RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-231ENST00000622045 NISCHQ9Y2I1 1504 aa27.93■■■□□ 2.06
SYNRG-231ENST00000622045 SHROOM4Q9ULL8 1493 aa24.63■■□□□ 1.53
SYNRG-231ENST00000622045 SUPT5HO00267 1087 aaKnown RBP24.44■■□□□ 1.5
SYNRG-231ENST00000622045 HRCP23327 699 aa24.18■■□□□ 1.46
SYNRG-231ENST00000622045 PPARGC1BQ86YN6 1023 aaKnown RBP23.94■■□□□ 1.42
SYNRG-231ENST00000622045 PCGF6Q9BYE7 350 aa23.92■■□□□ 1.42
SYNRG-231ENST00000622045 DCAF8L2P0C7V8 631 aa23.86■■□□□ 1.41
SYNRG-231ENST00000622045 CHIC1Q5VXU3 224 aa23.68■■□□□ 1.38
SYNRG-231ENST00000622045 MYO15BQ96JP2 1530 aa23.63■■□□□ 1.37
SYNRG-231ENST00000622045 ZCCHC6Q5VYS8 1495 aaKnown RBP23.62■■□□□ 1.37
SYNRG-231ENST00000622045 CCDC180Q9P1Z9 1646 aa23.28■■□□□ 1.32
SYNRG-231ENST00000622045 LOC105371045A0A1W2PR82 267 aa23.19■■□□□ 1.3
SYNRG-231ENST00000622045 PELP1Q8IZL8 1130 aaKnown RBP23.12■■□□□ 1.29
SYNRG-231ENST00000622045 TRIM26Q12899 539 aaPredicted RBP22.95■■□□□ 1.26
SYNRG-231ENST00000622045 SCAF1Q9H7N4 1312 aaKnown RBP22.95■■□□□ 1.26
SYNRG-231ENST00000622045 DCAF1Q9Y4B6 1507 aa22.92■■□□□ 1.26
SYNRG-231ENST00000622045 ZEB1P37275 1124 aaPredicted RBP22.66■■□□□ 1.22
SYNRG-231ENST00000622045 FAM9AQ8IZU1 332 aaPredicted RBP22.65■■□□□ 1.22
SYNRG-231ENST00000622045 TRIM41Q8WV44 630 aa22.64■■□□□ 1.21
SYNRG-231ENST00000622045 EHMT2Q96KQ7 1210 aa22.6■■□□□ 1.21
SYNRG-231ENST00000622045 NEUROD1Q13562 356 aa22.37■■□□□ 1.17
SYNRG-231ENST00000622045 RSF1Q96T23 1441 aaPredicted RBP22.36■■□□□ 1.17
SYNRG-231ENST00000622045 ACIN1Q9UKV3 1341 aaKnown RBP22.34■■□□□ 1.17
SYNRG-231ENST00000622045 ABCC9O60706 1549 aa22.31■■□□□ 1.16
SYNRG-231ENST00000622045 GTF3C3Q9Y5Q9 886 aa22.27■■□□□ 1.16
SYNRG-231ENST00000622045 SCRIBQ14160 1630 aa22.26■■□□□ 1.15
SYNRG-231ENST00000622045 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.2■■□□□ 1.14
SYNRG-231ENST00000622045 MYT1Q01538 1121 aa22.12■■□□□ 1.13
SYNRG-231ENST00000622045 CCER1Q8TC90 406 aaPredicted RBP22.12■■□□□ 1.13
SYNRG-231ENST00000622045 RB1CC1Q8TDY2 1594 aa22.11■■□□□ 1.13
SYNRG-231ENST00000622045 CENPBP07199 599 aaPredicted RBP22.08■■□□□ 1.12
SYNRG-231ENST00000622045 DIEXFQ68CQ4 756 aaKnown RBP22.05■■□□□ 1.12
SYNRG-231ENST00000622045 TTBK1Q5TCY1 1321 aaPredicted RBP21.95■■□□□ 1.11
SYNRG-231ENST00000622045 YTHDC1Q96MU7 727 aaKnown RBP21.92■■□□□ 1.1
SYNRG-231ENST00000622045 CECR2Q9BXF3 1484 aa21.91■■□□□ 1.1
SYNRG-231ENST00000622045 MROH2BQ7Z745 1585 aa21.8■■□□□ 1.08
SYNRG-231ENST00000622045 WIZO95785 1651 aa21.66■■□□□ 1.06
SYNRG-231ENST00000622045 NACADO15069 1562 aa21.63■■□□□ 1.05
SYNRG-231ENST00000622045 UBTFP17480 764 aaKnown RBP21.61■■□□□ 1.05
SYNRG-231ENST00000622045 ZNF316A6NFI3 1004 aaPredicted RBP21.56■■□□□ 1.04
SYNRG-231ENST00000622045 MIER1Q8N108 512 aa21.52■■□□□ 1.04
SYNRG-231ENST00000622045 CEP162Q5TB80 1403 aa21.46■■□□□ 1.03
SYNRG-231ENST00000622045 CCDC88BA6NC98 1476 aa21.45■■□□□ 1.02
SYNRG-231ENST00000622045 CSRNP3Q8WYN3 585 aa21.44■■□□□ 1.02
SYNRG-231ENST00000622045 ABCC8Q09428 1581 aa21.43■■□□□ 1.02
SYNRG-231ENST00000622045 BAZ1AQ9NRL2 1556 aaPredicted RBP21.43■■□□□ 1.02
SYNRG-231ENST00000622045 SOGA1O94964 1423 aa21.39■■□□□ 1.02
SYNRG-231ENST00000622045 HNRNPUL2Q1KMD3 747 aaKnown RBP21.37■■□□□ 1.01
SYNRG-231ENST00000622045 WRNQ14191 1432 aaPredicted RBP eCLIP21.36■■□□□ 1.01
SYNRG-231ENST00000622045 TNIKQ9UKE5 1360 aa21.35■■□□□ 1.01
SYNRG-231ENST00000622045 APLP2Q06481 763 aa21.27■■□□□ 1
SYNRG-231ENST00000622045 RANGAP1P46060 587 aaPredicted RBP21.27■□□□□ 0.99
SYNRG-231ENST00000622045 TOP2AP11388 1531 aaKnown RBP21.25■□□□□ 0.99
SYNRG-231ENST00000622045 EIF4G1Q04637 1599 aaKnown RBP21.24■□□□□ 0.99
SYNRG-231ENST00000622045 RUSC2Q8N2Y8 1516 aa21.23■□□□□ 0.99
SYNRG-231ENST00000622045 EEA1Q15075 1411 aa21.21■□□□□ 0.99
SYNRG-231ENST00000622045 SMARCA2P51531 1590 aa21.16■□□□□ 0.98
SYNRG-231ENST00000622045 GOLGA3Q08378 1498 aa21.15■□□□□ 0.98
SYNRG-231ENST00000622045 PABPN1Q86U42 306 aaKnown RBP eCLIP21.15■□□□□ 0.98
SYNRG-231ENST00000622045 SMARCA4P51532 1647 aa21.13■□□□□ 0.97
SYNRG-231ENST00000622045 SUPT16HQ9Y5B9 1047 aaKnown RBP21.12■□□□□ 0.97
SYNRG-231ENST00000622045 CLIP1P30622 1438 aa21.03■□□□□ 0.96
SYNRG-231ENST00000622045 TSHZ2Q9NRE2 1034 aa21.03■□□□□ 0.96
SYNRG-231ENST00000622045 ANP32EQ9BTT0 268 aa21.01■□□□□ 0.95
SYNRG-231ENST00000622045 BCL11AQ9H165 835 aa21.01■□□□□ 0.95
SYNRG-231ENST00000622045 CEP164Q9UPV0 1460 aa20.98■□□□□ 0.95
SYNRG-231ENST00000622045 BCANQ96GW7 911 aa20.94■□□□□ 0.94
SYNRG-231ENST00000622045 VPS8Q8N3P4 1428 aa20.89■□□□□ 0.93
SYNRG-231ENST00000622045 RAPGEF2Q9Y4G8 1499 aa20.81■□□□□ 0.92
SYNRG-231ENST00000622045 CLSPNQ9HAW4 1339 aa20.79■□□□□ 0.92
SYNRG-231ENST00000622045 SYNJ1O43426 1573 aa20.78■□□□□ 0.92
SYNRG-231ENST00000622045 KCNH8Q96L42 1107 aa20.76■□□□□ 0.91
SYNRG-231ENST00000622045 ITGAEP38570 1179 aa20.75■□□□□ 0.91
SYNRG-231ENST00000622045 KIF21BO75037 1637 aa20.74■□□□□ 0.91
SYNRG-231ENST00000622045 UNC13AQ9UPW8 1703 aa20.71■□□□□ 0.91
SYNRG-231ENST00000622045 BAZ1BQ9UIG0 1483 aaKnown RBP20.7■□□□□ 0.9
SYNRG-231ENST00000622045 FKBP8Q14318 412 aa20.69■□□□□ 0.9
SYNRG-231ENST00000622045 KANK4Q5T7N3 995 aaPredicted RBP20.68■□□□□ 0.9
SYNRG-231ENST00000622045 DHX57Q6P158 1386 aaKnown RBP20.66■□□□□ 0.9
SYNRG-231ENST00000622045 ATAD2BQ9ULI0 1458 aa20.62■□□□□ 0.89
SYNRG-231ENST00000622045 BICRAQ9NZM4 1560 aa20.56■□□□□ 0.88
SYNRG-231ENST00000622045 RBM19Q9Y4C8 960 aaKnown RBP20.55■□□□□ 0.88
SYNRG-231ENST00000622045 PEG3Q9GZU2 1588 aa20.54■□□□□ 0.88
SYNRG-231ENST00000622045 NEFLP07196 543 aa20.48■□□□□ 0.87
SYNRG-231ENST00000622045 CCNB3Q8WWL7 1395 aa20.46■□□□□ 0.87
SYNRG-231ENST00000622045 ARAP1Q96P48 1450 aa20.46■□□□□ 0.87
SYNRG-231ENST00000622045 DDX10Q13206 875 aaKnown RBP20.45■□□□□ 0.86
SYNRG-231ENST00000622045 TRIM52Q96A61 297 aa20.43■□□□□ 0.86
SYNRG-231ENST00000622045 ATP1B4Q9UN42 357 aaPredicted RBP20.43■□□□□ 0.86
SYNRG-231ENST00000622045 PRXQ9BXM0 1461 aa20.43■□□□□ 0.86
SYNRG-231ENST00000622045 TOP2BQ02880 1626 aa20.43■□□□□ 0.86
SYNRG-231ENST00000622045 KIF27Q86VH2 1401 aa20.41■□□□□ 0.86
SYNRG-231ENST00000622045 FAM50AQ14320 339 aaKnown RBP20.39■□□□□ 0.85
SYNRG-231ENST00000622045 RRBP1Q9P2E9 1410 aaKnown RBP20.38■□□□□ 0.85
SYNRG-231ENST00000622045 ERICH3Q5RHP9 1530 aa20.37■□□□□ 0.85
SYNRG-231ENST00000622045 MSH5O43196 834 aa20.36■□□□□ 0.85
SYNRG-231ENST00000622045 HIRIP3Q9BW71 556 aaPredicted RBP20.36■□□□□ 0.85
SYNRG-231ENST00000622045 RAB3GAP2Q9H2M9 1393 aa20.34■□□□□ 0.85
SYNRG-231ENST00000622045 SIN3AQ96ST3 1273 aa20.32■□□□□ 0.84
SYNRG-231ENST00000622045 ERICH6Q7L0X2 663 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms