RNA–Protein interactions for RNA: ENST00000340342.10

CTSL-201, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-201ENST00000340342 NISCHQ9Y2I1 1504 aa34.27■■■■□ 3.08
CTSL-201ENST00000340342 CCDC180Q9P1Z9 1646 aa30.46■■■□□ 2.47
CTSL-201ENST00000340342 ABCC9O60706 1549 aa29.87■■■□□ 2.37
CTSL-201ENST00000340342 RB1CC1Q8TDY2 1594 aa28.73■■■□□ 2.19
CTSL-201ENST00000340342 NACADO15069 1562 aa28.69■■■□□ 2.18
CTSL-201ENST00000340342 DCAF8L2P0C7V8 631 aa28.68■■■□□ 2.18
CTSL-201ENST00000340342 ZCCHC6Q5VYS8 1495 aaKnown RBP28.59■■■□□ 2.17
CTSL-201ENST00000340342 MYO15BQ96JP2 1530 aa28.5■■■□□ 2.15
CTSL-201ENST00000340342 DCAF1Q9Y4B6 1507 aa28.33■■■□□ 2.13
CTSL-201ENST00000340342 UNC13AQ9UPW8 1703 aa28.07■■■□□ 2.08
CTSL-201ENST00000340342 PABPN1Q86U42 306 aaKnown RBP eCLIP27.92■■■□□ 2.06
CTSL-201ENST00000340342 BICRAQ9NZM4 1560 aa27.84■■■□□ 2.05
CTSL-201ENST00000340342 SCRIBQ14160 1630 aa27.81■■■□□ 2.04
CTSL-201ENST00000340342 SHROOM4Q9ULL8 1493 aa27.56■■■□□ 2
CTSL-201ENST00000340342 DNAJC5BQ9UF47 199 aa27.54■■■□□ 2
CTSL-201ENST00000340342 EIF4G1Q04637 1599 aaKnown RBP27.11■■□□□ 1.93
CTSL-201ENST00000340342 CC2D2AQ9P2K1 1620 aa27.04■■□□□ 1.92
CTSL-201ENST00000340342 CECR2Q9BXF3 1484 aa26.87■■□□□ 1.89
CTSL-201ENST00000340342 SMARCA4P51532 1647 aa26.59■■□□□ 1.85
CTSL-201ENST00000340342 BAZ1AQ9NRL2 1556 aaPredicted RBP26.54■■□□□ 1.84
CTSL-201ENST00000340342 NCAPD3P42695 1498 aa26.48■■□□□ 1.83
CTSL-201ENST00000340342 ATAD2BQ9ULI0 1458 aa26.45■■□□□ 1.82
CTSL-201ENST00000340342 MROH2BQ7Z745 1585 aa26.44■■□□□ 1.82
CTSL-201ENST00000340342 SMARCA2P51531 1590 aa26.42■■□□□ 1.82
CTSL-201ENST00000340342 PEG3Q9GZU2 1588 aa26.32■■□□□ 1.8
CTSL-201ENST00000340342 HMGXB3Q12766 1538 aa26.3■■□□□ 1.8
CTSL-201ENST00000340342 BAZ1BQ9UIG0 1483 aaKnown RBP26.22■■□□□ 1.79
CTSL-201ENST00000340342 WIZO95785 1651 aa26.21■■□□□ 1.79
CTSL-201ENST00000340342 RSF1Q96T23 1441 aaPredicted RBP26.18■■□□□ 1.78
CTSL-201ENST00000340342 TOP2AP11388 1531 aaKnown RBP25.88■■□□□ 1.73
CTSL-201ENST00000340342 NESP48681 1621 aa25.81■■□□□ 1.72
CTSL-201ENST00000340342 LAMC3Q9Y6N6 1575 aa25.79■■□□□ 1.72
CTSL-201ENST00000340342 ERCC6Q03468 1493 aa25.77■■□□□ 1.72
CTSL-201ENST00000340342 CADPSQ9ULU8 1353 aa25.7■■□□□ 1.71
CTSL-201ENST00000340342 SUPT5HO00267 1087 aaKnown RBP25.68■■□□□ 1.7
CTSL-201ENST00000340342 PDS5BQ9NTI5 1447 aa25.63■■□□□ 1.69
CTSL-201ENST00000340342 CCDC88BA6NC98 1476 aa25.58■■□□□ 1.69
CTSL-201ENST00000340342 CUX2O14529 1486 aa25.55■■□□□ 1.68
CTSL-201ENST00000340342 CFTRP13569 1480 aa25.52■■□□□ 1.68
CTSL-201ENST00000340342 KIF21AQ7Z4S6 1674 aa25.51■■□□□ 1.67
CTSL-201ENST00000340342 THOC2Q8NI27 1593 aaKnown RBP25.43■■□□□ 1.66
CTSL-201ENST00000340342 FANCD2Q9BXW9 1451 aa25.38■■□□□ 1.65
CTSL-201ENST00000340342 PRDM2Q13029 1718 aa25.36■■□□□ 1.65
CTSL-201ENST00000340342 CEP164Q9UPV0 1460 aa25.34■■□□□ 1.65
CTSL-201ENST00000340342 MRC2Q9UBG0 1479 aa25.33■■□□□ 1.65
CTSL-201ENST00000340342 WDR62O43379 1518 aa25.24■■□□□ 1.63
CTSL-201ENST00000340342 URB2Q14146 1524 aaKnown RBP25.1■■□□□ 1.61
CTSL-201ENST00000340342 ABCC8Q09428 1581 aa25.02■■□□□ 1.6
CTSL-201ENST00000340342 TOPBP1Q92547 1522 aa24.96■■□□□ 1.59
CTSL-201ENST00000340342 DNAJC5Q9H3Z4 198 aa24.93■■□□□ 1.58
CTSL-201ENST00000340342 DNMBPQ6XZF7 1577 aa24.91■■□□□ 1.58
CTSL-201ENST00000340342 IFT140Q96RY7 1462 aa24.83■■□□□ 1.57
CTSL-201ENST00000340342 CUX1P39880 1505 aa24.81■■□□□ 1.56
CTSL-201ENST00000340342 POLA1P09884 1462 aaPredicted RBP24.73■■□□□ 1.55
CTSL-201ENST00000340342 TARBP1Q13395 1621 aaKnown RBP24.7■■□□□ 1.54
CTSL-201ENST00000340342 ZNF608Q9ULD9 1512 aaPredicted RBP24.69■■□□□ 1.54
CTSL-201ENST00000340342 SOGA1O94964 1423 aa24.67■■□□□ 1.54
CTSL-201ENST00000340342 FGD5Q6ZNL6 1462 aa24.67■■□□□ 1.54
CTSL-201ENST00000340342 SYNJ1O43426 1573 aa24.67■■□□□ 1.54
CTSL-201ENST00000340342 WRNQ14191 1432 aaPredicted RBP eCLIP24.67■■□□□ 1.54
CTSL-201ENST00000340342 BIVM-ERCC5R4GMW8 1640 aa24.63■■□□□ 1.53
CTSL-201ENST00000340342 TOP2BQ02880 1626 aa24.63■■□□□ 1.53
CTSL-201ENST00000340342 RAD54L2Q9Y4B4 1467 aa24.62■■□□□ 1.53
CTSL-201ENST00000340342 EIF4G3O43432 1585 aaKnown RBP24.58■■□□□ 1.53
CTSL-201ENST00000340342 AQRO60306 1485 aaKnown RBP eCLIP24.58■■□□□ 1.537e-6■□□□□ 9.9
CTSL-201ENST00000340342 OSCARQ8IYS5 282 aa24.54■■□□□ 1.52
CTSL-201ENST00000340342 TDRD9Q8NDG6 1382 aaKnown RBP24.52■■□□□ 1.52
CTSL-201ENST00000340342 WDR97A6NE52 1622 aa24.52■■□□□ 1.52
CTSL-201ENST00000340342 ABCA10Q8WWZ4 1543 aa24.43■■□□□ 1.5
CTSL-201ENST00000340342 GRIN2BQ13224 1484 aa24.38■■□□□ 1.49
CTSL-201ENST00000340342 GAPVD1Q14C86 1478 aa24.37■■□□□ 1.49
CTSL-201ENST00000340342 ABCA5Q8WWZ7 1642 aa24.35■■□□□ 1.49
CTSL-201ENST00000340342 FBLN2P98095 1184 aa24.33■■□□□ 1.49
CTSL-201ENST00000340342 MAGI1Q96QZ7 1491 aaPredicted RBP24.32■■□□□ 1.48
CTSL-201ENST00000340342 PBRM1Q86U86 1689 aa24.32■■□□□ 1.48
CTSL-201ENST00000340342 CHD1O14646 1710 aa24.32■■□□□ 1.48
CTSL-201ENST00000340342 SNAPC4Q5SXM2 1469 aa24.31■■□□□ 1.48
CTSL-201ENST00000340342 CHMP7Q8WUX9 453 aaPredicted RBP24.27■■□□□ 1.48
CTSL-201ENST00000340342 SYNJ2O15056 1496 aa24.22■■□□□ 1.47
CTSL-201ENST00000340342 TRIM41Q8WV44 630 aa24.19■■□□□ 1.46
CTSL-201ENST00000340342 ERICH3Q5RHP9 1530 aa24.15■■□□□ 1.46
CTSL-201ENST00000340342 KIF27Q86VH2 1401 aa24.11■■□□□ 1.45
CTSL-201ENST00000340342 ADAMTS12P58397 1594 aa24.11■■□□□ 1.45
CTSL-201ENST00000340342 FHAD1B1AJZ9 1412 aa24.09■■□□□ 1.45
CTSL-201ENST00000340342 RIMBP3CA6NJZ7 1639 aa24.07■■□□□ 1.44
CTSL-201ENST00000340342 RIMBP3BA6NNM3 1639 aa24.07■■□□□ 1.44
CTSL-201ENST00000340342 RIMBP3Q9UFD9 1639 aa24.07■■□□□ 1.44
CTSL-201ENST00000340342 ARHGEF11O15085 1522 aa24.05■■□□□ 1.44
CTSL-201ENST00000340342 GRIN2AQ12879 1464 aa24.05■■□□□ 1.44
CTSL-201ENST00000340342 CLASP1Q7Z460 1538 aa24.04■■□□□ 1.44
CTSL-201ENST00000340342 RUSC2Q8N2Y8 1516 aa24.04■■□□□ 1.44
CTSL-201ENST00000340342 CHIC1Q5VXU3 224 aa24.04■■□□□ 1.44
CTSL-201ENST00000340342 IGF1RP08069 1367 aa24.01■■□□□ 1.43
CTSL-201ENST00000340342 CUL7Q14999 1698 aa23.97■■□□□ 1.43
CTSL-201ENST00000340342 NUP160Q12769 1436 aa23.94■■□□□ 1.42
CTSL-201ENST00000340342 CEP170Q5SW79 1584 aa23.91■■□□□ 1.42
CTSL-201ENST00000340342 CYB5RLQ6IPT4 315 aa23.9■■□□□ 1.42
CTSL-201ENST00000340342 CARMIL1Q5VZK9 1371 aa23.86■■□□□ 1.41
CTSL-201ENST00000340342 ARAP1Q96P48 1450 aa23.84■■□□□ 1.41
CTSL-201ENST00000340342 SHROOM2Q13796 1616 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms