RNA–Protein interactions for RNA: ENST00000582856.2

RN7SL556P-201, Transcript of RNA, 7SL, cytoplasmic 556, pseudogene, humanhuman

BASIC

Gene RN7SL556P, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL556P-201ENST00000582856 NISCHQ9Y2I1 1504 aa33.3■■■□□ 2.92
RN7SL556P-201ENST00000582856 CCDC180Q9P1Z9 1646 aa29.6■■■□□ 2.33
RN7SL556P-201ENST00000582856 ABCC9O60706 1549 aa28.76■■■□□ 2.19
RN7SL556P-201ENST00000582856 ZCCHC6Q5VYS8 1495 aaKnown RBP27.79■■■□□ 2.04
RN7SL556P-201ENST00000582856 NACADO15069 1562 aa27.73■■■□□ 2.03
RN7SL556P-201ENST00000582856 RB1CC1Q8TDY2 1594 aa27.73■■■□□ 2.03
RN7SL556P-201ENST00000582856 DCAF8L2P0C7V8 631 aa27.63■■■□□ 2.01
RN7SL556P-201ENST00000582856 MYO15BQ96JP2 1530 aa27.62■■■□□ 2.01
RN7SL556P-201ENST00000582856 DCAF1Q9Y4B6 1507 aa27.57■■■□□ 2
RN7SL556P-201ENST00000582856 UNC13AQ9UPW8 1703 aa27.24■■□□□ 1.95
RN7SL556P-201ENST00000582856 SCRIBQ14160 1630 aa26.99■■□□□ 1.91
RN7SL556P-201ENST00000582856 BICRAQ9NZM4 1560 aa26.97■■□□□ 1.91
RN7SL556P-201ENST00000582856 PABPN1Q86U42 306 aaKnown RBP eCLIP26.85■■□□□ 1.89
RN7SL556P-201ENST00000582856 SHROOM4Q9ULL8 1493 aa26.61■■□□□ 1.85
RN7SL556P-201ENST00000582856 DNAJC5BQ9UF47 199 aa26.28■■□□□ 1.8
RN7SL556P-201ENST00000582856 EIF4G1Q04637 1599 aaKnown RBP26.2■■□□□ 1.78
RN7SL556P-201ENST00000582856 CC2D2AQ9P2K1 1620 aa26.06■■□□□ 1.76
RN7SL556P-201ENST00000582856 CECR2Q9BXF3 1484 aa25.94■■□□□ 1.74
RN7SL556P-201ENST00000582856 SMARCA4P51532 1647 aa25.85■■□□□ 1.73
RN7SL556P-201ENST00000582856 BAZ1AQ9NRL2 1556 aaPredicted RBP25.78■■□□□ 1.72
RN7SL556P-201ENST00000582856 MROH2BQ7Z745 1585 aa25.69■■□□□ 1.7
RN7SL556P-201ENST00000582856 ATAD2BQ9ULI0 1458 aa25.62■■□□□ 1.69
RN7SL556P-201ENST00000582856 SMARCA2P51531 1590 aa25.59■■□□□ 1.69
RN7SL556P-201ENST00000582856 PEG3Q9GZU2 1588 aa25.59■■□□□ 1.69
RN7SL556P-201ENST00000582856 NCAPD3P42695 1498 aa25.58■■□□□ 1.69
RN7SL556P-201ENST00000582856 HMGXB3Q12766 1538 aa25.49■■□□□ 1.67
RN7SL556P-201ENST00000582856 WIZO95785 1651 aa25.45■■□□□ 1.66
RN7SL556P-201ENST00000582856 RSF1Q96T23 1441 aaPredicted RBP25.4■■□□□ 1.66
RN7SL556P-201ENST00000582856 BAZ1BQ9UIG0 1483 aaKnown RBP25.4■■□□□ 1.66
RN7SL556P-201ENST00000582856 TOP2AP11388 1531 aaKnown RBP25.15■■□□□ 1.62
RN7SL556P-201ENST00000582856 NESP48681 1621 aa24.96■■□□□ 1.59
RN7SL556P-201ENST00000582856 LAMC3Q9Y6N6 1575 aa24.9■■□□□ 1.58
RN7SL556P-201ENST00000582856 CCDC88BA6NC98 1476 aa24.83■■□□□ 1.57
RN7SL556P-201ENST00000582856 CADPSQ9ULU8 1353 aa24.8■■□□□ 1.56
RN7SL556P-201ENST00000582856 SUPT5HO00267 1087 aaKnown RBP24.79■■□□□ 1.56
RN7SL556P-201ENST00000582856 CFTRP13569 1480 aa24.73■■□□□ 1.55
RN7SL556P-201ENST00000582856 ERCC6Q03468 1493 aa24.73■■□□□ 1.55
RN7SL556P-201ENST00000582856 KIF21AQ7Z4S6 1674 aa24.72■■□□□ 1.55
RN7SL556P-201ENST00000582856 PRDM2Q13029 1718 aa24.66■■□□□ 1.54
RN7SL556P-201ENST00000582856 PDS5BQ9NTI5 1447 aa24.66■■□□□ 1.54
RN7SL556P-201ENST00000582856 THOC2Q8NI27 1593 aaKnown RBP24.59■■□□□ 1.53
RN7SL556P-201ENST00000582856 FANCD2Q9BXW9 1451 aa24.55■■□□□ 1.52
RN7SL556P-201ENST00000582856 CEP164Q9UPV0 1460 aa24.51■■□□□ 1.51
RN7SL556P-201ENST00000582856 CUX2O14529 1486 aa24.45■■□□□ 1.51
RN7SL556P-201ENST00000582856 MRC2Q9UBG0 1479 aa24.45■■□□□ 1.5
RN7SL556P-201ENST00000582856 WDR62O43379 1518 aa24.4■■□□□ 1.5
RN7SL556P-201ENST00000582856 URB2Q14146 1524 aaKnown RBP24.34■■□□□ 1.49
RN7SL556P-201ENST00000582856 TOPBP1Q92547 1522 aa24.2■■□□□ 1.46
RN7SL556P-201ENST00000582856 DNMBPQ6XZF7 1577 aa24.19■■□□□ 1.46
RN7SL556P-201ENST00000582856 ABCC8Q09428 1581 aa24.15■■□□□ 1.46
RN7SL556P-201ENST00000582856 CUX1P39880 1505 aa24.09■■□□□ 1.45
RN7SL556P-201ENST00000582856 POLA1P09884 1462 aaPredicted RBP24■■□□□ 1.43
RN7SL556P-201ENST00000582856 IFT140Q96RY7 1462 aa23.98■■□□□ 1.43
RN7SL556P-201ENST00000582856 TARBP1Q13395 1621 aaKnown RBP23.97■■□□□ 1.43
RN7SL556P-201ENST00000582856 FGD5Q6ZNL6 1462 aa23.96■■□□□ 1.43
RN7SL556P-201ENST00000582856 BIVM-ERCC5R4GMW8 1640 aa23.95■■□□□ 1.42
RN7SL556P-201ENST00000582856 SYNJ1O43426 1573 aa23.94■■□□□ 1.42
RN7SL556P-201ENST00000582856 WRNQ14191 1432 aaPredicted RBP eCLIP23.93■■□□□ 1.42
RN7SL556P-201ENST00000582856 TOP2BQ02880 1626 aa23.92■■□□□ 1.42
RN7SL556P-201ENST00000582856 ZNF608Q9ULD9 1512 aaPredicted RBP23.89■■□□□ 1.42
RN7SL556P-201ENST00000582856 RAD54L2Q9Y4B4 1467 aa23.89■■□□□ 1.42
RN7SL556P-201ENST00000582856 SOGA1O94964 1423 aa23.85■■□□□ 1.41
RN7SL556P-201ENST00000582856 WDR97A6NE52 1622 aa23.85■■□□□ 1.41
RN7SL556P-201ENST00000582856 EIF4G3O43432 1585 aaKnown RBP23.84■■□□□ 1.41
RN7SL556P-201ENST00000582856 AQRO60306 1485 aaKnown RBP eCLIP23.75■■□□□ 1.39
RN7SL556P-201ENST00000582856 ABCA10Q8WWZ4 1543 aa23.73■■□□□ 1.39
RN7SL556P-201ENST00000582856 TDRD9Q8NDG6 1382 aaKnown RBP23.71■■□□□ 1.39
RN7SL556P-201ENST00000582856 ABCA5Q8WWZ7 1642 aa23.68■■□□□ 1.38
RN7SL556P-201ENST00000582856 PBRM1Q86U86 1689 aa23.64■■□□□ 1.38
RN7SL556P-201ENST00000582856 GAPVD1Q14C86 1478 aa23.6■■□□□ 1.37
RN7SL556P-201ENST00000582856 GRIN2BQ13224 1484 aa23.57■■□□□ 1.36
RN7SL556P-201ENST00000582856 CHD1O14646 1710 aa23.55■■□□□ 1.36
RN7SL556P-201ENST00000582856 SNAPC4Q5SXM2 1469 aa23.55■■□□□ 1.36
RN7SL556P-201ENST00000582856 MAGI1Q96QZ7 1491 aaPredicted RBP23.5■■□□□ 1.35
RN7SL556P-201ENST00000582856 DNAJC5Q9H3Z4 198 aa23.5■■□□□ 1.35
RN7SL556P-201ENST00000582856 ERICH3Q5RHP9 1530 aa23.45■■□□□ 1.34
RN7SL556P-201ENST00000582856 ADAMTS12P58397 1594 aa23.43■■□□□ 1.34
RN7SL556P-201ENST00000582856 SYNJ2O15056 1496 aa23.42■■□□□ 1.34
RN7SL556P-201ENST00000582856 OSCARQ8IYS5 282 aa23.39■■□□□ 1.33
RN7SL556P-201ENST00000582856 KIF27Q86VH2 1401 aa23.39■■□□□ 1.33
RN7SL556P-201ENST00000582856 TRIM41Q8WV44 630 aa23.38■■□□□ 1.33
RN7SL556P-201ENST00000582856 FBLN2P98095 1184 aa23.35■■□□□ 1.33
RN7SL556P-201ENST00000582856 CHMP7Q8WUX9 453 aaPredicted RBP23.32■■□□□ 1.32
RN7SL556P-201ENST00000582856 FHAD1B1AJZ9 1412 aa23.32■■□□□ 1.32
RN7SL556P-201ENST00000582856 RUSC2Q8N2Y8 1516 aa23.31■■□□□ 1.32
RN7SL556P-201ENST00000582856 IGF1RP08069 1367 aa23.3■■□□□ 1.32
RN7SL556P-201ENST00000582856 GRIN2AQ12879 1464 aa23.3■■□□□ 1.32
RN7SL556P-201ENST00000582856 CUL7Q14999 1698 aa23.28■■□□□ 1.32
RN7SL556P-201ENST00000582856 CLASP1Q7Z460 1538 aa23.26■■□□□ 1.31
RN7SL556P-201ENST00000582856 CHIC1Q5VXU3 224 aa23.25■■□□□ 1.31
RN7SL556P-201ENST00000582856 CEP170Q5SW79 1584 aa23.23■■□□□ 1.31
RN7SL556P-201ENST00000582856 NUP160Q12769 1436 aa23.19■■□□□ 1.3
RN7SL556P-201ENST00000582856 CARMIL1Q5VZK9 1371 aa23.14■■□□□ 1.3
RN7SL556P-201ENST00000582856 RIMBP3CA6NJZ7 1639 aa23.13■■□□□ 1.29
RN7SL556P-201ENST00000582856 RIMBP3BA6NNM3 1639 aa23.13■■□□□ 1.29
RN7SL556P-201ENST00000582856 RIMBP3Q9UFD9 1639 aa23.13■■□□□ 1.29
RN7SL556P-201ENST00000582856 ARHGEF11O15085 1522 aa23.11■■□□□ 1.29
RN7SL556P-201ENST00000582856 SHROOM2Q13796 1616 aa23.05■■□□□ 1.28
RN7SL556P-201ENST00000582856 RAPGEF2Q9Y4G8 1499 aa23.05■■□□□ 1.28
RN7SL556P-201ENST00000582856 EEA1Q15075 1411 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms