RNA–Protein interactions for RNA: ENST00000257860.8

PRPH-201, Transcript of peripherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPH, Length 3,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPH-201ENST00000257860 NISCHQ9Y2I1 1504 aa26.11■■□□□ 1.77
PRPH-201ENST00000257860 HRCP23327 699 aa24.85■■□□□ 1.57
PRPH-201ENST00000257860 PPARGC1BQ86YN6 1023 aaKnown RBP24.81■■□□□ 1.56
PRPH-201ENST00000257860 PCGF6Q9BYE7 350 aa24.65■■□□□ 1.54
PRPH-201ENST00000257860 SUPT5HO00267 1087 aaKnown RBP24.52■■□□□ 1.52
PRPH-201ENST00000257860 SHROOM4Q9ULL8 1493 aa24.44■■□□□ 1.5
PRPH-201ENST00000257860 PELP1Q8IZL8 1130 aaKnown RBP24.21■■□□□ 1.47
PRPH-201ENST00000257860 SCAF1Q9H7N4 1312 aaKnown RBP23.84■■□□□ 1.41
PRPH-201ENST00000257860 MYO15BQ96JP2 1530 aa23.81■■□□□ 1.4
PRPH-201ENST00000257860 CHIC1Q5VXU3 224 aa23.72■■□□□ 1.39
PRPH-201ENST00000257860 DCAF8L2P0C7V8 631 aa23.7■■□□□ 1.38
PRPH-201ENST00000257860 LOC105371045A0A1W2PR82 267 aa23.59■■□□□ 1.37
PRPH-201ENST00000257860 TRIM26Q12899 539 aaPredicted RBP23.35■■□□□ 1.33
PRPH-201ENST00000257860 MYT1Q01538 1121 aa23.23■■□□□ 1.31
PRPH-201ENST00000257860 EHMT2Q96KQ7 1210 aa23.19■■□□□ 1.3
PRPH-201ENST00000257860 NEUROD1Q13562 356 aa23.15■■□□□ 1.3
PRPH-201ENST00000257860 GTF3C3Q9Y5Q9 886 aa23.14■■□□□ 1.29
PRPH-201ENST00000257860 ZEB1P37275 1124 aaPredicted RBP23.12■■□□□ 1.29
PRPH-201ENST00000257860 ACIN1Q9UKV3 1341 aaKnown RBP23.08■■□□□ 1.28
PRPH-201ENST00000257860 DCAF1Q9Y4B6 1507 aa23.02■■□□□ 1.27
PRPH-201ENST00000257860 FAM9AQ8IZU1 332 aaPredicted RBP22.86■■□□□ 1.25
PRPH-201ENST00000257860 CENPBP07199 599 aaPredicted RBP22.83■■□□□ 1.25
PRPH-201ENST00000257860 YTHDC1Q96MU7 727 aaKnown RBP22.81■■□□□ 1.24
PRPH-201ENST00000257860 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.74■■□□□ 1.23
PRPH-201ENST00000257860 CCDC180Q9P1Z9 1646 aa22.7■■□□□ 1.22
PRPH-201ENST00000257860 DIEXFQ68CQ4 756 aaKnown RBP22.67■■□□□ 1.22
PRPH-201ENST00000257860 CCER1Q8TC90 406 aaPredicted RBP22.67■■□□□ 1.22
PRPH-201ENST00000257860 TTBK1Q5TCY1 1321 aaPredicted RBP22.59■■□□□ 1.21
PRPH-201ENST00000257860 TRIM41Q8WV44 630 aa22.37■■□□□ 1.17
PRPH-201ENST00000257860 BCL11AQ9H165 835 aa22.19■■□□□ 1.14
PRPH-201ENST00000257860 ZCCHC6Q5VYS8 1495 aaKnown RBP22.16■■□□□ 1.14
PRPH-201ENST00000257860 MIER1Q8N108 512 aa22.09■■□□□ 1.13
PRPH-201ENST00000257860 ZNF316A6NFI3 1004 aaPredicted RBP22.02■■□□□ 1.12
PRPH-201ENST00000257860 ANP32EQ9BTT0 268 aa21.9■■□□□ 1.1
PRPH-201ENST00000257860 CSRNP3Q8WYN3 585 aa21.85■■□□□ 1.09
PRPH-201ENST00000257860 BCANQ96GW7 911 aa21.8■■□□□ 1.08
PRPH-201ENST00000257860 SUPT16HQ9Y5B9 1047 aaKnown RBP21.76■■□□□ 1.07
PRPH-201ENST00000257860 TSHZ2Q9NRE2 1034 aa21.74■■□□□ 1.07
PRPH-201ENST00000257860 HNRNPUL2Q1KMD3 747 aaKnown RBP21.7■■□□□ 1.06
PRPH-201ENST00000257860 RANGAP1P46060 587 aaPredicted RBP21.52■■□□□ 1.04
PRPH-201ENST00000257860 PRKCSHP14314 528 aaPredicted RBP21.4■■□□□ 1.02
PRPH-201ENST00000257860 ITGAEP38570 1179 aa21.37■■□□□ 1.01
PRPH-201ENST00000257860 UBTFP17480 764 aaKnown RBP21.36■■□□□ 1.01
PRPH-201ENST00000257860 FKBP8Q14318 412 aa21.36■■□□□ 1.01
PRPH-201ENST00000257860 RSF1Q96T23 1441 aaPredicted RBP21.31■■□□□ 1
PRPH-201ENST00000257860 KCNH8Q96L42 1107 aa21.3■■□□□ 1
PRPH-201ENST00000257860 RB1CC1Q8TDY2 1594 aa21.27■■□□□ 1
PRPH-201ENST00000257860 RBM19Q9Y4C8 960 aaKnown RBP21.26■□□□□ 0.99
PRPH-201ENST00000257860 ERICH6Q7L0X2 663 aa21.25■□□□□ 0.99
PRPH-201ENST00000257860 CLSPNQ9HAW4 1339 aa21.2■□□□□ 0.98
PRPH-201ENST00000257860 NEFLP07196 543 aa21.14■□□□□ 0.98
PRPH-201ENST00000257860 CEP162Q5TB80 1403 aa21.12■□□□□ 0.97
PRPH-201ENST00000257860 SCRIBQ14160 1630 aa21.09■□□□□ 0.97
PRPH-201ENST00000257860 MSH5O43196 834 aa21.06■□□□□ 0.96
PRPH-201ENST00000257860 APLP2Q06481 763 aa21.05■□□□□ 0.96
PRPH-201ENST00000257860 TRIM52Q96A61 297 aa21.04■□□□□ 0.96
PRPH-201ENST00000257860 ABCC9O60706 1549 aa21.02■□□□□ 0.96
PRPH-201ENST00000257860 IRX6P78412 446 aaPredicted RBP20.98■□□□□ 0.95
PRPH-201ENST00000257860 ANO8Q9HCE9 1232 aaPredicted RBP20.95■□□□□ 0.94
PRPH-201ENST00000257860 DDX10Q13206 875 aaKnown RBP20.91■□□□□ 0.94
PRPH-201ENST00000257860 WRNQ14191 1432 aaPredicted RBP eCLIP20.89■□□□□ 0.93
PRPH-201ENST00000257860 NBR1Q14596 966 aa20.89■□□□□ 0.93
PRPH-201ENST00000257860 DEKP35659 375 aaKnown RBP20.88■□□□□ 0.93
PRPH-201ENST00000257860 CECR2Q9BXF3 1484 aa20.87■□□□□ 0.93
PRPH-201ENST00000257860 HIRIP3Q9BW71 556 aaPredicted RBP20.87■□□□□ 0.93
PRPH-201ENST00000257860 SOGA1O94964 1423 aa20.84■□□□□ 0.93
PRPH-201ENST00000257860 CCDC136Q96JN2 1154 aa20.82■□□□□ 0.92
PRPH-201ENST00000257860 CDK11AQ9UQ88 783 aaPredicted RBP20.78■□□□□ 0.92
PRPH-201ENST00000257860 CCDC88BA6NC98 1476 aa20.78■□□□□ 0.92
PRPH-201ENST00000257860 TNIKQ9UKE5 1360 aa20.77■□□□□ 0.92
PRPH-201ENST00000257860 RTN4Q9NQC3 1192 aaKnown RBP20.76■□□□□ 0.91
PRPH-201ENST00000257860 ABCC8Q09428 1581 aa20.74■□□□□ 0.91
PRPH-201ENST00000257860 SALL2Q9Y467 1007 aaPredicted RBP20.7■□□□□ 0.9
PRPH-201ENST00000257860 RUSC2Q8N2Y8 1516 aa20.69■□□□□ 0.9
PRPH-201ENST00000257860 DHX57Q6P158 1386 aaKnown RBP20.66■□□□□ 0.9
PRPH-201ENST00000257860 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.65■□□□□ 0.9
PRPH-201ENST00000257860 MROH2BQ7Z745 1585 aa20.6■□□□□ 0.89
PRPH-201ENST00000257860 FANCIQ9NVI1 1328 aa20.57■□□□□ 0.88
PRPH-201ENST00000257860 ANP32CO43423 234 aa20.57■□□□□ 0.88
PRPH-201ENST00000257860 HNRNPUQ00839 825 aaKnown RBP eCLIP20.55■□□□□ 0.88
PRPH-201ENST00000257860 PABPN1Q86U42 306 aaKnown RBP eCLIP20.54■□□□□ 0.88
PRPH-201ENST00000257860 CLIP1P30622 1438 aa20.53■□□□□ 0.88
PRPH-201ENST00000257860 WIZO95785 1651 aa20.5■□□□□ 0.87
PRPH-201ENST00000257860 IL27Q8NEV9 243 aa20.5■□□□□ 0.87
PRPH-201ENST00000257860 SIN3AQ96ST3 1273 aa20.5■□□□□ 0.87
PRPH-201ENST00000257860 B4GALNT3Q6L9W6 998 aa20.49■□□□□ 0.87
PRPH-201ENST00000257860 PAK3O75914 559 aaPredicted RBP20.48■□□□□ 0.87
PRPH-201ENST00000257860 RTL5Q5HYW3 569 aaPredicted RBP20.48■□□□□ 0.87
PRPH-201ENST00000257860 GOLGA3Q08378 1498 aa20.47■□□□□ 0.87
PRPH-201ENST00000257860 KANK4Q5T7N3 995 aaPredicted RBP20.45■□□□□ 0.86
PRPH-201ENST00000257860 NOP58Q9Y2X3 529 aaKnown RBP20.44■□□□□ 0.86
PRPH-201ENST00000257860 MYT1LQ9UL68 1186 aa20.43■□□□□ 0.86
PRPH-201ENST00000257860 ATP1B4Q9UN42 357 aaPredicted RBP20.4■□□□□ 0.86
PRPH-201ENST00000257860 EIF5BO60841 1220 aaKnown RBP20.39■□□□□ 0.85
PRPH-201ENST00000257860 CNGB1Q14028 1251 aaPredicted RBP20.38■□□□□ 0.85
PRPH-201ENST00000257860 VPS8Q8N3P4 1428 aa20.36■□□□□ 0.85
PRPH-201ENST00000257860 SENP3-EIF4A1A0A087X0R7 540 aa20.34■□□□□ 0.85
PRPH-201ENST00000257860 PPP1R15AO75807 674 aaPredicted RBP20.31■□□□□ 0.84
PRPH-201ENST00000257860 NPM2Q86SE8 214 aaKnown RBP20.31■□□□□ 0.84
PRPH-201ENST00000257860 PPP4R2Q9NY27 417 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms