Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 KRT18P9-201ENST00000604826 1300 ntBASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 AC067931.2-201ENST00000623655 2003 ntBASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 BANF1P3-201ENST00000412556 261 ntBASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 AC073869.2-201ENST00000417338 1026 ntBASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 DNAJB1P1-201ENST00000429417 1024 ntBASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 Z97180.1-201ENST00000445173 988 ntBASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 NDUFB10P1-201ENST00000567319 521 ntBASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 PHBP15-201ENST00000574228 665 ntBASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 FMO6P-201ENST00000236166 1620 ntBASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 ABCD1P2-201ENST00000429313 1601 ntBASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 VENTXP1-201ENST00000569334 2716 ntBASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 CALR4P-201ENST00000431943 946 ntBASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 PTPA-217ENST00000434095 870 ntTSL 2 BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 AC003958.1-201ENST00000435883 421 ntBASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
HLA-DRB4X5D2U9 RPSAP15-201ENST00000448168 861 ntBASIC10.41□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms