RNA–Protein interactions for RNA: ENST00000397852.5

ITGB2-206, Transcript of integrin subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGB2, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB2-206ENST00000397852 NISCHQ9Y2I1 1504 aa29.52■■■□□ 2.32
ITGB2-206ENST00000397852 PELP1Q8IZL8 1130 aaKnown RBP25.9■■□□□ 1.74
ITGB2-206ENST00000397852 MYT1Q01538 1121 aa25.38■■□□□ 1.65
ITGB2-206ENST00000397852 SHROOM4Q9ULL8 1493 aa25.2■■□□□ 1.62
ITGB2-206ENST00000397852 CCDC180Q9P1Z9 1646 aa25.14■■□□□ 1.62
ITGB2-206ENST00000397852 ZCCHC6Q5VYS8 1495 aaKnown RBP24.95■■□□□ 1.58
ITGB2-206ENST00000397852 SUPT5HO00267 1087 aaKnown RBP24.62■■□□□ 1.53
ITGB2-206ENST00000397852 DCAF8L2P0C7V8 631 aa24.59■■□□□ 1.53
ITGB2-206ENST00000397852 HRCP23327 699 aa24.57■■□□□ 1.52
ITGB2-206ENST00000397852 TTBK1Q5TCY1 1321 aaPredicted RBP24.26■■□□□ 1.47
ITGB2-206ENST00000397852 DCAF1Q9Y4B6 1507 aa24.17■■□□□ 1.46
ITGB2-206ENST00000397852 SCAF1Q9H7N4 1312 aaKnown RBP23.91■■□□□ 1.42
ITGB2-206ENST00000397852 CHIC1Q5VXU3 224 aa23.84■■□□□ 1.41
ITGB2-206ENST00000397852 PPARGC1BQ86YN6 1023 aaKnown RBP23.81■■□□□ 1.4
ITGB2-206ENST00000397852 MYO15BQ96JP2 1530 aa23.77■■□□□ 1.4
ITGB2-206ENST00000397852 SCRIBQ14160 1630 aa23.64■■□□□ 1.37
ITGB2-206ENST00000397852 ABCC9O60706 1549 aa23.54■■□□□ 1.36
ITGB2-206ENST00000397852 PRKCSHP14314 528 aaPredicted RBP23.45■■□□□ 1.34
ITGB2-206ENST00000397852 RSF1Q96T23 1441 aaPredicted RBP23.33■■□□□ 1.32
ITGB2-206ENST00000397852 BCL11AQ9H165 835 aa23.3■■□□□ 1.32
ITGB2-206ENST00000397852 PCGF6Q9BYE7 350 aa23.3■■□□□ 1.32
ITGB2-206ENST00000397852 NACADO15069 1562 aa23.26■■□□□ 1.31
ITGB2-206ENST00000397852 LOC105371045A0A1W2PR82 267 aa23.18■■□□□ 1.3
ITGB2-206ENST00000397852 RB1CC1Q8TDY2 1594 aa23.12■■□□□ 1.29
ITGB2-206ENST00000397852 CECR2Q9BXF3 1484 aa23.08■■□□□ 1.29
ITGB2-206ENST00000397852 ERICH6Q7L0X2 663 aa23.07■■□□□ 1.28
ITGB2-206ENST00000397852 FAM9AQ8IZU1 332 aaPredicted RBP23.02■■□□□ 1.28
ITGB2-206ENST00000397852 ACIN1Q9UKV3 1341 aaKnown RBP22.99■■□□□ 1.27
ITGB2-206ENST00000397852 MROH2BQ7Z745 1585 aa22.98■■□□□ 1.27
ITGB2-206ENST00000397852 CENPBP07199 599 aaPredicted RBP22.97■■□□□ 1.27
ITGB2-206ENST00000397852 TRIM41Q8WV44 630 aa22.9■■□□□ 1.26
ITGB2-206ENST00000397852 WIZO95785 1651 aa22.88■■□□□ 1.25
ITGB2-206ENST00000397852 APLP2Q06481 763 aa22.86■■□□□ 1.25
ITGB2-206ENST00000397852 GTF3C3Q9Y5Q9 886 aa22.81■■□□□ 1.24
ITGB2-206ENST00000397852 NEUROD1Q13562 356 aa22.77■■□□□ 1.24
ITGB2-206ENST00000397852 ZEB1P37275 1124 aaPredicted RBP22.74■■□□□ 1.23
ITGB2-206ENST00000397852 BAZ1AQ9NRL2 1556 aaPredicted RBP22.68■■□□□ 1.22
ITGB2-206ENST00000397852 EHMT2Q96KQ7 1210 aa22.65■■□□□ 1.22
ITGB2-206ENST00000397852 UNC13AQ9UPW8 1703 aa22.65■■□□□ 1.22
ITGB2-206ENST00000397852 TRIM26Q12899 539 aaPredicted RBP22.55■■□□□ 1.2
ITGB2-206ENST00000397852 SMARCA4P51532 1647 aa22.53■■□□□ 1.2
ITGB2-206ENST00000397852 EIF4G1Q04637 1599 aaKnown RBP22.48■■□□□ 1.19
ITGB2-206ENST00000397852 TOP2AP11388 1531 aaKnown RBP22.47■■□□□ 1.19
ITGB2-206ENST00000397852 ANP32EQ9BTT0 268 aa22.46■■□□□ 1.19
ITGB2-206ENST00000397852 PABPN1Q86U42 306 aaKnown RBP eCLIP22.43■■□□□ 1.18
ITGB2-206ENST00000397852 CCDC88BA6NC98 1476 aa22.39■■□□□ 1.17
ITGB2-206ENST00000397852 SMARCA2P51531 1590 aa22.36■■□□□ 1.17
ITGB2-206ENST00000397852 ABCC8Q09428 1581 aa22.34■■□□□ 1.17
ITGB2-206ENST00000397852 BICRAQ9NZM4 1560 aa22.33■■□□□ 1.17
ITGB2-206ENST00000397852 CSRNP3Q8WYN3 585 aa22.17■■□□□ 1.14
ITGB2-206ENST00000397852 SOGA1O94964 1423 aa22.08■■□□□ 1.13
ITGB2-206ENST00000397852 SLC24A1O60721 1099 aa22.06■■□□□ 1.12
ITGB2-206ENST00000397852 PEG3Q9GZU2 1588 aa22.05■■□□□ 1.12
ITGB2-206ENST00000397852 RUSC2Q8N2Y8 1516 aa22■■□□□ 1.11
ITGB2-206ENST00000397852 ATAD2BQ9ULI0 1458 aa21.96■■□□□ 1.11
ITGB2-206ENST00000397852 WRNQ14191 1432 aaPredicted RBP eCLIP21.92■■□□□ 1.1
ITGB2-206ENST00000397852 BAZ1BQ9UIG0 1483 aaKnown RBP21.92■■□□□ 1.1
ITGB2-206ENST00000397852 CEP162Q5TB80 1403 aa21.91■■□□□ 1.1
ITGB2-206ENST00000397852 EEA1Q15075 1411 aa21.87■■□□□ 1.09
ITGB2-206ENST00000397852 SYNJ1O43426 1573 aa21.86■■□□□ 1.09
ITGB2-206ENST00000397852 UBTFP17480 764 aaKnown RBP21.85■■□□□ 1.09
ITGB2-206ENST00000397852 TNIKQ9UKE5 1360 aa21.85■■□□□ 1.09
ITGB2-206ENST00000397852 DIEXFQ68CQ4 756 aaKnown RBP21.85■■□□□ 1.09
ITGB2-206ENST00000397852 GOLGA3Q08378 1498 aa21.77■■□□□ 1.08
ITGB2-206ENST00000397852 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.74■■□□□ 1.07
ITGB2-206ENST00000397852 TSHZ2Q9NRE2 1034 aa21.69■■□□□ 1.06
ITGB2-206ENST00000397852 CCER1Q8TC90 406 aaPredicted RBP21.65■■□□□ 1.06
ITGB2-206ENST00000397852 CEP164Q9UPV0 1460 aa21.65■■□□□ 1.06
ITGB2-206ENST00000397852 ANO8Q9HCE9 1232 aaPredicted RBP21.64■■□□□ 1.05
ITGB2-206ENST00000397852 KIF21BO75037 1637 aa21.62■■□□□ 1.05
ITGB2-206ENST00000397852 EIF5BO60841 1220 aaKnown RBP21.56■■□□□ 1.04
ITGB2-206ENST00000397852 TOP2BQ02880 1626 aa21.56■■□□□ 1.04
ITGB2-206ENST00000397852 UBE2Q2Q8WVN8 375 aa21.56■■□□□ 1.04
ITGB2-206ENST00000397852 YTHDC1Q96MU7 727 aaKnown RBP21.54■■□□□ 1.04
ITGB2-206ENST00000397852 RAPGEF2Q9Y4G8 1499 aa21.54■■□□□ 1.04
ITGB2-206ENST00000397852 CLSPNQ9HAW4 1339 aa21.53■■□□□ 1.04
ITGB2-206ENST00000397852 RANGAP1P46060 587 aaPredicted RBP21.53■■□□□ 1.04
ITGB2-206ENST00000397852 CLIP1P30622 1438 aa21.53■■□□□ 1.04
ITGB2-206ENST00000397852 HMGXB3Q12766 1538 aa21.52■■□□□ 1.04
ITGB2-206ENST00000397852 NCAPD3P42695 1498 aa21.52■■□□□ 1.04
ITGB2-206ENST00000397852 BIVM-ERCC5R4GMW8 1640 aa21.49■■□□□ 1.03
ITGB2-206ENST00000397852 DAXXQ9UER7 740 aaPredicted RBP21.48■■□□□ 1.03
ITGB2-206ENST00000397852 SUPT16HQ9Y5B9 1047 aaKnown RBP21.42■■□□□ 1.02
ITGB2-206ENST00000397852 CUX1P39880 1505 aa21.4■■□□□ 1.02
ITGB2-206ENST00000397852 VPS8Q8N3P4 1428 aa21.4■■□□□ 1.02
ITGB2-206ENST00000397852 CFTRP13569 1480 aa21.33■■□□□ 1.01
ITGB2-206ENST00000397852 HNRNPUL2Q1KMD3 747 aaKnown RBP21.33■■□□□ 1
ITGB2-206ENST00000397852 PRXQ9BXM0 1461 aa21.3■■□□□ 1
ITGB2-206ENST00000397852 ERICH3Q5RHP9 1530 aa21.28■■□□□ 1
ITGB2-206ENST00000397852 MYT1LQ9UL68 1186 aa21.25■□□□□ 0.99
ITGB2-206ENST00000397852 KIF27Q86VH2 1401 aa21.24■□□□□ 0.99
ITGB2-206ENST00000397852 SALL2Q9Y467 1007 aaPredicted RBP21.24■□□□□ 0.99
ITGB2-206ENST00000397852 ARAP1Q96P48 1450 aa21.21■□□□□ 0.99
ITGB2-206ENST00000397852 ERICH6BQ5W0A0 696 aa21.2■□□□□ 0.98
ITGB2-206ENST00000397852 PRDM2Q13029 1718 aa21.19■□□□□ 0.98
ITGB2-206ENST00000397852 ZNF316A6NFI3 1004 aaPredicted RBP21.13■□□□□ 0.97
ITGB2-206ENST00000397852 CADPSQ9ULU8 1353 aa21.12■□□□□ 0.97
ITGB2-206ENST00000397852 MIER1Q8N108 512 aa21.11■□□□□ 0.97
ITGB2-206ENST00000397852 CCDC136Q96JN2 1154 aa21.11■□□□□ 0.97
ITGB2-206ENST00000397852 CC2D2AQ9P2K1 1620 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms