAIP-201ENST00000331456 DNAJC5BQ9UF47 199 aa22.65■■□□□ 1.22
TRAIP-201ENST00000331456 WRNQ14191 1432 aaPredicted RBP eCLIP22.64■■□□□ 1.21
TRAIP-201ENST00000331456 CC2D2AQ9P2K1 1620 aa22.63■■□□□ 1.21
TRAIP-201ENST00000331456 EEA1Q15075 1411 aa22.51■■□□□ 1.19
TRAIP-201ENST00000331456 SYNJ1O43426 1573 aa22.5■■□□□ 1.19
TRAIP-201ENST00000331456 CFTRP13569 1480 aa22.48■■□□□ 1.19
TRAIP-201ENST00000331456 SOGA1O94964 1423 aa22.44■■□□□ 1.18
TRAIP-201ENST00000331456 EHMT2Q96KQ7 1210 aa22.4■■□□□ 1.18
TRAIP-201ENST00000331456 TOP2BQ02880 1626 aa22.39■■□□□ 1.18
TRAIP-201ENST00000331456 PRDM2Q13029 1718 aa22.38■■□□□ 1.17
TRAIP-201ENST00000331456 CADPSQ9ULU8 1353 aa22.36■■□□□ 1.17
TRAIP-201ENST00000331456 BIVM-ERCC5R4GMW8 1640 aa22.35■■□□□ 1.17
TRAIP-201ENST00000331456 CSRNP3Q8WYN3 585 aa22.35■■□□□ 1.17
TRAIP-201ENST00000331456 RUSC2Q8N2Y8 1516 aa22.31■■□□□ 1.16
TRAIP-201ENST00000331456 CUX1P39880 1505 aa22.25■■□□□ 1.15
TRAIP-201ENST00000331456 GOLGA3Q08378 1498 aa22.2■■□□□ 1.14
TRAIP-201ENST00000331456 TNIKQ9UKE5 1360 aa22.19■■□□□ 1.14
TRAIP-201ENST00000331456 CEP164Q9UPV0 1460 aa22.17■■□□□ 1.14
TRAIP-201ENST00000331456 KIF21BO75037 1637 aa22.16■■□□□ 1.14
TRAIP-201ENST00000331456 PCGF6Q9BYE7 350 aa22.14■■□□□ 1.13
TRAIP-201ENST00000331456 UBTFP17480 764 aaKnown RBP22.13■■□□□ 1.13
TRAIP-201ENST00000331456 FANCD2Q9BXW9 1451 aa22.12■■□□□ 1.13
TRAIP-201ENST00000331456 CEP162Q5TB80 1403 aa22.09■■□□□ 1.13
TRAIP-201ENST00000331456 LAMC3Q9Y6N6 1575 aa22.09■■□□□ 1.13
TRAIP-201ENST00000331456 TRIM26Q12899 539 aaPredicted RBP22.07■■□□□ 1.12
TRAIP-201ENST00000331456 KIF27Q86VH2 1401 aa22.05■■□□□ 1.12
TRAIP-201ENST00000331456 NESP48681 1621 aa22.04■■□□□ 1.12
TRAIP-201ENST00000331456 FGD5Q6ZNL6 1462 aa21.98■■□□□ 1.11
TRAIP-201ENST00000331456 DNMBPQ6XZF7 1577 aa21.97■■□□□ 1.11
TRAIP-201ENST00000331456 RAPGEF2Q9Y4G8 1499 aa21.97■■□□□ 1.11
TRAIP-201ENST00000331456 ERICH3Q5RHP9 1530 aa21.96■■□□□ 1.11
TRAIP-201ENST00000331456 PRXQ9BXM0 1461 aa21.94■■□□□ 1.1
TRAIP-201ENST00000331456 PDS5BQ9NTI5 1447 aa21.94■■□□□ 1.1
TRAIP-201ENST00000331456 CUX2O14529 1486 aa21.91■■□□□ 1.1
TRAIP-201ENST00000331456 TOPBP1Q92547 1522 aa21.9■■□□□ 1.1
TRAIP-201ENST00000331456 CLIP1P30622 1438 aa21.85■■□□□ 1.09
TRAIP-201ENST00000331456 POLA1P09884 1462 aaPredicted RBP21.81■■□□□ 1.08
TRAIP-201ENST00000331456 URB2Q14146 1524 aaKnown RBP21.8■■□□□ 1.08
TRAIP-201ENST00000331456 IGF1RP08069 1367 aa21.79■■□□□ 1.08
TRAIP-201ENST00000331456 ABCA10Q8WWZ4 1543 aa21.79■■□□□ 1.08
TRAIP-201ENST00000331456 KIF21AQ7Z4S6 1674 aa21.77■■□□□ 1.08
TRAIP-201ENST00000331456 RAD54L2Q9Y4B4 1467 aa21.75■■□□□ 1.07
TRAIP-201ENST00000331456 HRCP23327 699 aa21.75■■□□□ 1.07
TRAIP-201ENST00000331456 PPARGC1BQ86YN6 1023 aaKnown RBP21.73■■□□□ 1.07
TRAIP-201ENST00000331456 CARMIL1Q5VZK9 1371 aa21.71■■□□□ 1.07
TRAIP-201ENST00000331456 VPS8Q8N3P4 1428 aa21.7■■□□□ 1.06
TRAIP-201ENST00000331456 RANGAP1P46060 587 aaPredicted RBP21.66■■□□□ 1.06
TRAIP-201ENST00000331456 WDR97A6NE52 1622 aa21.65■■□□□ 1.06
TRAIP-201ENST00000331456 MRC2Q9UBG0 1479 aa21.62■■□□□ 1.05
TRAIP-201ENST00000331456 CUL7Q14999 1698 aa21.61■■□□□ 1.05
TRAIP-201ENST00000331456 APLP2Q06481 763 aa21.58■■□□□ 1.05
TRAIP-201ENST00000331456 ABCA5Q8WWZ7 1642 aa21.56■■□□□ 1.04
TRAIP-201ENST00000331456 ARAP1Q96P48 1450 aa21.56■■□□□ 1.04
TRAIP-201ENST00000331456 GAPVD1Q14C86 1478 aa21.54■■□□□ 1.04
TRAIP-201ENST00000331456 TDRD9Q8NDG6 1382 aaKnown RBP21.53■■□□□ 1.04
TRAIP-201ENST00000331456 TARBP1Q13395 1621 aaKnown RBP21.52■■□□□ 1.04
TRAIP-201ENST00000331456 TTBK1Q5TCY1 1321 aaPredicted RBP21.52■■□□□ 1.04
TRAIP-201ENST00000331456 ARHGAP35Q9NRY4 1499 aa21.5■■□□□ 1.03
TRAIP-201ENST00000331456 WDR62O43379 1518 aa21.46■■□□□ 1.03
TRAIP-201ENST00000331456 ERCC6Q03468 1493 aa21.45■■□□□ 1.02
TRAIP-201ENST00000331456 IFT140Q96RY7 1462 aa21.41■■□□□ 1.02
TRAIP-201ENST00000331456 CTTNBP2Q8WZ74 1663 aa21.4■■□□□ 1.02
TRAIP-201ENST00000331456 ZEB1P37275 1124 aaPredicted RBP21.39■■□□□ 1.02
TRAIP-201ENST00000331456 PBRM1Q86U86 1689 aa21.37■■□□□ 1.01
TRAIP-201ENST00000331456 EFCAB5A4FU69 1503 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms