RNA–Protein interactions for RNA: ENST00000592683.5

TUBB6-214, Transcript of tubulin beta 6 class V, humanhuman

TSL 4 BASIC

Gene TUBB6, Length 481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB6-214ENST00000592683 NISCHQ9Y2I1 1504 aa32.97■■■□□ 2.87
TUBB6-214ENST00000592683 CCDC180Q9P1Z9 1646 aa29.29■■■□□ 2.28
TUBB6-214ENST00000592683 ABCC9O60706 1549 aa28.75■■■□□ 2.19
TUBB6-214ENST00000592683 DCAF8L2P0C7V8 631 aa27.65■■■□□ 2.02
TUBB6-214ENST00000592683 RB1CC1Q8TDY2 1594 aa27.6■■■□□ 2.01
TUBB6-214ENST00000592683 NACADO15069 1562 aa27.55■■■□□ 2
TUBB6-214ENST00000592683 ZCCHC6Q5VYS8 1495 aaKnown RBP27.47■■□□□ 1.99
TUBB6-214ENST00000592683 MYO15BQ96JP2 1530 aa27.32■■□□□ 1.96
TUBB6-214ENST00000592683 DCAF1Q9Y4B6 1507 aa27.23■■□□□ 1.95
TUBB6-214ENST00000592683 UNC13AQ9UPW8 1703 aa26.96■■□□□ 1.91
TUBB6-214ENST00000592683 PABPN1Q86U42 306 aaKnown RBP eCLIP26.87■■□□□ 1.89
TUBB6-214ENST00000592683 SCRIBQ14160 1630 aa26.83■■□□□ 1.88
TUBB6-214ENST00000592683 BICRAQ9NZM4 1560 aa26.74■■□□□ 1.87
TUBB6-214ENST00000592683 SHROOM4Q9ULL8 1493 aa26.43■■□□□ 1.82
TUBB6-214ENST00000592683 DNAJC5BQ9UF47 199 aa26.33■■□□□ 1.81
TUBB6-214ENST00000592683 EIF4G1Q04637 1599 aaKnown RBP26.07■■□□□ 1.76
TUBB6-214ENST00000592683 CC2D2AQ9P2K1 1620 aa25.97■■□□□ 1.75
TUBB6-214ENST00000592683 CECR2Q9BXF3 1484 aa25.81■■□□□ 1.72
TUBB6-214ENST00000592683 SMARCA4P51532 1647 aa25.59■■□□□ 1.69
TUBB6-214ENST00000592683 BAZ1AQ9NRL2 1556 aaPredicted RBP25.56■■□□□ 1.68
TUBB6-214ENST00000592683 ATAD2BQ9ULI0 1458 aa25.45■■□□□ 1.66
TUBB6-214ENST00000592683 MROH2BQ7Z745 1585 aa25.43■■□□□ 1.66
TUBB6-214ENST00000592683 SMARCA2P51531 1590 aa25.42■■□□□ 1.66
TUBB6-214ENST00000592683 NCAPD3P42695 1498 aa25.4■■□□□ 1.66
TUBB6-214ENST00000592683 HMGXB3Q12766 1538 aa25.3■■□□□ 1.64
TUBB6-214ENST00000592683 PEG3Q9GZU2 1588 aa25.3■■□□□ 1.64
TUBB6-214ENST00000592683 BAZ1BQ9UIG0 1483 aaKnown RBP25.28■■□□□ 1.64
TUBB6-214ENST00000592683 WIZO95785 1651 aa25.17■■□□□ 1.62
TUBB6-214ENST00000592683 RSF1Q96T23 1441 aaPredicted RBP25.12■■□□□ 1.61
TUBB6-214ENST00000592683 TOP2AP11388 1531 aaKnown RBP24.89■■□□□ 1.57
TUBB6-214ENST00000592683 NESP48681 1621 aa24.86■■□□□ 1.57
TUBB6-214ENST00000592683 ERCC6Q03468 1493 aa24.8■■□□□ 1.56
TUBB6-214ENST00000592683 LAMC3Q9Y6N6 1575 aa24.76■■□□□ 1.55
TUBB6-214ENST00000592683 CADPSQ9ULU8 1353 aa24.69■■□□□ 1.54
TUBB6-214ENST00000592683 PDS5BQ9NTI5 1447 aa24.61■■□□□ 1.53
TUBB6-214ENST00000592683 CCDC88BA6NC98 1476 aa24.59■■□□□ 1.53
TUBB6-214ENST00000592683 SUPT5HO00267 1087 aaKnown RBP24.58■■□□□ 1.53
TUBB6-214ENST00000592683 KIF21AQ7Z4S6 1674 aa24.56■■□□□ 1.52
TUBB6-214ENST00000592683 CFTRP13569 1480 aa24.53■■□□□ 1.52
TUBB6-214ENST00000592683 THOC2Q8NI27 1593 aaKnown RBP24.46■■□□□ 1.51
TUBB6-214ENST00000592683 CUX2O14529 1486 aa24.46■■□□□ 1.51
TUBB6-214ENST00000592683 FANCD2Q9BXW9 1451 aa24.45■■□□□ 1.5
TUBB6-214ENST00000592683 CEP164Q9UPV0 1460 aa24.42■■□□□ 1.5
TUBB6-214ENST00000592683 MRC2Q9UBG0 1479 aa24.37■■□□□ 1.49
TUBB6-214ENST00000592683 PRDM2Q13029 1718 aa24.35■■□□□ 1.49
TUBB6-214ENST00000592683 WDR62O43379 1518 aa24.27■■□□□ 1.48
TUBB6-214ENST00000592683 URB2Q14146 1524 aaKnown RBP24.19■■□□□ 1.46
TUBB6-214ENST00000592683 TOPBP1Q92547 1522 aa24.04■■□□□ 1.44
TUBB6-214ENST00000592683 DNMBPQ6XZF7 1577 aa24.01■■□□□ 1.43
TUBB6-214ENST00000592683 ABCC8Q09428 1581 aa24■■□□□ 1.43
TUBB6-214ENST00000592683 IFT140Q96RY7 1462 aa23.88■■□□□ 1.41
TUBB6-214ENST00000592683 CUX1P39880 1505 aa23.86■■□□□ 1.41
TUBB6-214ENST00000592683 POLA1P09884 1462 aaPredicted RBP23.84■■□□□ 1.41
TUBB6-214ENST00000592683 ZNF608Q9ULD9 1512 aaPredicted RBP23.79■■□□□ 1.4
TUBB6-214ENST00000592683 FGD5Q6ZNL6 1462 aa23.79■■□□□ 1.4
TUBB6-214ENST00000592683 RAD54L2Q9Y4B4 1467 aa23.75■■□□□ 1.39
TUBB6-214ENST00000592683 TARBP1Q13395 1621 aaKnown RBP23.75■■□□□ 1.39
TUBB6-214ENST00000592683 SOGA1O94964 1423 aa23.74■■□□□ 1.39
TUBB6-214ENST00000592683 EIF4G3O43432 1585 aaKnown RBP23.71■■□□□ 1.39
TUBB6-214ENST00000592683 WRNQ14191 1432 aaPredicted RBP eCLIP23.71■■□□□ 1.39
TUBB6-214ENST00000592683 DNAJC5Q9H3Z4 198 aa23.69■■□□□ 1.38
TUBB6-214ENST00000592683 SYNJ1O43426 1573 aa23.66■■□□□ 1.38
TUBB6-214ENST00000592683 AQRO60306 1485 aaKnown RBP eCLIP23.66■■□□□ 1.382e-6■■■□□ 15.6
TUBB6-214ENST00000592683 TOP2BQ02880 1626 aa23.64■■□□□ 1.38
TUBB6-214ENST00000592683 BIVM-ERCC5R4GMW8 1640 aa23.63■■□□□ 1.37
TUBB6-214ENST00000592683 TDRD9Q8NDG6 1382 aaKnown RBP23.63■■□□□ 1.37
TUBB6-214ENST00000592683 WDR97A6NE52 1622 aa23.56■■□□□ 1.36
TUBB6-214ENST00000592683 ABCA10Q8WWZ4 1543 aa23.53■■□□□ 1.36
TUBB6-214ENST00000592683 GAPVD1Q14C86 1478 aa23.47■■□□□ 1.35
TUBB6-214ENST00000592683 GRIN2BQ13224 1484 aa23.46■■□□□ 1.35
TUBB6-214ENST00000592683 SNAPC4Q5SXM2 1469 aa23.46■■□□□ 1.35
TUBB6-214ENST00000592683 OSCARQ8IYS5 282 aa23.46■■□□□ 1.35
TUBB6-214ENST00000592683 ABCA5Q8WWZ7 1642 aa23.44■■□□□ 1.34
TUBB6-214ENST00000592683 FBLN2P98095 1184 aa23.44■■□□□ 1.34
TUBB6-214ENST00000592683 PBRM1Q86U86 1689 aa23.43■■□□□ 1.34
TUBB6-214ENST00000592683 CHD1O14646 1710 aa23.4■■□□□ 1.34
TUBB6-214ENST00000592683 MAGI1Q96QZ7 1491 aaPredicted RBP23.39■■□□□ 1.34
TUBB6-214ENST00000592683 CHMP7Q8WUX9 453 aaPredicted RBP23.33■■□□□ 1.33
TUBB6-214ENST00000592683 SYNJ2O15056 1496 aa23.3■■□□□ 1.32
TUBB6-214ENST00000592683 ERICH3Q5RHP9 1530 aa23.25■■□□□ 1.31
TUBB6-214ENST00000592683 ADAMTS12P58397 1594 aa23.24■■□□□ 1.31
TUBB6-214ENST00000592683 KIF27Q86VH2 1401 aa23.22■■□□□ 1.31
TUBB6-214ENST00000592683 FHAD1B1AJZ9 1412 aa23.19■■□□□ 1.3
TUBB6-214ENST00000592683 TRIM41Q8WV44 630 aa23.18■■□□□ 1.3
TUBB6-214ENST00000592683 GRIN2AQ12879 1464 aa23.17■■□□□ 1.3
TUBB6-214ENST00000592683 CLASP1Q7Z460 1538 aa23.13■■□□□ 1.29
TUBB6-214ENST00000592683 RIMBP3CA6NJZ7 1639 aa23.11■■□□□ 1.29
TUBB6-214ENST00000592683 RIMBP3BA6NNM3 1639 aa23.11■■□□□ 1.29
TUBB6-214ENST00000592683 RIMBP3Q9UFD9 1639 aa23.11■■□□□ 1.29
TUBB6-214ENST00000592683 ARHGEF11O15085 1522 aa23.1■■□□□ 1.29
TUBB6-214ENST00000592683 IGF1RP08069 1367 aa23.09■■□□□ 1.29
TUBB6-214ENST00000592683 CUL7Q14999 1698 aa23.06■■□□□ 1.28
TUBB6-214ENST00000592683 CEP170Q5SW79 1584 aa23.06■■□□□ 1.28
TUBB6-214ENST00000592683 NUP160Q12769 1436 aa23.03■■□□□ 1.28
TUBB6-214ENST00000592683 RUSC2Q8N2Y8 1516 aa23.01■■□□□ 1.27
TUBB6-214ENST00000592683 CARMIL1Q5VZK9 1371 aa22.98■■□□□ 1.27
TUBB6-214ENST00000592683 ARAP1Q96P48 1450 aa22.92■■□□□ 1.26
TUBB6-214ENST00000592683 CYB5RLQ6IPT4 315 aa22.91■■□□□ 1.26
TUBB6-214ENST00000592683 CHIC1Q5VXU3 224 aa22.86■■□□□ 1.25
TUBB6-214ENST00000592683 SHROOM2Q13796 1616 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms