RNA–Protein interactions for RNA: ENST00000612814.4

SLC46A1-207, Transcript of solute carrier family 46 member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SLC46A1, Length 6,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-207ENST00000612814 DCAF8L2P0C7V8 631 aa22.34■■□□□ 1.17
SLC46A1-207ENST00000612814 SUPT5HO00267 1087 aaKnown RBP21.13■□□□□ 0.97
SLC46A1-207ENST00000612814 EHMT2Q96KQ7 1210 aa21■□□□□ 0.95
SLC46A1-207ENST00000612814 PELP1Q8IZL8 1130 aaKnown RBP20.9■□□□□ 0.94
SLC46A1-207ENST00000612814 SHROOM4Q9ULL8 1493 aa20.67■□□□□ 0.9
SLC46A1-207ENST00000612814 ERICH6Q7L0X2 663 aa20.28■□□□□ 0.84
SLC46A1-207ENST00000612814 TTBK1Q5TCY1 1321 aaPredicted RBP20.26■□□□□ 0.83
SLC46A1-207ENST00000612814 APLP2Q06481 763 aa20.22■□□□□ 0.83
SLC46A1-207ENST00000612814 PCGF6Q9BYE7 350 aa20.21■□□□□ 0.83
SLC46A1-207ENST00000612814 FAM9AQ8IZU1 332 aaPredicted RBP20.08■□□□□ 0.8
SLC46A1-207ENST00000612814 CENPBP07199 599 aaPredicted RBP20.05■□□□□ 0.8
SLC46A1-207ENST00000612814 CCER1Q8TC90 406 aaPredicted RBP19.95■□□□□ 0.78
SLC46A1-207ENST00000612814 RANGAP1P46060 587 aaPredicted RBP19.92■□□□□ 0.78
SLC46A1-207ENST00000612814 NISCHQ9Y2I1 1504 aa19.82■□□□□ 0.76
SLC46A1-207ENST00000612814 YTHDC1Q96MU7 727 aaKnown RBP19.82■□□□□ 0.76
SLC46A1-207ENST00000612814 ZEB1P37275 1124 aaPredicted RBP19.69■□□□□ 0.74
SLC46A1-207ENST00000612814 MYT1Q01538 1121 aa19.69■□□□□ 0.74
SLC46A1-207ENST00000612814 NEFLP07196 543 aa19.64■□□□□ 0.73
SLC46A1-207ENST00000612814 ATP1B4Q9UN42 357 aaPredicted RBP19.59■□□□□ 0.73
SLC46A1-207ENST00000612814 TRIM41Q8WV44 630 aa19.38■□□□□ 0.69
SLC46A1-207ENST00000612814 PPARGC1BQ86YN6 1023 aaKnown RBP19.37■□□□□ 0.69
SLC46A1-207ENST00000612814 UBTFP17480 764 aaKnown RBP19.28■□□□□ 0.68
SLC46A1-207ENST00000612814 DAXXQ9UER7 740 aaPredicted RBP19.2■□□□□ 0.66
SLC46A1-207ENST00000612814 HRCP23327 699 aa19.09■□□□□ 0.65
SLC46A1-207ENST00000612814 POLR3GLQ9BT43 218 aa19.06■□□□□ 0.64
SLC46A1-207ENST00000612814 CNGB1Q14028 1251 aaPredicted RBP19.03■□□□□ 0.64
SLC46A1-207ENST00000612814 TRIM26Q12899 539 aaPredicted RBP19.01■□□□□ 0.63
SLC46A1-207ENST00000612814 ITGAEP38570 1179 aa18.96■□□□□ 0.63
SLC46A1-207ENST00000612814 MYT1LQ9UL68 1186 aa18.94■□□□□ 0.62
SLC46A1-207ENST00000612814 RTL5Q5HYW3 569 aaPredicted RBP18.85■□□□□ 0.61
SLC46A1-207ENST00000612814 CHIC1Q5VXU3 224 aa18.83■□□□□ 0.61
SLC46A1-207ENST00000612814 HNRNPUL2Q1KMD3 747 aaKnown RBP18.79■□□□□ 0.6
SLC46A1-207ENST00000612814 ZNF316A6NFI3 1004 aaPredicted RBP18.78■□□□□ 0.6
SLC46A1-207ENST00000612814 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.75■□□□□ 0.59
SLC46A1-207ENST00000612814 LOC105371045A0A1W2PR82 267 aa18.74■□□□□ 0.59
SLC46A1-207ENST00000612814 CLSPNQ9HAW4 1339 aa18.7■□□□□ 0.58
SLC46A1-207ENST00000612814 DIEXFQ68CQ4 756 aaKnown RBP18.67■□□□□ 0.58
SLC46A1-207ENST00000612814 BCANQ96GW7 911 aa18.66■□□□□ 0.58
SLC46A1-207ENST00000612814 SLC4A1APQ9BWU0 796 aaKnown RBP18.6■□□□□ 0.57
SLC46A1-207ENST00000612814 GTF3C3Q9Y5Q9 886 aa18.55■□□□□ 0.56
SLC46A1-207ENST00000612814 CDK11AQ9UQ88 783 aaPredicted RBP18.35■□□□□ 0.53
SLC46A1-207ENST00000612814 NEUROD1Q13562 356 aa18.33■□□□□ 0.52
SLC46A1-207ENST00000612814 BCL11AQ9H165 835 aa18.29■□□□□ 0.52
SLC46A1-207ENST00000612814 FAM50AQ14320 339 aaKnown RBP18.28■□□□□ 0.52
SLC46A1-207ENST00000612814 TRIM52Q96A61 297 aa18.22■□□□□ 0.51
SLC46A1-207ENST00000612814 ZBTB47Q9UFB7 747 aaPredicted RBP18.22■□□□□ 0.51
SLC46A1-207ENST00000612814 ANP32CO43423 234 aa18.2■□□□□ 0.5
SLC46A1-207ENST00000612814 EIF5BO60841 1220 aaKnown RBP18.2■□□□□ 0.5
SLC46A1-207ENST00000612814 ZNF326Q5BKZ1 582 aaKnown RBP18.16■□□□□ 0.5
SLC46A1-207ENST00000612814 NPM2Q86SE8 214 aaKnown RBP18.14■□□□□ 0.49
SLC46A1-207ENST00000612814 ACIN1Q9UKV3 1341 aaKnown RBP18.1■□□□□ 0.49
SLC46A1-207ENST00000612814 CANXP27824 592 aaKnown RBP18.08■□□□□ 0.49
SLC46A1-207ENST00000612814 ANP32AP39687 249 aaKnown RBP18.07■□□□□ 0.48
SLC46A1-207ENST00000612814 PABPN1Q86U42 306 aaKnown RBP eCLIP18.06■□□□□ 0.48
SLC46A1-207ENST00000612814 SLC24A1O60721 1099 aa18.04■□□□□ 0.48
SLC46A1-207ENST00000612814 ARID3CA6NKF2 412 aa17.99■□□□□ 0.47
SLC46A1-207ENST00000612814 FBLN2P98095 1184 aa17.96■□□□□ 0.47
SLC46A1-207ENST00000612814 FKBP8Q14318 412 aa17.92■□□□□ 0.46
SLC46A1-207ENST00000612814 NEFMP07197 916 aa17.92■□□□□ 0.46
SLC46A1-207ENST00000612814 NBR1Q14596 966 aa17.86■□□□□ 0.45
SLC46A1-207ENST00000612814 ANP32BQ92688 251 aaKnown RBP17.83■□□□□ 0.45
SLC46A1-207ENST00000612814 ARXQ96QS3 562 aa17.83■□□□□ 0.44
SLC46A1-207ENST00000612814 P3H3Q8IVL6 736 aa17.82■□□□□ 0.44
SLC46A1-207ENST00000612814 HSP90AA1P07900 732 aaKnown RBP17.79■□□□□ 0.44
SLC46A1-207ENST00000612814 PLPPR3Q6T4P5 718 aa17.77■□□□□ 0.44
SLC46A1-207ENST00000612814 GLIPR1L2Q4G1C9 344 aa17.77■□□□□ 0.44
SLC46A1-207ENST00000612814 ABCC9O60706 1549 aa17.74■□□□□ 0.43
SLC46A1-207ENST00000612814 HNRNPUQ00839 825 aaKnown RBP eCLIP17.7■□□□□ 0.42
SLC46A1-207ENST00000612814 SALL2Q9Y467 1007 aaPredicted RBP17.7■□□□□ 0.42
SLC46A1-207ENST00000612814 ESF1Q9H501 851 aaKnown RBP17.68■□□□□ 0.42
SLC46A1-207ENST00000612814 FAM9BQ8IZU0 186 aa17.67■□□□□ 0.42
SLC46A1-207ENST00000612814 ZNF777Q9ULD5 760 aaPredicted RBP17.65■□□□□ 0.42
SLC46A1-207ENST00000612814 UPF2Q9HAU5 1272 aaKnown RBP17.64■□□□□ 0.41
SLC46A1-207ENST00000612814 DDX10Q13206 875 aaKnown RBP17.61■□□□□ 0.41
SLC46A1-207ENST00000612814 IRX6P78412 446 aaPredicted RBP17.59■□□□□ 0.41
SLC46A1-207ENST00000612814 SCAF1Q9H7N4 1312 aaKnown RBP17.58■□□□□ 0.41
SLC46A1-207ENST00000612814 CCDC136Q96JN2 1154 aa17.58■□□□□ 0.4
SLC46A1-207ENST00000612814 SENP3Q9H4L4 574 aaPredicted RBP17.5■□□□□ 0.39
SLC46A1-207ENST00000612814 CHGAP10645 457 aaKnown RBP17.48■□□□□ 0.39
SLC46A1-207ENST00000612814 STAG3Q9UJ98 1225 aa17.47■□□□□ 0.39
SLC46A1-207ENST00000612814 TONSLQ96HA7 1378 aa17.47■□□□□ 0.39
SLC46A1-207ENST00000612814 NPM1P06748 294 aaKnown RBP eCLIP17.43■□□□□ 0.38
SLC46A1-207ENST00000612814 TMC1Q8TDI8 760 aa17.41■□□□□ 0.38
SLC46A1-207ENST00000612814 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.41■□□□□ 0.38
SLC46A1-207ENST00000612814 MIER1Q8N108 512 aa17.39■□□□□ 0.37
SLC46A1-207ENST00000612814 PLEKHG5O94827 1062 aa17.38■□□□□ 0.37
SLC46A1-207ENST00000612814 CDK11BP21127 795 aaKnown RBP17.38■□□□□ 0.37
SLC46A1-207ENST00000612814 HIRIP3Q9BW71 556 aaPredicted RBP17.36■□□□□ 0.37
SLC46A1-207ENST00000612814 MRS2Q9HD23 443 aa17.36■□□□□ 0.37
SLC46A1-207ENST00000612814 RTN4Q9NQC3 1192 aaKnown RBP17.34■□□□□ 0.37
SLC46A1-207ENST00000612814 CSRNP3Q8WYN3 585 aa17.33■□□□□ 0.37
SLC46A1-207ENST00000612814 TRIM44Q96DX7 344 aaPredicted RBP17.32■□□□□ 0.36
SLC46A1-207ENST00000612814 WDR43Q15061 677 aaKnown RBP eCLIP17.31■□□□□ 0.36
SLC46A1-207ENST00000612814 SENP3-EIF4A1A0A087X0R7 540 aa17.3■□□□□ 0.36
SLC46A1-207ENST00000612814 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.29■□□□□ 0.36
SLC46A1-207ENST00000612814 CHIC2Q9UKJ5 165 aa17.29■□□□□ 0.36
SLC46A1-207ENST00000612814 ANP32EQ9BTT0 268 aa17.27■□□□□ 0.36
SLC46A1-207ENST00000612814 TPRNQ4KMQ1 711 aa17.25■□□□□ 0.35
SLC46A1-207ENST00000612814 NCLP19338 710 aaKnown RBP17.24■□□□□ 0.35
SLC46A1-207ENST00000612814 KDM2AQ9Y2K7 1162 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms