RNA–Protein interactions for RNA: ENST00000412964.6

CCDC138-203, Transcript of coiled-coil domain containing 138, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC138, Length 2,250 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138-203ENST00000412964 NISCHQ9Y2I1 1504 aa31.45■■■□□ 2.63
CCDC138-203ENST00000412964 CCDC180Q9P1Z9 1646 aa27.41■■□□□ 1.98
CCDC138-203ENST00000412964 ZCCHC6Q5VYS8 1495 aaKnown RBP26.41■■□□□ 1.82
CCDC138-203ENST00000412964 DCAF8L2P0C7V8 631 aa26.23■■□□□ 1.79
CCDC138-203ENST00000412964 ABCC9O60706 1549 aa26.08■■□□□ 1.77
CCDC138-203ENST00000412964 DCAF1Q9Y4B6 1507 aa25.91■■□□□ 1.74
CCDC138-203ENST00000412964 SHROOM4Q9ULL8 1493 aa25.86■■□□□ 1.73
CCDC138-203ENST00000412964 MYO15BQ96JP2 1530 aa25.59■■□□□ 1.69
CCDC138-203ENST00000412964 NACADO15069 1562 aa25.54■■□□□ 1.68
CCDC138-203ENST00000412964 RB1CC1Q8TDY2 1594 aa25.37■■□□□ 1.65
CCDC138-203ENST00000412964 SCRIBQ14160 1630 aa25.34■■□□□ 1.65
CCDC138-203ENST00000412964 UNC13AQ9UPW8 1703 aa24.9■■□□□ 1.58
CCDC138-203ENST00000412964 SUPT5HO00267 1087 aaKnown RBP24.87■■□□□ 1.57
CCDC138-203ENST00000412964 PABPN1Q86U42 306 aaKnown RBP eCLIP24.63■■□□□ 1.53
CCDC138-203ENST00000412964 BICRAQ9NZM4 1560 aa24.57■■□□□ 1.52
CCDC138-203ENST00000412964 CECR2Q9BXF3 1484 aa24.5■■□□□ 1.51
CCDC138-203ENST00000412964 RSF1Q96T23 1441 aaPredicted RBP24.41■■□□□ 1.5
CCDC138-203ENST00000412964 MROH2BQ7Z745 1585 aa24.34■■□□□ 1.49
CCDC138-203ENST00000412964 BAZ1AQ9NRL2 1556 aaPredicted RBP24.31■■□□□ 1.48
CCDC138-203ENST00000412964 SMARCA4P51532 1647 aa24.21■■□□□ 1.47
CCDC138-203ENST00000412964 WIZO95785 1651 aa24.18■■□□□ 1.46
CCDC138-203ENST00000412964 EIF4G1Q04637 1599 aaKnown RBP23.88■■□□□ 1.41
CCDC138-203ENST00000412964 TOP2AP11388 1531 aaKnown RBP23.86■■□□□ 1.41
CCDC138-203ENST00000412964 PEG3Q9GZU2 1588 aa23.83■■□□□ 1.41
CCDC138-203ENST00000412964 ATAD2BQ9ULI0 1458 aa23.8■■□□□ 1.4
CCDC138-203ENST00000412964 SMARCA2P51531 1590 aa23.79■■□□□ 1.4
CCDC138-203ENST00000412964 BAZ1BQ9UIG0 1483 aaKnown RBP23.72■■□□□ 1.39
CCDC138-203ENST00000412964 CHIC1Q5VXU3 224 aa23.66■■□□□ 1.38
CCDC138-203ENST00000412964 CCDC88BA6NC98 1476 aa23.64■■□□□ 1.38
CCDC138-203ENST00000412964 CC2D2AQ9P2K1 1620 aa23.56■■□□□ 1.36
CCDC138-203ENST00000412964 NCAPD3P42695 1498 aa23.55■■□□□ 1.36
CCDC138-203ENST00000412964 HMGXB3Q12766 1538 aa23.53■■□□□ 1.36
CCDC138-203ENST00000412964 TRIM41Q8WV44 630 aa23.33■■□□□ 1.32
CCDC138-203ENST00000412964 ABCC8Q09428 1581 aa23.22■■□□□ 1.31
CCDC138-203ENST00000412964 CFTRP13569 1480 aa23.05■■□□□ 1.28
CCDC138-203ENST00000412964 WRNQ14191 1432 aaPredicted RBP eCLIP23.02■■□□□ 1.28
CCDC138-203ENST00000412964 CADPSQ9ULU8 1353 aa23■■□□□ 1.27
CCDC138-203ENST00000412964 DNAJC5BQ9UF47 199 aa22.99■■□□□ 1.27
CCDC138-203ENST00000412964 FAM9AQ8IZU1 332 aaPredicted RBP22.99■■□□□ 1.27
CCDC138-203ENST00000412964 PRDM2Q13029 1718 aa22.97■■□□□ 1.27
CCDC138-203ENST00000412964 SYNJ1O43426 1573 aa22.92■■□□□ 1.26
CCDC138-203ENST00000412964 NESP48681 1621 aa22.87■■□□□ 1.25
CCDC138-203ENST00000412964 LOC105371045A0A1W2PR82 267 aa22.85■■□□□ 1.25
CCDC138-203ENST00000412964 LAMC3Q9Y6N6 1575 aa22.8■■□□□ 1.24
CCDC138-203ENST00000412964 TOP2BQ02880 1626 aa22.8■■□□□ 1.24
CCDC138-203ENST00000412964 FANCD2Q9BXW9 1451 aa22.78■■□□□ 1.24
CCDC138-203ENST00000412964 EHMT2Q96KQ7 1210 aa22.77■■□□□ 1.23
CCDC138-203ENST00000412964 BIVM-ERCC5R4GMW8 1640 aa22.76■■□□□ 1.23
CCDC138-203ENST00000412964 CUX1P39880 1505 aa22.75■■□□□ 1.23
CCDC138-203ENST00000412964 SOGA1O94964 1423 aa22.75■■□□□ 1.23
CCDC138-203ENST00000412964 RUSC2Q8N2Y8 1516 aa22.66■■□□□ 1.22
CCDC138-203ENST00000412964 CEP164Q9UPV0 1460 aa22.65■■□□□ 1.22
CCDC138-203ENST00000412964 PDS5BQ9NTI5 1447 aa22.65■■□□□ 1.22
CCDC138-203ENST00000412964 EEA1Q15075 1411 aa22.61■■□□□ 1.21
CCDC138-203ENST00000412964 KIF21AQ7Z4S6 1674 aa22.6■■□□□ 1.21
CCDC138-203ENST00000412964 CSRNP3Q8WYN3 585 aa22.56■■□□□ 1.2
CCDC138-203ENST00000412964 DNMBPQ6XZF7 1577 aa22.54■■□□□ 1.2
CCDC138-203ENST00000412964 FGD5Q6ZNL6 1462 aa22.54■■□□□ 1.2
CCDC138-203ENST00000412964 TOPBP1Q92547 1522 aa22.51■■□□□ 1.19
CCDC138-203ENST00000412964 URB2Q14146 1524 aaKnown RBP22.48■■□□□ 1.19
CCDC138-203ENST00000412964 KIF27Q86VH2 1401 aa22.43■■□□□ 1.18
CCDC138-203ENST00000412964 POLA1P09884 1462 aaPredicted RBP22.42■■□□□ 1.18
CCDC138-203ENST00000412964 CUX2O14529 1486 aa22.41■■□□□ 1.18
CCDC138-203ENST00000412964 ERCC6Q03468 1493 aa22.39■■□□□ 1.17
CCDC138-203ENST00000412964 RAD54L2Q9Y4B4 1467 aa22.38■■□□□ 1.17
CCDC138-203ENST00000412964 UBTFP17480 764 aaKnown RBP22.37■■□□□ 1.17
CCDC138-203ENST00000412964 GOLGA3Q08378 1498 aa22.36■■□□□ 1.17
CCDC138-203ENST00000412964 MRC2Q9UBG0 1479 aa22.35■■□□□ 1.17
CCDC138-203ENST00000412964 KIF21BO75037 1637 aa22.35■■□□□ 1.17
CCDC138-203ENST00000412964 RAPGEF2Q9Y4G8 1499 aa22.28■■□□□ 1.16
CCDC138-203ENST00000412964 ABCA10Q8WWZ4 1543 aa22.28■■□□□ 1.16
CCDC138-203ENST00000412964 TNIKQ9UKE5 1360 aa22.25■■□□□ 1.15
CCDC138-203ENST00000412964 PRXQ9BXM0 1461 aa22.22■■□□□ 1.15
CCDC138-203ENST00000412964 WDR97A6NE52 1622 aa22.22■■□□□ 1.15
CCDC138-203ENST00000412964 WDR62O43379 1518 aa22.21■■□□□ 1.15
CCDC138-203ENST00000412964 IGF1RP08069 1367 aa22.2■■□□□ 1.14
CCDC138-203ENST00000412964 CEP162Q5TB80 1403 aa22.19■■□□□ 1.14
CCDC138-203ENST00000412964 ERICH3Q5RHP9 1530 aa22.19■■□□□ 1.14
CCDC138-203ENST00000412964 TDRD9Q8NDG6 1382 aaKnown RBP22.18■■□□□ 1.14
CCDC138-203ENST00000412964 THOC2Q8NI27 1593 aaKnown RBP22.16■■□□□ 1.14
CCDC138-203ENST00000412964 TARBP1Q13395 1621 aaKnown RBP22.16■■□□□ 1.14
CCDC138-203ENST00000412964 RANGAP1P46060 587 aaPredicted RBP22.13■■□□□ 1.13
CCDC138-203ENST00000412964 CARMIL1Q5VZK9 1371 aa22.12■■□□□ 1.13
CCDC138-203ENST00000412964 ABCA5Q8WWZ7 1642 aa22.11■■□□□ 1.13
CCDC138-203ENST00000412964 GAPVD1Q14C86 1478 aa22.11■■□□□ 1.13
CCDC138-203ENST00000412964 IFT140Q96RY7 1462 aa22.06■■□□□ 1.12
CCDC138-203ENST00000412964 CUL7Q14999 1698 aa22.05■■□□□ 1.12
CCDC138-203ENST00000412964 CLIP1P30622 1438 aa22.03■■□□□ 1.12
CCDC138-203ENST00000412964 AQRO60306 1485 aaKnown RBP eCLIP22.03■■□□□ 1.12
CCDC138-203ENST00000412964 PBRM1Q86U86 1689 aa22■■□□□ 1.11
CCDC138-203ENST00000412964 ZNF608Q9ULD9 1512 aaPredicted RBP22■■□□□ 1.11
CCDC138-203ENST00000412964 EIF4G3O43432 1585 aaKnown RBP21.92■■□□□ 1.1
CCDC138-203ENST00000412964 GRIN2BQ13224 1484 aa21.92■■□□□ 1.1
CCDC138-203ENST00000412964 PPARGC1BQ86YN6 1023 aaKnown RBP21.88■■□□□ 1.09
CCDC138-203ENST00000412964 CTTNBP2Q8WZ74 1663 aa21.84■■□□□ 1.09
CCDC138-203ENST00000412964 ADAMTS12P58397 1594 aa21.84■■□□□ 1.09
CCDC138-203ENST00000412964 FHAD1B1AJZ9 1412 aa21.84■■□□□ 1.09
CCDC138-203ENST00000412964 PCGF6Q9BYE7 350 aa21.82■■□□□ 1.08
CCDC138-203ENST00000412964 SNAPC4Q5SXM2 1469 aa21.81■■□□□ 1.08
CCDC138-203ENST00000412964 VPS8Q8N3P4 1428 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms