RNA–Protein interactions for RNA: ENST00000419314.5

CCT6P3-201, Transcript of chaperonin containing TCP1 subunit 6 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CCT6P3, Length 3,702 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6P3-201ENST00000419314 NISCHQ9Y2I1 1504 aa28.61■■■□□ 2.17
CCT6P3-201ENST00000419314 DCAF8L2P0C7V8 631 aa25.26■■□□□ 1.63
CCT6P3-201ENST00000419314 SHROOM4Q9ULL8 1493 aa24.96■■□□□ 1.59
CCT6P3-201ENST00000419314 SUPT5HO00267 1087 aaKnown RBP24.46■■□□□ 1.51
CCT6P3-201ENST00000419314 CCDC180Q9P1Z9 1646 aa24.14■■□□□ 1.45
CCT6P3-201ENST00000419314 ZCCHC6Q5VYS8 1495 aaKnown RBP23.98■■□□□ 1.43
CCT6P3-201ENST00000419314 ABCC9O60706 1549 aa23.63■■□□□ 1.37
CCT6P3-201ENST00000419314 DCAF1Q9Y4B6 1507 aa23.14■■□□□ 1.3
CCT6P3-201ENST00000419314 SCRIBQ14160 1630 aa23.11■■□□□ 1.29
CCT6P3-201ENST00000419314 CHIC1Q5VXU3 224 aa23.06■■□□□ 1.28
CCT6P3-201ENST00000419314 EHMT2Q96KQ7 1210 aa22.83■■□□□ 1.24
CCT6P3-201ENST00000419314 PABPN1Q86U42 306 aaKnown RBP eCLIP22.82■■□□□ 1.24
CCT6P3-201ENST00000419314 FAM9AQ8IZU1 332 aaPredicted RBP22.76■■□□□ 1.23
CCT6P3-201ENST00000419314 NACADO15069 1562 aa22.73■■□□□ 1.23
CCT6P3-201ENST00000419314 TRIM41Q8WV44 630 aa22.68■■□□□ 1.22
CCT6P3-201ENST00000419314 RSF1Q96T23 1441 aaPredicted RBP22.62■■□□□ 1.21
CCT6P3-201ENST00000419314 LOC105371045A0A1W2PR82 267 aa22.61■■□□□ 1.21
CCT6P3-201ENST00000419314 MYO15BQ96JP2 1530 aa22.59■■□□□ 1.21
CCT6P3-201ENST00000419314 RB1CC1Q8TDY2 1594 aa22.58■■□□□ 1.2
CCT6P3-201ENST00000419314 CECR2Q9BXF3 1484 aa22.52■■□□□ 1.2
CCT6P3-201ENST00000419314 PCGF6Q9BYE7 350 aa22.3■■□□□ 1.16
CCT6P3-201ENST00000419314 MROH2BQ7Z745 1585 aa22.29■■□□□ 1.16
CCT6P3-201ENST00000419314 WIZO95785 1651 aa22.07■■□□□ 1.12
CCT6P3-201ENST00000419314 BAZ1AQ9NRL2 1556 aaPredicted RBP22.06■■□□□ 1.12
CCT6P3-201ENST00000419314 PPARGC1BQ86YN6 1023 aaKnown RBP21.95■■□□□ 1.1
CCT6P3-201ENST00000419314 TTBK1Q5TCY1 1321 aaPredicted RBP21.92■■□□□ 1.1
CCT6P3-201ENST00000419314 UBTFP17480 764 aaKnown RBP21.87■■□□□ 1.09
CCT6P3-201ENST00000419314 RANGAP1P46060 587 aaPredicted RBP21.84■■□□□ 1.09
CCT6P3-201ENST00000419314 SMARCA4P51532 1647 aa21.79■■□□□ 1.08
CCT6P3-201ENST00000419314 CCDC88BA6NC98 1476 aa21.78■■□□□ 1.08
CCT6P3-201ENST00000419314 TRIM26Q12899 539 aaPredicted RBP21.72■■□□□ 1.07
CCT6P3-201ENST00000419314 UNC13AQ9UPW8 1703 aa21.68■■□□□ 1.06
CCT6P3-201ENST00000419314 TOP2AP11388 1531 aaKnown RBP21.68■■□□□ 1.06
CCT6P3-201ENST00000419314 BICRAQ9NZM4 1560 aa21.66■■□□□ 1.06
CCT6P3-201ENST00000419314 BAZ1BQ9UIG0 1483 aaKnown RBP21.64■■□□□ 1.06
CCT6P3-201ENST00000419314 ABCC8Q09428 1581 aa21.62■■□□□ 1.05
CCT6P3-201ENST00000419314 HRCP23327 699 aa21.6■■□□□ 1.05
CCT6P3-201ENST00000419314 CSRNP3Q8WYN3 585 aa21.58■■□□□ 1.05
CCT6P3-201ENST00000419314 ATAD2BQ9ULI0 1458 aa21.54■■□□□ 1.04
CCT6P3-201ENST00000419314 SMARCA2P51531 1590 aa21.51■■□□□ 1.03
CCT6P3-201ENST00000419314 SOGA1O94964 1423 aa21.45■■□□□ 1.02
CCT6P3-201ENST00000419314 WRNQ14191 1432 aaPredicted RBP eCLIP21.45■■□□□ 1.02
CCT6P3-201ENST00000419314 APLP2Q06481 763 aa21.43■■□□□ 1.02
CCT6P3-201ENST00000419314 RUSC2Q8N2Y8 1516 aa21.28■■□□□ 1
CCT6P3-201ENST00000419314 CCER1Q8TC90 406 aaPredicted RBP21.23■□□□□ 0.99
CCT6P3-201ENST00000419314 EIF4G1Q04637 1599 aaKnown RBP21.23■□□□□ 0.99
CCT6P3-201ENST00000419314 CEP162Q5TB80 1403 aa21.17■□□□□ 0.98
CCT6P3-201ENST00000419314 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.17■□□□□ 0.98
CCT6P3-201ENST00000419314 ATP1B4Q9UN42 357 aaPredicted RBP21.15■□□□□ 0.98
CCT6P3-201ENST00000419314 EEA1Q15075 1411 aa21.15■□□□□ 0.98
CCT6P3-201ENST00000419314 NCAPD3P42695 1498 aa21.13■□□□□ 0.97
CCT6P3-201ENST00000419314 ZEB1P37275 1124 aaPredicted RBP21.11■□□□□ 0.97
CCT6P3-201ENST00000419314 PEG3Q9GZU2 1588 aa21.1■□□□□ 0.97
CCT6P3-201ENST00000419314 TNIKQ9UKE5 1360 aa21.1■□□□□ 0.97
CCT6P3-201ENST00000419314 HNRNPUL2Q1KMD3 747 aaKnown RBP21.09■□□□□ 0.97
CCT6P3-201ENST00000419314 GOLGA3Q08378 1498 aa21.08■□□□□ 0.96
CCT6P3-201ENST00000419314 SYNJ1O43426 1573 aa21■□□□□ 0.95
CCT6P3-201ENST00000419314 CLIP1P30622 1438 aa20.99■□□□□ 0.95
CCT6P3-201ENST00000419314 CEP164Q9UPV0 1460 aa20.99■□□□□ 0.95
CCT6P3-201ENST00000419314 CADPSQ9ULU8 1353 aa20.95■□□□□ 0.94
CCT6P3-201ENST00000419314 P3H3Q8IVL6 736 aa20.94■□□□□ 0.94
CCT6P3-201ENST00000419314 KIF27Q86VH2 1401 aa20.91■□□□□ 0.94
CCT6P3-201ENST00000419314 ITGAEP38570 1179 aa20.9■□□□□ 0.94
CCT6P3-201ENST00000419314 HMGXB3Q12766 1538 aa20.9■□□□□ 0.94
CCT6P3-201ENST00000419314 RAPGEF2Q9Y4G8 1499 aa20.89■□□□□ 0.93
CCT6P3-201ENST00000419314 DNAJC5BQ9UF47 199 aa20.86■□□□□ 0.93
CCT6P3-201ENST00000419314 CC2D2AQ9P2K1 1620 aa20.85■□□□□ 0.93
CCT6P3-201ENST00000419314 CFTRP13569 1480 aa20.84■□□□□ 0.93
CCT6P3-201ENST00000419314 CUX2O14529 1486 aa20.83■□□□□ 0.92
CCT6P3-201ENST00000419314 CUX1P39880 1505 aa20.74■□□□□ 0.91
CCT6P3-201ENST00000419314 NESP48681 1621 aa20.72■□□□□ 0.91
CCT6P3-201ENST00000419314 FANCD2Q9BXW9 1451 aa20.71■□□□□ 0.91
CCT6P3-201ENST00000419314 TOP2BQ02880 1626 aa20.71■□□□□ 0.91
CCT6P3-201ENST00000419314 CARMIL1Q5VZK9 1371 aa20.69■□□□□ 0.9
CCT6P3-201ENST00000419314 VPS8Q8N3P4 1428 aa20.65■□□□□ 0.9
CCT6P3-201ENST00000419314 FGD5Q6ZNL6 1462 aa20.63■□□□□ 0.89
CCT6P3-201ENST00000419314 TDRD9Q8NDG6 1382 aaKnown RBP20.61■□□□□ 0.89
CCT6P3-201ENST00000419314 IGF1RP08069 1367 aa20.6■□□□□ 0.89
CCT6P3-201ENST00000419314 KANK4Q5T7N3 995 aaPredicted RBP20.6■□□□□ 0.89
CCT6P3-201ENST00000419314 FAM50AQ14320 339 aaKnown RBP20.59■□□□□ 0.89
CCT6P3-201ENST00000419314 RAD54L2Q9Y4B4 1467 aa20.59■□□□□ 0.89
CCT6P3-201ENST00000419314 KIF21BO75037 1637 aa20.56■□□□□ 0.88
CCT6P3-201ENST00000419314 ARID3CA6NKF2 412 aa20.56■□□□□ 0.88
CCT6P3-201ENST00000419314 FBLN2P98095 1184 aa20.55■□□□□ 0.88
CCT6P3-201ENST00000419314 PDS5BQ9NTI5 1447 aa20.53■□□□□ 0.88
CCT6P3-201ENST00000419314 PRXQ9BXM0 1461 aa20.52■□□□□ 0.88
CCT6P3-201ENST00000419314 BIVM-ERCC5R4GMW8 1640 aa20.46■□□□□ 0.87
CCT6P3-201ENST00000419314 TOPBP1Q92547 1522 aa20.4■□□□□ 0.86
CCT6P3-201ENST00000419314 ARAP1Q96P48 1450 aa20.39■□□□□ 0.85
CCT6P3-201ENST00000419314 POLA1P09884 1462 aaPredicted RBP20.38■□□□□ 0.85
CCT6P3-201ENST00000419314 ERICH3Q5RHP9 1530 aa20.38■□□□□ 0.85
CCT6P3-201ENST00000419314 DIEXFQ68CQ4 756 aaKnown RBP20.35■□□□□ 0.85
CCT6P3-201ENST00000419314 FHOD3Q2V2M9 1422 aa20.32■□□□□ 0.84
CCT6P3-201ENST00000419314 ERCC6Q03468 1493 aa20.31■□□□□ 0.84
CCT6P3-201ENST00000419314 ARHGAP35Q9NRY4 1499 aa20.31■□□□□ 0.84
CCT6P3-201ENST00000419314 DNMBPQ6XZF7 1577 aa20.28■□□□□ 0.84
CCT6P3-201ENST00000419314 NEUROD1Q13562 356 aa20.26■□□□□ 0.83
CCT6P3-201ENST00000419314 CHMP7Q8WUX9 453 aaPredicted RBP20.26■□□□□ 0.83
CCT6P3-201ENST00000419314 URB2Q14146 1524 aaKnown RBP20.25■□□□□ 0.83
CCT6P3-201ENST00000419314 GAPVD1Q14C86 1478 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms