RNA–Protein interactions for RNA: ENST00000628881.1

PFDN5-220, Transcript of prefoldin subunit 5, humanhuman

TSL 3 BASIC

Gene PFDN5, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-220ENST00000628881 NISCHQ9Y2I1 1504 aa33.17■■■□□ 2.9
PFDN5-220ENST00000628881 CCDC180Q9P1Z9 1646 aa29.49■■■□□ 2.31
PFDN5-220ENST00000628881 ABCC9O60706 1549 aa28.76■■■□□ 2.19
PFDN5-220ENST00000628881 RB1CC1Q8TDY2 1594 aa27.72■■■□□ 2.03
PFDN5-220ENST00000628881 NACADO15069 1562 aa27.7■■■□□ 2.03
PFDN5-220ENST00000628881 ZCCHC6Q5VYS8 1495 aaKnown RBP27.66■■■□□ 2.02
PFDN5-220ENST00000628881 DCAF8L2P0C7V8 631 aa27.62■■■□□ 2.01
PFDN5-220ENST00000628881 MYO15BQ96JP2 1530 aa27.57■■■□□ 2
PFDN5-220ENST00000628881 DCAF1Q9Y4B6 1507 aa27.47■■□□□ 1.99
PFDN5-220ENST00000628881 UNC13AQ9UPW8 1703 aa27.09■■□□□ 1.93
PFDN5-220ENST00000628881 SCRIBQ14160 1630 aa26.89■■□□□ 1.9
PFDN5-220ENST00000628881 BICRAQ9NZM4 1560 aa26.87■■□□□ 1.89
PFDN5-220ENST00000628881 PABPN1Q86U42 306 aaKnown RBP eCLIP26.86■■□□□ 1.89
PFDN5-220ENST00000628881 SHROOM4Q9ULL8 1493 aa26.62■■□□□ 1.85
PFDN5-220ENST00000628881 DNAJC5BQ9UF47 199 aa26.32■■□□□ 1.8
PFDN5-220ENST00000628881 EIF4G1Q04637 1599 aaKnown RBP26.16■■□□□ 1.78
PFDN5-220ENST00000628881 CC2D2AQ9P2K1 1620 aa26.03■■□□□ 1.76
PFDN5-220ENST00000628881 CECR2Q9BXF3 1484 aa25.85■■□□□ 1.73
PFDN5-220ENST00000628881 SMARCA4P51532 1647 aa25.74■■□□□ 1.71
PFDN5-220ENST00000628881 BAZ1AQ9NRL2 1556 aaPredicted RBP25.72■■□□□ 1.71
PFDN5-220ENST00000628881 ATAD2BQ9ULI0 1458 aa25.57■■□□□ 1.68
PFDN5-220ENST00000628881 SMARCA2P51531 1590 aa25.56■■□□□ 1.68
PFDN5-220ENST00000628881 NCAPD3P42695 1498 aa25.55■■□□□ 1.68
PFDN5-220ENST00000628881 MROH2BQ7Z745 1585 aa25.55■■□□□ 1.68
PFDN5-220ENST00000628881 PEG3Q9GZU2 1588 aa25.49■■□□□ 1.67
PFDN5-220ENST00000628881 HMGXB3Q12766 1538 aa25.45■■□□□ 1.66
PFDN5-220ENST00000628881 BAZ1BQ9UIG0 1483 aaKnown RBP25.37■■□□□ 1.65
PFDN5-220ENST00000628881 WIZO95785 1651 aa25.28■■□□□ 1.64
PFDN5-220ENST00000628881 RSF1Q96T23 1441 aaPredicted RBP25.28■■□□□ 1.64
PFDN5-220ENST00000628881 TOP2AP11388 1531 aaKnown RBP25.04■■□□□ 1.6
PFDN5-220ENST00000628881 NESP48681 1621 aa24.9■■□□□ 1.58
PFDN5-220ENST00000628881 LAMC3Q9Y6N6 1575 aa24.88■■□□□ 1.57
PFDN5-220ENST00000628881 CADPSQ9ULU8 1353 aa24.8■■□□□ 1.56
PFDN5-220ENST00000628881 ERCC6Q03468 1493 aa24.79■■□□□ 1.56
PFDN5-220ENST00000628881 CCDC88BA6NC98 1476 aa24.71■■□□□ 1.55
PFDN5-220ENST00000628881 PDS5BQ9NTI5 1447 aa24.69■■□□□ 1.54
PFDN5-220ENST00000628881 CFTRP13569 1480 aa24.68■■□□□ 1.54
PFDN5-220ENST00000628881 KIF21AQ7Z4S6 1674 aa24.63■■□□□ 1.53
PFDN5-220ENST00000628881 SUPT5HO00267 1087 aaKnown RBP24.63■■□□□ 1.53
PFDN5-220ENST00000628881 THOC2Q8NI27 1593 aaKnown RBP24.55■■□□□ 1.52
PFDN5-220ENST00000628881 CUX2O14529 1486 aa24.53■■□□□ 1.52
PFDN5-220ENST00000628881 PRDM2Q13029 1718 aa24.52■■□□□ 1.52
PFDN5-220ENST00000628881 FANCD2Q9BXW9 1451 aa24.52■■□□□ 1.52
PFDN5-220ENST00000628881 CEP164Q9UPV0 1460 aa24.5■■□□□ 1.51
PFDN5-220ENST00000628881 MRC2Q9UBG0 1479 aa24.45■■□□□ 1.51
PFDN5-220ENST00000628881 WDR62O43379 1518 aa24.38■■□□□ 1.49
PFDN5-220ENST00000628881 URB2Q14146 1524 aaKnown RBP24.27■■□□□ 1.48
PFDN5-220ENST00000628881 ABCC8Q09428 1581 aa24.15■■□□□ 1.46
PFDN5-220ENST00000628881 TOPBP1Q92547 1522 aa24.14■■□□□ 1.45
PFDN5-220ENST00000628881 DNMBPQ6XZF7 1577 aa24.12■■□□□ 1.45
PFDN5-220ENST00000628881 IFT140Q96RY7 1462 aa23.98■■□□□ 1.43
PFDN5-220ENST00000628881 CUX1P39880 1505 aa23.98■■□□□ 1.43
PFDN5-220ENST00000628881 POLA1P09884 1462 aaPredicted RBP23.94■■□□□ 1.42
PFDN5-220ENST00000628881 FGD5Q6ZNL6 1462 aa23.88■■□□□ 1.41
PFDN5-220ENST00000628881 TARBP1Q13395 1621 aaKnown RBP23.88■■□□□ 1.41
PFDN5-220ENST00000628881 ZNF608Q9ULD9 1512 aaPredicted RBP23.84■■□□□ 1.41
PFDN5-220ENST00000628881 WRNQ14191 1432 aaPredicted RBP eCLIP23.84■■□□□ 1.41
PFDN5-220ENST00000628881 SOGA1O94964 1423 aa23.83■■□□□ 1.4
PFDN5-220ENST00000628881 RAD54L2Q9Y4B4 1467 aa23.81■■□□□ 1.4
PFDN5-220ENST00000628881 TOP2BQ02880 1626 aa23.8■■□□□ 1.4
PFDN5-220ENST00000628881 BIVM-ERCC5R4GMW8 1640 aa23.8■■□□□ 1.4
PFDN5-220ENST00000628881 SYNJ1O43426 1573 aa23.78■■□□□ 1.4
PFDN5-220ENST00000628881 EIF4G3O43432 1585 aaKnown RBP23.78■■□□□ 1.4
PFDN5-220ENST00000628881 WDR97A6NE52 1622 aa23.73■■□□□ 1.39
PFDN5-220ENST00000628881 AQRO60306 1485 aaKnown RBP eCLIP23.71■■□□□ 1.396e-7■■■■■ 36.8
PFDN5-220ENST00000628881 DNAJC5Q9H3Z4 198 aa23.68■■□□□ 1.38
PFDN5-220ENST00000628881 TDRD9Q8NDG6 1382 aaKnown RBP23.67■■□□□ 1.38
PFDN5-220ENST00000628881 ABCA10Q8WWZ4 1543 aa23.67■■□□□ 1.38
PFDN5-220ENST00000628881 ABCA5Q8WWZ7 1642 aa23.58■■□□□ 1.36
PFDN5-220ENST00000628881 GAPVD1Q14C86 1478 aa23.56■■□□□ 1.36
PFDN5-220ENST00000628881 GRIN2BQ13224 1484 aa23.56■■□□□ 1.36
PFDN5-220ENST00000628881 PBRM1Q86U86 1689 aa23.53■■□□□ 1.36
PFDN5-220ENST00000628881 SNAPC4Q5SXM2 1469 aa23.52■■□□□ 1.36
PFDN5-220ENST00000628881 MAGI1Q96QZ7 1491 aaPredicted RBP23.49■■□□□ 1.35
PFDN5-220ENST00000628881 OSCARQ8IYS5 282 aa23.49■■□□□ 1.35
PFDN5-220ENST00000628881 CHD1O14646 1710 aa23.47■■□□□ 1.35
PFDN5-220ENST00000628881 SYNJ2O15056 1496 aa23.4■■□□□ 1.34
PFDN5-220ENST00000628881 ERICH3Q5RHP9 1530 aa23.39■■□□□ 1.34
PFDN5-220ENST00000628881 FBLN2P98095 1184 aa23.39■■□□□ 1.33
PFDN5-220ENST00000628881 CHMP7Q8WUX9 453 aaPredicted RBP23.36■■□□□ 1.33
PFDN5-220ENST00000628881 ADAMTS12P58397 1594 aa23.35■■□□□ 1.33
PFDN5-220ENST00000628881 KIF27Q86VH2 1401 aa23.34■■□□□ 1.33
PFDN5-220ENST00000628881 FHAD1B1AJZ9 1412 aa23.3■■□□□ 1.32
PFDN5-220ENST00000628881 TRIM41Q8WV44 630 aa23.28■■□□□ 1.32
PFDN5-220ENST00000628881 GRIN2AQ12879 1464 aa23.26■■□□□ 1.31
PFDN5-220ENST00000628881 IGF1RP08069 1367 aa23.22■■□□□ 1.31
PFDN5-220ENST00000628881 CLASP1Q7Z460 1538 aa23.22■■□□□ 1.31
PFDN5-220ENST00000628881 CUL7Q14999 1698 aa23.19■■□□□ 1.3
PFDN5-220ENST00000628881 NUP160Q12769 1436 aa23.16■■□□□ 1.3
PFDN5-220ENST00000628881 CEP170Q5SW79 1584 aa23.14■■□□□ 1.29
PFDN5-220ENST00000628881 ARHGEF11O15085 1522 aa23.13■■□□□ 1.29
PFDN5-220ENST00000628881 RIMBP3CA6NJZ7 1639 aa23.13■■□□□ 1.29
PFDN5-220ENST00000628881 RIMBP3BA6NNM3 1639 aa23.13■■□□□ 1.29
PFDN5-220ENST00000628881 RIMBP3Q9UFD9 1639 aa23.13■■□□□ 1.29
PFDN5-220ENST00000628881 RUSC2Q8N2Y8 1516 aa23.12■■□□□ 1.29
PFDN5-220ENST00000628881 CARMIL1Q5VZK9 1371 aa23.09■■□□□ 1.29
PFDN5-220ENST00000628881 CHIC1Q5VXU3 224 aa23.03■■□□□ 1.28
PFDN5-220ENST00000628881 SHROOM2Q13796 1616 aa22.98■■□□□ 1.27
PFDN5-220ENST00000628881 RAPGEF2Q9Y4G8 1499 aa22.97■■□□□ 1.27
PFDN5-220ENST00000628881 ARAP1Q96P48 1450 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms