RNA–Protein interactions for RNA: ENST00000610578.4

LINC00869-206, long intergenic non-protein coding RNA 869, humanhuman

TSL 1 (best) BASIC

Gene LINC00869, Length 5,734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00869-206ENST00000610578 DCAF8L2P0C7V8 631 aa22.55■■□□□ 1.2
LINC00869-206ENST00000610578 SUPT5HO00267 1087 aaKnown RBP21.26■□□□□ 0.99
LINC00869-206ENST00000610578 NISCHQ9Y2I1 1504 aa21.16■□□□□ 0.98
LINC00869-206ENST00000610578 SHROOM4Q9ULL8 1493 aa20.86■□□□□ 0.93
LINC00869-206ENST00000610578 EHMT2Q96KQ7 1210 aa20.66■□□□□ 0.9
LINC00869-206ENST00000610578 APLP2Q06481 763 aa20.43■□□□□ 0.86
LINC00869-206ENST00000610578 PELP1Q8IZL8 1130 aaKnown RBP20.33■□□□□ 0.85
LINC00869-206ENST00000610578 FAM9AQ8IZU1 332 aaPredicted RBP20.25■□□□□ 0.83
LINC00869-206ENST00000610578 TTBK1Q5TCY1 1321 aaPredicted RBP19.96■□□□□ 0.79
LINC00869-206ENST00000610578 RANGAP1P46060 587 aaPredicted RBP19.82■□□□□ 0.76
LINC00869-206ENST00000610578 PCGF6Q9BYE7 350 aa19.74■□□□□ 0.75
LINC00869-206ENST00000610578 ATP1B4Q9UN42 357 aaPredicted RBP19.73■□□□□ 0.75
LINC00869-206ENST00000610578 TRIM41Q8WV44 630 aa19.72■□□□□ 0.75
LINC00869-206ENST00000610578 UBTFP17480 764 aaKnown RBP19.56■□□□□ 0.72
LINC00869-206ENST00000610578 CCER1Q8TC90 406 aaPredicted RBP19.56■□□□□ 0.72
LINC00869-206ENST00000610578 ZEB1P37275 1124 aaPredicted RBP19.55■□□□□ 0.72
LINC00869-206ENST00000610578 CENPBP07199 599 aaPredicted RBP19.51■□□□□ 0.71
LINC00869-206ENST00000610578 ERICH6Q7L0X2 663 aa19.48■□□□□ 0.71
LINC00869-206ENST00000610578 NEFLP07196 543 aa19.22■□□□□ 0.67
LINC00869-206ENST00000610578 YTHDC1Q96MU7 727 aaKnown RBP19.1■□□□□ 0.65
LINC00869-206ENST00000610578 PPARGC1BQ86YN6 1023 aaKnown RBP19.09■□□□□ 0.65
LINC00869-206ENST00000610578 MYT1LQ9UL68 1186 aa19.09■□□□□ 0.65
LINC00869-206ENST00000610578 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.06■□□□□ 0.64
LINC00869-206ENST00000610578 HNRNPUL2Q1KMD3 747 aaKnown RBP19.06■□□□□ 0.64
LINC00869-206ENST00000610578 ITGAEP38570 1179 aa18.95■□□□□ 0.62
LINC00869-206ENST00000610578 TRIM26Q12899 539 aaPredicted RBP18.94■□□□□ 0.62
LINC00869-206ENST00000610578 POLR3GLQ9BT43 218 aa18.89■□□□□ 0.61
LINC00869-206ENST00000610578 DAXXQ9UER7 740 aaPredicted RBP18.73■□□□□ 0.59
LINC00869-206ENST00000610578 CHIC1Q5VXU3 224 aa18.68■□□□□ 0.58
LINC00869-206ENST00000610578 LOC105371045A0A1W2PR82 267 aa18.67■□□□□ 0.58
LINC00869-206ENST00000610578 CNGB1Q14028 1251 aaPredicted RBP18.63■□□□□ 0.57
LINC00869-206ENST00000610578 HRCP23327 699 aa18.63■□□□□ 0.57
LINC00869-206ENST00000610578 SLC4A1APQ9BWU0 796 aaKnown RBP18.62■□□□□ 0.57
LINC00869-206ENST00000610578 MYT1Q01538 1121 aa18.56■□□□□ 0.56
LINC00869-206ENST00000610578 FAM50AQ14320 339 aaKnown RBP18.49■□□□□ 0.55
LINC00869-206ENST00000610578 PABPN1Q86U42 306 aaKnown RBP eCLIP18.48■□□□□ 0.55
LINC00869-206ENST00000610578 ABCC9O60706 1549 aa18.47■□□□□ 0.55
LINC00869-206ENST00000610578 TRIM52Q96A61 297 aa18.43■□□□□ 0.54
LINC00869-206ENST00000610578 CLSPNQ9HAW4 1339 aa18.34■□□□□ 0.53
LINC00869-206ENST00000610578 ZNF316A6NFI3 1004 aaPredicted RBP18.28■□□□□ 0.52
LINC00869-206ENST00000610578 NEUROD1Q13562 356 aa18.28■□□□□ 0.52
LINC00869-206ENST00000610578 DIEXFQ68CQ4 756 aaKnown RBP18.28■□□□□ 0.52
LINC00869-206ENST00000610578 FBLN2P98095 1184 aa18.27■□□□□ 0.51
LINC00869-206ENST00000610578 ZNF326Q5BKZ1 582 aaKnown RBP18.2■□□□□ 0.5
LINC00869-206ENST00000610578 RTL5Q5HYW3 569 aaPredicted RBP18.17■□□□□ 0.5
LINC00869-206ENST00000610578 ANP32CO43423 234 aa18.1■□□□□ 0.49
LINC00869-206ENST00000610578 ZBTB47Q9UFB7 747 aaPredicted RBP18.08■□□□□ 0.49
LINC00869-206ENST00000610578 BCANQ96GW7 911 aa18.04■□□□□ 0.48
LINC00869-206ENST00000610578 P3H3Q8IVL6 736 aa18.01■□□□□ 0.47
LINC00869-206ENST00000610578 ARID3CA6NKF2 412 aa18■□□□□ 0.47
LINC00869-206ENST00000610578 SLC24A1O60721 1099 aa17.99■□□□□ 0.47
LINC00869-206ENST00000610578 NEFMP07197 916 aa17.98■□□□□ 0.47
LINC00869-206ENST00000610578 CANXP27824 592 aaKnown RBP17.96■□□□□ 0.47
LINC00869-206ENST00000610578 ZNF777Q9ULD5 760 aaPredicted RBP17.94■□□□□ 0.46
LINC00869-206ENST00000610578 CSRNP3Q8WYN3 585 aa17.91■□□□□ 0.46
LINC00869-206ENST00000610578 CDK11AQ9UQ88 783 aaPredicted RBP17.91■□□□□ 0.46
LINC00869-206ENST00000610578 ESF1Q9H501 851 aaKnown RBP17.85■□□□□ 0.45
LINC00869-206ENST00000610578 BCL11AQ9H165 835 aa17.85■□□□□ 0.45
LINC00869-206ENST00000610578 GTF3C3Q9Y5Q9 886 aa17.79■□□□□ 0.44
LINC00869-206ENST00000610578 STAG3Q9UJ98 1225 aa17.75■□□□□ 0.43
LINC00869-206ENST00000610578 SCRIBQ14160 1630 aa17.74■□□□□ 0.43
LINC00869-206ENST00000610578 NPM1P06748 294 aaKnown RBP eCLIP17.73■□□□□ 0.43
LINC00869-206ENST00000610578 CHGAP10645 457 aaKnown RBP17.72■□□□□ 0.43
LINC00869-206ENST00000610578 TONSLQ96HA7 1378 aa17.67■□□□□ 0.42
LINC00869-206ENST00000610578 PLPPR3Q6T4P5 718 aa17.64■□□□□ 0.41
LINC00869-206ENST00000610578 ANP32AP39687 249 aaKnown RBP17.62■□□□□ 0.41
LINC00869-206ENST00000610578 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.54■□□□□ 0.4
LINC00869-206ENST00000610578 NPM2Q86SE8 214 aaKnown RBP17.53■□□□□ 0.4
LINC00869-206ENST00000610578 CHIC2Q9UKJ5 165 aa17.52■□□□□ 0.39
LINC00869-206ENST00000610578 ACIN1Q9UKV3 1341 aaKnown RBP17.5■□□□□ 0.39
LINC00869-206ENST00000610578 TSPY4P0CV99 314 aa17.47■□□□□ 0.39
LINC00869-206ENST00000610578 TSPY10P0CW01 314 aa17.47■□□□□ 0.39
LINC00869-206ENST00000610578 FAM9BQ8IZU0 186 aa17.47■□□□□ 0.39
LINC00869-206ENST00000610578 HNRNPUQ00839 825 aaKnown RBP eCLIP17.46■□□□□ 0.39
LINC00869-206ENST00000610578 ZCCHC6Q5VYS8 1495 aaKnown RBP17.46■□□□□ 0.39
LINC00869-206ENST00000610578 HSP90AA1P07900 732 aaKnown RBP17.46■□□□□ 0.39
LINC00869-206ENST00000610578 CHMP7Q8WUX9 453 aaPredicted RBP17.45■□□□□ 0.38
LINC00869-206ENST00000610578 UPF2Q9HAU5 1272 aaKnown RBP17.45■□□□□ 0.38
LINC00869-206ENST00000610578 DDX10Q13206 875 aaKnown RBP17.44■□□□□ 0.38
LINC00869-206ENST00000610578 FKBP8Q14318 412 aa17.43■□□□□ 0.38
LINC00869-206ENST00000610578 MTUS2Q5JR59 1369 aa17.42■□□□□ 0.38
LINC00869-206ENST00000610578 TMC1Q8TDI8 760 aa17.41■□□□□ 0.38
LINC00869-206ENST00000610578 SALL2Q9Y467 1007 aaPredicted RBP17.41■□□□□ 0.38
LINC00869-206ENST00000610578 ANP32BQ92688 251 aaKnown RBP17.4■□□□□ 0.38
LINC00869-206ENST00000610578 WDR43Q15061 677 aaKnown RBP eCLIP17.4■□□□□ 0.38
LINC00869-206ENST00000610578 KDM2AQ9Y2K7 1162 aa17.39■□□□□ 0.37
LINC00869-206ENST00000610578 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.38■□□□□ 0.37
LINC00869-206ENST00000610578 DCAF1Q9Y4B6 1507 aa17.35■□□□□ 0.37
LINC00869-206ENST00000610578 SCAF1Q9H7N4 1312 aaKnown RBP17.34■□□□□ 0.37
LINC00869-206ENST00000610578 MRS2Q9HD23 443 aa17.28■□□□□ 0.36
LINC00869-206ENST00000610578 CCDC136Q96JN2 1154 aa17.28■□□□□ 0.36
LINC00869-206ENST00000610578 CLIP1P30622 1438 aa17.28■□□□□ 0.36
LINC00869-206ENST00000610578 CCDC180Q9P1Z9 1646 aa17.27■□□□□ 0.36
LINC00869-206ENST00000610578 PPP1R15AO75807 674 aaPredicted RBP17.26■□□□□ 0.35
LINC00869-206ENST00000610578 KCNH8Q96L42 1107 aa17.25■□□□□ 0.35
LINC00869-206ENST00000610578 RB1CC1Q8TDY2 1594 aa17.24■□□□□ 0.35
LINC00869-206ENST00000610578 RSF1Q96T23 1441 aaPredicted RBP17.23■□□□□ 0.35
LINC00869-206ENST00000610578 RRP7BPQ9NSQ0 103 aa17.23■□□□□ 0.35
LINC00869-206ENST00000610578 PLEKHD1A6NEE1 506 aa17.23■□□□□ 0.35
LINC00869-206ENST00000610578 MYH16Q9H6N6 1097 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms