RNA–Protein interactions for RNA: ENST00000295872.8

SPICE1-201, Transcript of spindle and centriole associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPICE1, Length 5,417 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPICE1-201ENST00000295872 DCAF8L2P0C7V8 631 aa23.93■■□□□ 1.42
SPICE1-201ENST00000295872 NISCHQ9Y2I1 1504 aa23.87■■□□□ 1.41
SPICE1-201ENST00000295872 SUPT5HO00267 1087 aaKnown RBP22.14■■□□□ 1.14
SPICE1-201ENST00000295872 SHROOM4Q9ULL8 1493 aa22.13■■□□□ 1.13
SPICE1-201ENST00000295872 EHMT2Q96KQ7 1210 aa21.17■□□□□ 0.98
SPICE1-201ENST00000295872 FAM9AQ8IZU1 332 aaPredicted RBP20.94■□□□□ 0.94
SPICE1-201ENST00000295872 ABCC9O60706 1549 aa20.91■□□□□ 0.94
SPICE1-201ENST00000295872 APLP2Q06481 763 aa20.83■□□□□ 0.92
SPICE1-201ENST00000295872 TRIM41Q8WV44 630 aa20.64■□□□□ 0.89
SPICE1-201ENST00000295872 RANGAP1P46060 587 aaPredicted RBP20.53■□□□□ 0.88
SPICE1-201ENST00000295872 PABPN1Q86U42 306 aaKnown RBP eCLIP20.53■□□□□ 0.88
SPICE1-201ENST00000295872 ATP1B4Q9UN42 357 aaPredicted RBP20.39■□□□□ 0.86
SPICE1-201ENST00000295872 PCGF6Q9BYE7 350 aa20.36■□□□□ 0.85
SPICE1-201ENST00000295872 UBTFP17480 764 aaKnown RBP20.35■□□□□ 0.85
SPICE1-201ENST00000295872 TTBK1Q5TCY1 1321 aaPredicted RBP20.32■□□□□ 0.84
SPICE1-201ENST00000295872 ZEB1P37275 1124 aaPredicted RBP20.15■□□□□ 0.82
SPICE1-201ENST00000295872 PELP1Q8IZL8 1130 aaKnown RBP20.03■□□□□ 0.8
SPICE1-201ENST00000295872 CHIC1Q5VXU3 224 aa19.99■□□□□ 0.79
SPICE1-201ENST00000295872 CCER1Q8TC90 406 aaPredicted RBP19.98■□□□□ 0.79
SPICE1-201ENST00000295872 CCDC180Q9P1Z9 1646 aa19.92■□□□□ 0.78
SPICE1-201ENST00000295872 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.91■□□□□ 0.78
SPICE1-201ENST00000295872 HNRNPUL2Q1KMD3 747 aaKnown RBP19.91■□□□□ 0.78
SPICE1-201ENST00000295872 TRIM26Q12899 539 aaPredicted RBP19.81■□□□□ 0.76
SPICE1-201ENST00000295872 MYT1LQ9UL68 1186 aa19.78■□□□□ 0.76
SPICE1-201ENST00000295872 SCRIBQ14160 1630 aa19.77■□□□□ 0.76
SPICE1-201ENST00000295872 ZCCHC6Q5VYS8 1495 aaKnown RBP19.72■□□□□ 0.75
SPICE1-201ENST00000295872 LOC105371045A0A1W2PR82 267 aa19.71■□□□□ 0.75
SPICE1-201ENST00000295872 CENPBP07199 599 aaPredicted RBP19.68■□□□□ 0.74
SPICE1-201ENST00000295872 PPARGC1BQ86YN6 1023 aaKnown RBP19.67■□□□□ 0.74
SPICE1-201ENST00000295872 FBLN2P98095 1184 aa19.62■□□□□ 0.73
SPICE1-201ENST00000295872 RB1CC1Q8TDY2 1594 aa19.62■□□□□ 0.73
SPICE1-201ENST00000295872 ITGAEP38570 1179 aa19.49■□□□□ 0.71
SPICE1-201ENST00000295872 HRCP23327 699 aa19.47■□□□□ 0.71
SPICE1-201ENST00000295872 NACADO15069 1562 aa19.4■□□□□ 0.7
SPICE1-201ENST00000295872 NEFLP07196 543 aa19.2■□□□□ 0.66
SPICE1-201ENST00000295872 YTHDC1Q96MU7 727 aaKnown RBP19.19■□□□□ 0.66
SPICE1-201ENST00000295872 FAM50AQ14320 339 aaKnown RBP19.17■□□□□ 0.66
SPICE1-201ENST00000295872 CSRNP3Q8WYN3 585 aa19.15■□□□□ 0.66
SPICE1-201ENST00000295872 P3H3Q8IVL6 736 aa19.12■□□□□ 0.65
SPICE1-201ENST00000295872 ARID3CA6NKF2 412 aa19.06■□□□□ 0.64
SPICE1-201ENST00000295872 POLR3GLQ9BT43 218 aa19.02■□□□□ 0.64
SPICE1-201ENST00000295872 ERICH6Q7L0X2 663 aa19.02■□□□□ 0.64
SPICE1-201ENST00000295872 NPM1P06748 294 aaKnown RBP eCLIP19.01■□□□□ 0.63
SPICE1-201ENST00000295872 TRIM52Q96A61 297 aa19■□□□□ 0.63
SPICE1-201ENST00000295872 BAZ1BQ9UIG0 1483 aaKnown RBP18.99■□□□□ 0.63
SPICE1-201ENST00000295872 CDK11AQ9UQ88 783 aaPredicted RBP18.98■□□□□ 0.63
SPICE1-201ENST00000295872 DCAF1Q9Y4B6 1507 aa18.95■□□□□ 0.62
SPICE1-201ENST00000295872 CHMP7Q8WUX9 453 aaPredicted RBP18.95■□□□□ 0.62
SPICE1-201ENST00000295872 RSF1Q96T23 1441 aaPredicted RBP18.9■□□□□ 0.62
SPICE1-201ENST00000295872 ERCC6Q03468 1493 aa18.87■□□□□ 0.61
SPICE1-201ENST00000295872 ZNF777Q9ULD5 760 aaPredicted RBP18.86■□□□□ 0.61
SPICE1-201ENST00000295872 DIEXFQ68CQ4 756 aaKnown RBP18.85■□□□□ 0.61
SPICE1-201ENST00000295872 SLC4A1APQ9BWU0 796 aaKnown RBP18.84■□□□□ 0.61
SPICE1-201ENST00000295872 BAZ1AQ9NRL2 1556 aaPredicted RBP18.81■□□□□ 0.6
SPICE1-201ENST00000295872 ESF1Q9H501 851 aaKnown RBP18.77■□□□□ 0.59
SPICE1-201ENST00000295872 NEUROD1Q13562 356 aa18.74■□□□□ 0.59
SPICE1-201ENST00000295872 CNGB1Q14028 1251 aaPredicted RBP18.73■□□□□ 0.59
SPICE1-201ENST00000295872 CECR2Q9BXF3 1484 aa18.7■□□□□ 0.58
SPICE1-201ENST00000295872 BCANQ96GW7 911 aa18.69■□□□□ 0.58
SPICE1-201ENST00000295872 ZNF326Q5BKZ1 582 aaKnown RBP18.66■□□□□ 0.58
SPICE1-201ENST00000295872 WRNQ14191 1432 aaPredicted RBP eCLIP18.64■□□□□ 0.57
SPICE1-201ENST00000295872 EEA1Q15075 1411 aa18.62■□□□□ 0.57
SPICE1-201ENST00000295872 ZNF316A6NFI3 1004 aaPredicted RBP18.6■□□□□ 0.57
SPICE1-201ENST00000295872 MYO15BQ96JP2 1530 aa18.57■□□□□ 0.56
SPICE1-201ENST00000295872 PLPPR3Q6T4P5 718 aa18.56■□□□□ 0.56
SPICE1-201ENST00000295872 SMARCA2P51531 1590 aa18.54■□□□□ 0.56
SPICE1-201ENST00000295872 KIF27Q86VH2 1401 aa18.54■□□□□ 0.56
SPICE1-201ENST00000295872 ANP32CO43423 234 aa18.52■□□□□ 0.55
SPICE1-201ENST00000295872 STAG3Q9UJ98 1225 aa18.52■□□□□ 0.55
SPICE1-201ENST00000295872 PDS5BQ9NTI5 1447 aa18.49■□□□□ 0.55
SPICE1-201ENST00000295872 MTUS2Q5JR59 1369 aa18.49■□□□□ 0.55
SPICE1-201ENST00000295872 CLIP1P30622 1438 aa18.49■□□□□ 0.55
SPICE1-201ENST00000295872 KCNH8Q96L42 1107 aa18.48■□□□□ 0.55
SPICE1-201ENST00000295872 GOLGA3Q08378 1498 aa18.48■□□□□ 0.55
SPICE1-201ENST00000295872 TSPY4P0CV99 314 aa18.47■□□□□ 0.55
SPICE1-201ENST00000295872 TSPY10P0CW01 314 aa18.47■□□□□ 0.55
SPICE1-201ENST00000295872 CHGAP10645 457 aaKnown RBP18.46■□□□□ 0.55
SPICE1-201ENST00000295872 PLEKHD1A6NEE1 506 aa18.46■□□□□ 0.55
SPICE1-201ENST00000295872 MROH2BQ7Z745 1585 aa18.44■□□□□ 0.54
SPICE1-201ENST00000295872 MYT1Q01538 1121 aa18.44■□□□□ 0.54
SPICE1-201ENST00000295872 DAXXQ9UER7 740 aaPredicted RBP18.42■□□□□ 0.54
SPICE1-201ENST00000295872 CHIC2Q9UKJ5 165 aa18.4■□□□□ 0.54
SPICE1-201ENST00000295872 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.39■□□□□ 0.536e-6■□□□□ 11
SPICE1-201ENST00000295872 CEP162Q5TB80 1403 aa18.37■□□□□ 0.53
SPICE1-201ENST00000295872 CEP164Q9UPV0 1460 aa18.34■□□□□ 0.53
SPICE1-201ENST00000295872 TONSLQ96HA7 1378 aa18.34■□□□□ 0.53
SPICE1-201ENST00000295872 TNIKQ9UKE5 1360 aa18.33■□□□□ 0.53
SPICE1-201ENST00000295872 CCDC88BA6NC98 1476 aa18.32■□□□□ 0.52
SPICE1-201ENST00000295872 CUX2O14529 1486 aa18.32■□□□□ 0.52
SPICE1-201ENST00000295872 CADPSQ9ULU8 1353 aa18.28■□□□□ 0.52
SPICE1-201ENST00000295872 CARMIL1Q5VZK9 1371 aa18.26■□□□□ 0.51
SPICE1-201ENST00000295872 ATAD2BQ9ULI0 1458 aa18.25■□□□□ 0.51
SPICE1-201ENST00000295872 TRHP20396 242 aaPredicted RBP18.25■□□□□ 0.51
SPICE1-201ENST00000295872 GTF3C3Q9Y5Q9 886 aa18.23■□□□□ 0.51
SPICE1-201ENST00000295872 ARID4BQ4LE39 1312 aaPredicted RBP18.23■□□□□ 0.51
SPICE1-201ENST00000295872 SOGA1O94964 1423 aa18.23■□□□□ 0.51
SPICE1-201ENST00000295872 CFDP1Q9UEE9 299 aaPredicted RBP18.21■□□□□ 0.51
SPICE1-201ENST00000295872 EIF4G1Q04637 1599 aaKnown RBP18.2■□□□□ 0.5
SPICE1-201ENST00000295872 TDRD9Q8NDG6 1382 aaKnown RBP18.19■□□□□ 0.5
SPICE1-201ENST00000295872 TOP2AP11388 1531 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms