RNA–Protein interactions for RNA: ENST00000591259.5

HKR1-220, Transcript of HKR1, GLI-Kruppel zinc finger family member, humanhuman

TSL 1 (best) BASIC

Gene HKR1, Length 734 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HKR1-220ENST00000591259 NISCHQ9Y2I1 1504 aa33.01■■■□□ 2.87
HKR1-220ENST00000591259 CCDC180Q9P1Z9 1646 aa29.26■■■□□ 2.27
HKR1-220ENST00000591259 ABCC9O60706 1549 aa28.71■■■□□ 2.19
HKR1-220ENST00000591259 AEBP2Q6ZN18 517 aaPredicted RBP28.24■■■□□ 2.11
HKR1-220ENST00000591259 DCAF8L2P0C7V8 631 aa27.65■■■□□ 2.02
HKR1-220ENST00000591259 RB1CC1Q8TDY2 1594 aa27.56■■■□□ 2
HKR1-220ENST00000591259 NACADO15069 1562 aa27.54■■■□□ 2
HKR1-220ENST00000591259 ZCCHC6Q5VYS8 1495 aaKnown RBP27.51■■■□□ 2
HKR1-220ENST00000591259 MYO15BQ96JP2 1530 aa27.36■■□□□ 1.97
HKR1-220ENST00000591259 DCAF1Q9Y4B6 1507 aa27.27■■□□□ 1.96
HKR1-220ENST00000591259 PABPN1Q86U42 306 aaKnown RBP eCLIP26.87■■□□□ 1.89
HKR1-220ENST00000591259 UNC13AQ9UPW8 1703 aa26.87■■□□□ 1.89
HKR1-220ENST00000591259 SCRIBQ14160 1630 aa26.79■■□□□ 1.88
HKR1-220ENST00000591259 BICRAQ9NZM4 1560 aa26.74■■□□□ 1.87
HKR1-220ENST00000591259 CHIC1Q5VXU3 224 aa26.54■■□□□ 1.84
HKR1-220ENST00000591259 SHROOM4Q9ULL8 1493 aa26.43■■□□□ 1.82
HKR1-220ENST00000591259 DNAJC5BQ9UF47 199 aa26.33■■□□□ 1.81
HKR1-220ENST00000591259 EIF4G1Q04637 1599 aaKnown RBP26.03■■□□□ 1.76
HKR1-220ENST00000591259 CC2D2AQ9P2K1 1620 aa25.92■■□□□ 1.74
HKR1-220ENST00000591259 CECR2Q9BXF3 1484 aa25.78■■□□□ 1.72
HKR1-220ENST00000591259 SMARCA4P51532 1647 aa25.59■■□□□ 1.69
HKR1-220ENST00000591259 BAZ1AQ9NRL2 1556 aaPredicted RBP25.56■■□□□ 1.68
HKR1-220ENST00000591259 ATAD2BQ9ULI0 1458 aa25.47■■□□□ 1.67
HKR1-220ENST00000591259 MROH2BQ7Z745 1585 aa25.46■■□□□ 1.67
HKR1-220ENST00000591259 NCAPD3P42695 1498 aa25.43■■□□□ 1.66
HKR1-220ENST00000591259 SMARCA2P51531 1590 aa25.42■■□□□ 1.66
HKR1-220ENST00000591259 PEG3Q9GZU2 1588 aa25.31■■□□□ 1.64
HKR1-220ENST00000591259 HMGXB3Q12766 1538 aa25.3■■□□□ 1.64
HKR1-220ENST00000591259 BAZ1BQ9UIG0 1483 aaKnown RBP25.27■■□□□ 1.64
HKR1-220ENST00000591259 RSF1Q96T23 1441 aaPredicted RBP25.2■■□□□ 1.62
HKR1-220ENST00000591259 WIZO95785 1651 aa25.16■■□□□ 1.62
HKR1-220ENST00000591259 TOP2AP11388 1531 aaKnown RBP24.91■■□□□ 1.58
HKR1-220ENST00000591259 NESP48681 1621 aa24.85■■□□□ 1.57
HKR1-220ENST00000591259 ERCC6Q03468 1493 aa24.74■■□□□ 1.55
HKR1-220ENST00000591259 LAMC3Q9Y6N6 1575 aa24.73■■□□□ 1.55
HKR1-220ENST00000591259 CADPSQ9ULU8 1353 aa24.71■■□□□ 1.55
HKR1-220ENST00000591259 SUPT5HO00267 1087 aaKnown RBP24.64■■□□□ 1.54
HKR1-220ENST00000591259 CCDC88BA6NC98 1476 aa24.64■■□□□ 1.53
HKR1-220ENST00000591259 PDS5BQ9NTI5 1447 aa24.61■■□□□ 1.53
HKR1-220ENST00000591259 CFTRP13569 1480 aa24.57■■□□□ 1.52
HKR1-220ENST00000591259 KIF21AQ7Z4S6 1674 aa24.49■■□□□ 1.51
HKR1-220ENST00000591259 FANCD2Q9BXW9 1451 aa24.44■■□□□ 1.5
HKR1-220ENST00000591259 CUX2O14529 1486 aa24.42■■□□□ 1.5
HKR1-220ENST00000591259 THOC2Q8NI27 1593 aaKnown RBP24.42■■□□□ 1.5
HKR1-220ENST00000591259 CEP164Q9UPV0 1460 aa24.4■■□□□ 1.5
HKR1-220ENST00000591259 MRC2Q9UBG0 1479 aa24.36■■□□□ 1.49
HKR1-220ENST00000591259 SENP3Q9H4L4 574 aaPredicted RBP24.28■■□□□ 1.48
HKR1-220ENST00000591259 PRDM2Q13029 1718 aa24.27■■□□□ 1.48
HKR1-220ENST00000591259 WDR62O43379 1518 aa24.25■■□□□ 1.47
HKR1-220ENST00000591259 URB2Q14146 1524 aaKnown RBP24.19■■□□□ 1.46
HKR1-220ENST00000591259 TOPBP1Q92547 1522 aa24.05■■□□□ 1.44
HKR1-220ENST00000591259 ABCC8Q09428 1581 aa24■■□□□ 1.43
HKR1-220ENST00000591259 DNMBPQ6XZF7 1577 aa23.99■■□□□ 1.43
HKR1-220ENST00000591259 CUX1P39880 1505 aa23.89■■□□□ 1.41
HKR1-220ENST00000591259 IFT140Q96RY7 1462 aa23.88■■□□□ 1.41
HKR1-220ENST00000591259 POLA1P09884 1462 aaPredicted RBP23.85■■□□□ 1.41
HKR1-220ENST00000591259 PHF23Q9BUL5 403 aaPredicted RBP23.84■■□□□ 1.41
HKR1-220ENST00000591259 FGD5Q6ZNL6 1462 aa23.8■■□□□ 1.4
HKR1-220ENST00000591259 ZNF608Q9ULD9 1512 aaPredicted RBP23.79■■□□□ 1.4
HKR1-220ENST00000591259 RAD54L2Q9Y4B4 1467 aa23.77■■□□□ 1.4
HKR1-220ENST00000591259 SOGA1O94964 1423 aa23.76■■□□□ 1.39
HKR1-220ENST00000591259 WRNQ14191 1432 aaPredicted RBP eCLIP23.76■■□□□ 1.39
HKR1-220ENST00000591259 TARBP1Q13395 1621 aaKnown RBP23.74■■□□□ 1.39
HKR1-220ENST00000591259 SYNJ1O43426 1573 aa23.68■■□□□ 1.38
HKR1-220ENST00000591259 AQRO60306 1485 aaKnown RBP eCLIP23.68■■□□□ 1.38
HKR1-220ENST00000591259 EIF4G3O43432 1585 aaKnown RBP23.66■■□□□ 1.38
HKR1-220ENST00000591259 TOP2BQ02880 1626 aa23.66■■□□□ 1.38
HKR1-220ENST00000591259 DNAJC5Q9H3Z4 198 aa23.65■■□□□ 1.38
HKR1-220ENST00000591259 TDRD9Q8NDG6 1382 aaKnown RBP23.64■■□□□ 1.37
HKR1-220ENST00000591259 BIVM-ERCC5R4GMW8 1640 aa23.62■■□□□ 1.37
HKR1-220ENST00000591259 ABCA10Q8WWZ4 1543 aa23.55■■□□□ 1.36
HKR1-220ENST00000591259 WDR97A6NE52 1622 aa23.53■■□□□ 1.36
HKR1-220ENST00000591259 GAPVD1Q14C86 1478 aa23.48■■□□□ 1.35
HKR1-220ENST00000591259 GRIN2BQ13224 1484 aa23.47■■□□□ 1.35
HKR1-220ENST00000591259 SNAPC4Q5SXM2 1469 aa23.45■■□□□ 1.34
HKR1-220ENST00000591259 OSCARQ8IYS5 282 aa23.44■■□□□ 1.34
HKR1-220ENST00000591259 ABCA5Q8WWZ7 1642 aa23.44■■□□□ 1.34
HKR1-220ENST00000591259 FBLN2P98095 1184 aa23.41■■□□□ 1.34
HKR1-220ENST00000591259 MAGI1Q96QZ7 1491 aaPredicted RBP23.38■■□□□ 1.33
HKR1-220ENST00000591259 PBRM1Q86U86 1689 aa23.36■■□□□ 1.33
HKR1-220ENST00000591259 CHMP7Q8WUX9 453 aaPredicted RBP23.33■■□□□ 1.33
HKR1-220ENST00000591259 CHD1O14646 1710 aa23.31■■□□□ 1.32
HKR1-220ENST00000591259 SYNJ2O15056 1496 aa23.3■■□□□ 1.32
HKR1-220ENST00000591259 ERICH3Q5RHP9 1530 aa23.26■■□□□ 1.31
HKR1-220ENST00000591259 KIF27Q86VH2 1401 aa23.25■■□□□ 1.31
HKR1-220ENST00000591259 TRIM41Q8WV44 630 aa23.24■■□□□ 1.31
HKR1-220ENST00000591259 ADAMTS12P58397 1594 aa23.23■■□□□ 1.31
HKR1-220ENST00000591259 FHAD1B1AJZ9 1412 aa23.2■■□□□ 1.3
HKR1-220ENST00000591259 GRIN2AQ12879 1464 aa23.17■■□□□ 1.3
HKR1-220ENST00000591259 IGF1RP08069 1367 aa23.15■■□□□ 1.3
HKR1-220ENST00000591259 CLASP1Q7Z460 1538 aa23.1■■□□□ 1.29
HKR1-220ENST00000591259 RUSC2Q8N2Y8 1516 aa23.07■■□□□ 1.28
HKR1-220ENST00000591259 ARHGEF11O15085 1522 aa23.06■■□□□ 1.28
HKR1-220ENST00000591259 NUP160Q12769 1436 aa23.06■■□□□ 1.28
HKR1-220ENST00000591259 CEP170Q5SW79 1584 aa23.04■■□□□ 1.28
HKR1-220ENST00000591259 RIMBP3CA6NJZ7 1639 aa23.03■■□□□ 1.28
HKR1-220ENST00000591259 RIMBP3BA6NNM3 1639 aa23.03■■□□□ 1.28
HKR1-220ENST00000591259 RIMBP3Q9UFD9 1639 aa23.03■■□□□ 1.28
HKR1-220ENST00000591259 CUL7Q14999 1698 aa23.03■■□□□ 1.28
HKR1-220ENST00000591259 CARMIL1Q5VZK9 1371 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms