RNA–Protein interactions for RNA: ENST00000218224.8

PQBP1-201, Transcript of polyglutamine binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PQBP1, Length 1,113 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PQBP1-201ENST00000218224 NISCHQ9Y2I1 1504 aa36.78■■■■□ 3.48
PQBP1-201ENST00000218224 ABCC9O60706 1549 aa33.23■■■□□ 2.91
PQBP1-201ENST00000218224 CCDC180Q9P1Z9 1646 aa33.02■■■□□ 2.88
PQBP1-201ENST00000218224 RB1CC1Q8TDY2 1594 aa31.51■■■□□ 2.63
PQBP1-201ENST00000218224 DNAJC5BQ9UF47 199 aa31.31■■■□□ 2.6
PQBP1-201ENST00000218224 NACADO15069 1562 aa31.25■■■□□ 2.59
PQBP1-201ENST00000218224 DCAF8L2P0C7V8 631 aa31.2■■■□□ 2.59
PQBP1-201ENST00000218224 PABPN1Q86U42 306 aaKnown RBP eCLIP30.95■■■□□ 2.55
PQBP1-201ENST00000218224 UNC13AQ9UPW8 1703 aa30.84■■■□□ 2.53
PQBP1-201ENST00000218224 MYO15BQ96JP2 1530 aa30.73■■■□□ 2.51
PQBP1-201ENST00000218224 BICRAQ9NZM4 1560 aa30.63■■■□□ 2.49
PQBP1-201ENST00000218224 ZCCHC6Q5VYS8 1495 aaKnown RBP30.44■■■□□ 2.46
PQBP1-201ENST00000218224 DCAF1Q9Y4B6 1507 aa30.31■■■□□ 2.44
PQBP1-201ENST00000218224 SCRIBQ14160 1630 aa30.17■■■□□ 2.42
PQBP1-201ENST00000218224 SHROOM4Q9ULL8 1493 aa30.1■■■□□ 2.41
PQBP1-201ENST00000218224 CC2D2AQ9P2K1 1620 aa29.99■■■□□ 2.39
PQBP1-201ENST00000218224 CECR2Q9BXF3 1484 aa29.92■■■□□ 2.38
PQBP1-201ENST00000218224 EIF4G1Q04637 1599 aaKnown RBP29.88■■■□□ 2.37
PQBP1-201ENST00000218224 NCAPD3P42695 1498 aa28.85■■■□□ 2.21
PQBP1-201ENST00000218224 DNAJC5Q9H3Z4 198 aa28.78■■■□□ 2.2
PQBP1-201ENST00000218224 ATAD2BQ9ULI0 1458 aa28.78■■■□□ 2.2
PQBP1-201ENST00000218224 SMARCA4P51532 1647 aa28.72■■■□□ 2.19
PQBP1-201ENST00000218224 ERCC6Q03468 1493 aa28.69■■■□□ 2.18
PQBP1-201ENST00000218224 SMARCA2P51531 1590 aa28.67■■■□□ 2.18
PQBP1-201ENST00000218224 HMGXB3Q12766 1538 aa28.63■■■□□ 2.17
PQBP1-201ENST00000218224 CUX2O14529 1486 aa28.62■■■□□ 2.17
PQBP1-201ENST00000218224 BAZ1AQ9NRL2 1556 aaPredicted RBP28.54■■■□□ 2.16
PQBP1-201ENST00000218224 NESP48681 1621 aa28.52■■■□□ 2.16
PQBP1-201ENST00000218224 BAZ1BQ9UIG0 1483 aaKnown RBP28.5■■■□□ 2.15
PQBP1-201ENST00000218224 PEG3Q9GZU2 1588 aa28.4■■■□□ 2.14
PQBP1-201ENST00000218224 MROH2BQ7Z745 1585 aa28.37■■■□□ 2.13
PQBP1-201ENST00000218224 LAMC3Q9Y6N6 1575 aa28.23■■■□□ 2.11
PQBP1-201ENST00000218224 THOC2Q8NI27 1593 aaKnown RBP28.21■■■□□ 2.11
PQBP1-201ENST00000218224 KIF21AQ7Z4S6 1674 aa28.13■■■□□ 2.09
PQBP1-201ENST00000218224 PDS5BQ9NTI5 1447 aa28.08■■■□□ 2.09
PQBP1-201ENST00000218224 WIZO95785 1651 aa28.03■■■□□ 2.08
PQBP1-201ENST00000218224 CADPSQ9ULU8 1353 aa27.99■■■□□ 2.07
PQBP1-201ENST00000218224 MRC2Q9UBG0 1479 aa27.86■■■□□ 2.05
PQBP1-201ENST00000218224 WDR62O43379 1518 aa27.78■■■□□ 2.04
PQBP1-201ENST00000218224 CEP164Q9UPV0 1460 aa27.73■■■□□ 2.03
PQBP1-201ENST00000218224 RSF1Q96T23 1441 aaPredicted RBP27.72■■■□□ 2.03
PQBP1-201ENST00000218224 FANCD2Q9BXW9 1451 aa27.7■■■□□ 2.02
PQBP1-201ENST00000218224 CFTRP13569 1480 aa27.64■■■□□ 2.02
PQBP1-201ENST00000218224 TOP2AP11388 1531 aaKnown RBP27.62■■■□□ 2.01
PQBP1-201ENST00000218224 TRIM41Q8WV44 630 aa27.55■■■□□ 2
PQBP1-201ENST00000218224 URB2Q14146 1524 aaKnown RBP27.48■■□□□ 1.99
PQBP1-201ENST00000218224 PRDM2Q13029 1718 aa27.36■■□□□ 1.97
PQBP1-201ENST00000218224 CCDC88BA6NC98 1476 aa27.34■■□□□ 1.97
PQBP1-201ENST00000218224 OSCARQ8IYS5 282 aa27.33■■□□□ 1.97
PQBP1-201ENST00000218224 ZNF608Q9ULD9 1512 aaPredicted RBP27.18■■□□□ 1.94
PQBP1-201ENST00000218224 IFT140Q96RY7 1462 aa27.16■■□□□ 1.94
PQBP1-201ENST00000218224 TOPBP1Q92547 1522 aa27.16■■□□□ 1.94
PQBP1-201ENST00000218224 ABCC8Q09428 1581 aa27.03■■□□□ 1.92
PQBP1-201ENST00000218224 DNMBPQ6XZF7 1577 aa27.03■■□□□ 1.92
PQBP1-201ENST00000218224 RIMBP3CA6NJZ7 1639 aa27■■□□□ 1.91
PQBP1-201ENST00000218224 RIMBP3BA6NNM3 1639 aa27■■□□□ 1.91
PQBP1-201ENST00000218224 RIMBP3Q9UFD9 1639 aa27■■□□□ 1.91
PQBP1-201ENST00000218224 EIF4G3O43432 1585 aaKnown RBP27■■□□□ 1.91
PQBP1-201ENST00000218224 AQRO60306 1485 aaKnown RBP eCLIP26.93■■□□□ 1.96e-7■■■■■ 33
PQBP1-201ENST00000218224 TARBP1Q13395 1621 aaKnown RBP26.92■■□□□ 1.9
PQBP1-201ENST00000218224 ARHGEF11O15085 1522 aa26.9■■□□□ 1.9
PQBP1-201ENST00000218224 POLA1P09884 1462 aaPredicted RBP26.87■■□□□ 1.89
PQBP1-201ENST00000218224 CHD1O14646 1710 aa26.85■■□□□ 1.89
PQBP1-201ENST00000218224 RAD54L2Q9Y4B4 1467 aa26.81■■□□□ 1.88
PQBP1-201ENST00000218224 FBLN2P98095 1184 aa26.81■■□□□ 1.88
PQBP1-201ENST00000218224 SOGA1O94964 1423 aa26.75■■□□□ 1.87
PQBP1-201ENST00000218224 CYB5RLQ6IPT4 315 aa26.75■■□□□ 1.87
PQBP1-201ENST00000218224 TDRD9Q8NDG6 1382 aaKnown RBP26.74■■□□□ 1.87
PQBP1-201ENST00000218224 FGD5Q6ZNL6 1462 aa26.69■■□□□ 1.86
PQBP1-201ENST00000218224 CUX1P39880 1505 aa26.66■■□□□ 1.86
PQBP1-201ENST00000218224 SNAPC4Q5SXM2 1469 aa26.63■■□□□ 1.85
PQBP1-201ENST00000218224 ARAP1Q96P48 1450 aa26.63■■□□□ 1.85
PQBP1-201ENST00000218224 WDR97A6NE52 1622 aa26.57■■□□□ 1.84
PQBP1-201ENST00000218224 CHMP7Q8WUX9 453 aaPredicted RBP26.54■■□□□ 1.84
PQBP1-201ENST00000218224 GRIN2BQ13224 1484 aa26.51■■□□□ 1.83
PQBP1-201ENST00000218224 MAGI1Q96QZ7 1491 aaPredicted RBP26.51■■□□□ 1.83
PQBP1-201ENST00000218224 TRHP20396 242 aaPredicted RBP26.5■■□□□ 1.83
PQBP1-201ENST00000218224 CLASP1Q7Z460 1538 aa26.49■■□□□ 1.83
PQBP1-201ENST00000218224 SUPT5HO00267 1087 aaKnown RBP26.48■■□□□ 1.83
PQBP1-201ENST00000218224 SYNJ1O43426 1573 aa26.46■■□□□ 1.83
PQBP1-201ENST00000218224 SYNJ2O15056 1496 aa26.44■■□□□ 1.82
PQBP1-201ENST00000218224 GAPVD1Q14C86 1478 aa26.42■■□□□ 1.82
PQBP1-201ENST00000218224 PBRM1Q86U86 1689 aa26.42■■□□□ 1.82
PQBP1-201ENST00000218224 ABCA10Q8WWZ4 1543 aa26.35■■□□□ 1.81
PQBP1-201ENST00000218224 ABCA5Q8WWZ7 1642 aa26.34■■□□□ 1.81
PQBP1-201ENST00000218224 WRNQ14191 1432 aaPredicted RBP eCLIP26.23■■□□□ 1.79
PQBP1-201ENST00000218224 GRIN2AQ12879 1464 aa26.18■■□□□ 1.78
PQBP1-201ENST00000218224 TOP2BQ02880 1626 aa26.17■■□□□ 1.78
PQBP1-201ENST00000218224 BIVM-ERCC5R4GMW8 1640 aa26.17■■□□□ 1.78
PQBP1-201ENST00000218224 ADAMTS12P58397 1594 aa26.16■■□□□ 1.78
PQBP1-201ENST00000218224 ERCC6L2Q5T890 1561 aa26.14■■□□□ 1.78
PQBP1-201ENST00000218224 CEP170Q5SW79 1584 aa26.12■■□□□ 1.77
PQBP1-201ENST00000218224 NUP160Q12769 1436 aa26.08■■□□□ 1.77
PQBP1-201ENST00000218224 FHAD1B1AJZ9 1412 aa26.06■■□□□ 1.76
PQBP1-201ENST00000218224 ERICH3Q5RHP9 1530 aa26.01■■□□□ 1.75
PQBP1-201ENST00000218224 SHROOM2Q13796 1616 aa25.98■■□□□ 1.75
PQBP1-201ENST00000218224 PRG4Q92954 1404 aaPredicted RBP25.88■■□□□ 1.73
PQBP1-201ENST00000218224 JPH4Q96JJ6 628 aa25.85■■□□□ 1.73
PQBP1-201ENST00000218224 AEBP2Q6ZN18 517 aaPredicted RBP25.8■■□□□ 1.72
PQBP1-201ENST00000218224 RUSC2Q8N2Y8 1516 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms