RNA–Protein interactions for RNA: ENST00000537792.5

PMFBP1-208, Transcript of polyamine modulated factor 1 binding protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PMFBP1, Length 955 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1-208ENST00000537792 NISCHQ9Y2I1 1504 aa33.46■■■□□ 2.95
PMFBP1-208ENST00000537792 CCDC180Q9P1Z9 1646 aa29.6■■■□□ 2.33
PMFBP1-208ENST00000537792 ABCC9O60706 1549 aa28.53■■■□□ 2.16
PMFBP1-208ENST00000537792 ZCCHC6Q5VYS8 1495 aaKnown RBP27.95■■■□□ 2.07
PMFBP1-208ENST00000537792 MYO15BQ96JP2 1530 aa27.81■■■□□ 2.04
PMFBP1-208ENST00000537792 NACADO15069 1562 aa27.79■■■□□ 2.04
PMFBP1-208ENST00000537792 DCAF1Q9Y4B6 1507 aa27.79■■■□□ 2.04
PMFBP1-208ENST00000537792 DCAF8L2P0C7V8 631 aa27.74■■■□□ 2.03
PMFBP1-208ENST00000537792 RB1CC1Q8TDY2 1594 aa27.71■■■□□ 2.03
PMFBP1-208ENST00000537792 SCRIBQ14160 1630 aa26.93■■□□□ 1.9
PMFBP1-208ENST00000537792 UNC13AQ9UPW8 1703 aa26.91■■□□□ 1.9
PMFBP1-208ENST00000537792 BICRAQ9NZM4 1560 aa26.76■■□□□ 1.87
PMFBP1-208ENST00000537792 SHROOM4Q9ULL8 1493 aa26.73■■□□□ 1.87
PMFBP1-208ENST00000537792 PABPN1Q86U42 306 aaKnown RBP eCLIP26.7■■□□□ 1.86
PMFBP1-208ENST00000537792 EIF4G1Q04637 1599 aaKnown RBP26.07■■□□□ 1.76
PMFBP1-208ENST00000537792 BAZ1AQ9NRL2 1556 aaPredicted RBP25.95■■□□□ 1.74
PMFBP1-208ENST00000537792 CECR2Q9BXF3 1484 aa25.94■■□□□ 1.74
PMFBP1-208ENST00000537792 SMARCA4P51532 1647 aa25.85■■□□□ 1.73
PMFBP1-208ENST00000537792 CC2D2AQ9P2K1 1620 aa25.85■■□□□ 1.73
PMFBP1-208ENST00000537792 DNAJC5BQ9UF47 199 aa25.82■■□□□ 1.72
PMFBP1-208ENST00000537792 MROH2BQ7Z745 1585 aa25.73■■□□□ 1.71
PMFBP1-208ENST00000537792 SMARCA2P51531 1590 aa25.69■■□□□ 1.7
PMFBP1-208ENST00000537792 PEG3Q9GZU2 1588 aa25.67■■□□□ 1.7
PMFBP1-208ENST00000537792 ATAD2BQ9ULI0 1458 aa25.66■■□□□ 1.7
PMFBP1-208ENST00000537792 NCAPD3P42695 1498 aa25.64■■□□□ 1.69
PMFBP1-208ENST00000537792 RSF1Q96T23 1441 aaPredicted RBP25.61■■□□□ 1.69
PMFBP1-208ENST00000537792 HMGXB3Q12766 1538 aa25.54■■□□□ 1.68
PMFBP1-208ENST00000537792 BAZ1BQ9UIG0 1483 aaKnown RBP25.47■■□□□ 1.67
PMFBP1-208ENST00000537792 WIZO95785 1651 aa25.42■■□□□ 1.66
PMFBP1-208ENST00000537792 TOP2AP11388 1531 aaKnown RBP25.28■■□□□ 1.64
PMFBP1-208ENST00000537792 SUPT5HO00267 1087 aaKnown RBP25.16■■□□□ 1.62
PMFBP1-208ENST00000537792 CCDC88BA6NC98 1476 aa24.95■■□□□ 1.58
PMFBP1-208ENST00000537792 CADPSQ9ULU8 1353 aa24.9■■□□□ 1.58
PMFBP1-208ENST00000537792 LAMC3Q9Y6N6 1575 aa24.89■■□□□ 1.58
PMFBP1-208ENST00000537792 CFTRP13569 1480 aa24.82■■□□□ 1.56
PMFBP1-208ENST00000537792 NESP48681 1621 aa24.76■■□□□ 1.55
PMFBP1-208ENST00000537792 PDS5BQ9NTI5 1447 aa24.75■■□□□ 1.55
PMFBP1-208ENST00000537792 ERCC6Q03468 1493 aa24.64■■□□□ 1.53
PMFBP1-208ENST00000537792 PRDM2Q13029 1718 aa24.58■■□□□ 1.53
PMFBP1-208ENST00000537792 FANCD2Q9BXW9 1451 aa24.58■■□□□ 1.52
PMFBP1-208ENST00000537792 CEP164Q9UPV0 1460 aa24.53■■□□□ 1.52
PMFBP1-208ENST00000537792 KIF21AQ7Z4S6 1674 aa24.47■■□□□ 1.51
PMFBP1-208ENST00000537792 MRC2Q9UBG0 1479 aa24.42■■□□□ 1.5
PMFBP1-208ENST00000537792 THOC2Q8NI27 1593 aaKnown RBP24.37■■□□□ 1.49
PMFBP1-208ENST00000537792 ABCC8Q09428 1581 aa24.35■■□□□ 1.49
PMFBP1-208ENST00000537792 WDR62O43379 1518 aa24.32■■□□□ 1.48
PMFBP1-208ENST00000537792 CUX2O14529 1486 aa24.31■■□□□ 1.48
PMFBP1-208ENST00000537792 URB2Q14146 1524 aaKnown RBP24.26■■□□□ 1.47
PMFBP1-208ENST00000537792 DNMBPQ6XZF7 1577 aa24.23■■□□□ 1.47
PMFBP1-208ENST00000537792 TOPBP1Q92547 1522 aa24.21■■□□□ 1.47
PMFBP1-208ENST00000537792 WRNQ14191 1432 aaPredicted RBP eCLIP24.17■■□□□ 1.46
PMFBP1-208ENST00000537792 CUX1P39880 1505 aa24.13■■□□□ 1.45
PMFBP1-208ENST00000537792 TOP2BQ02880 1626 aa24.05■■□□□ 1.44
PMFBP1-208ENST00000537792 BIVM-ERCC5R4GMW8 1640 aa24.03■■□□□ 1.44
PMFBP1-208ENST00000537792 POLA1P09884 1462 aaPredicted RBP24.03■■□□□ 1.44
PMFBP1-208ENST00000537792 IFT140Q96RY7 1462 aa24.02■■□□□ 1.44
PMFBP1-208ENST00000537792 FGD5Q6ZNL6 1462 aa24.01■■□□□ 1.43
PMFBP1-208ENST00000537792 SYNJ1O43426 1573 aa23.99■■□□□ 1.43
PMFBP1-208ENST00000537792 SOGA1O94964 1423 aa23.96■■□□□ 1.43
PMFBP1-208ENST00000537792 TARBP1Q13395 1621 aaKnown RBP23.89■■□□□ 1.42
PMFBP1-208ENST00000537792 RAD54L2Q9Y4B4 1467 aa23.87■■□□□ 1.41
PMFBP1-208ENST00000537792 WDR97A6NE52 1622 aa23.86■■□□□ 1.41
PMFBP1-208ENST00000537792 TRIM41Q8WV44 630 aa23.85■■□□□ 1.41
PMFBP1-208ENST00000537792 ABCA10Q8WWZ4 1543 aa23.84■■□□□ 1.41
PMFBP1-208ENST00000537792 ZNF608Q9ULD9 1512 aaPredicted RBP23.77■■□□□ 1.4
PMFBP1-208ENST00000537792 CHIC1Q5VXU3 224 aa23.73■■□□□ 1.39
PMFBP1-208ENST00000537792 TDRD9Q8NDG6 1382 aaKnown RBP23.73■■□□□ 1.39
PMFBP1-208ENST00000537792 EIF4G3O43432 1585 aaKnown RBP23.72■■□□□ 1.39
PMFBP1-208ENST00000537792 AQRO60306 1485 aaKnown RBP eCLIP23.71■■□□□ 1.39
PMFBP1-208ENST00000537792 GAPVD1Q14C86 1478 aa23.69■■□□□ 1.38
PMFBP1-208ENST00000537792 KIF27Q86VH2 1401 aa23.67■■□□□ 1.38
PMFBP1-208ENST00000537792 ABCA5Q8WWZ7 1642 aa23.67■■□□□ 1.38
PMFBP1-208ENST00000537792 GRIN2BQ13224 1484 aa23.66■■□□□ 1.38
PMFBP1-208ENST00000537792 ERICH3Q5RHP9 1530 aa23.59■■□□□ 1.37
PMFBP1-208ENST00000537792 MAGI1Q96QZ7 1491 aaPredicted RBP23.58■■□□□ 1.37
PMFBP1-208ENST00000537792 PBRM1Q86U86 1689 aa23.54■■□□□ 1.36
PMFBP1-208ENST00000537792 SNAPC4Q5SXM2 1469 aa23.52■■□□□ 1.36
PMFBP1-208ENST00000537792 EEA1Q15075 1411 aa23.51■■□□□ 1.35
PMFBP1-208ENST00000537792 IGF1RP08069 1367 aa23.48■■□□□ 1.35
PMFBP1-208ENST00000537792 FHAD1B1AJZ9 1412 aa23.46■■□□□ 1.35
PMFBP1-208ENST00000537792 SYNJ2O15056 1496 aa23.46■■□□□ 1.35
PMFBP1-208ENST00000537792 CHMP7Q8WUX9 453 aaPredicted RBP23.42■■□□□ 1.34
PMFBP1-208ENST00000537792 ADAMTS12P58397 1594 aa23.42■■□□□ 1.34
PMFBP1-208ENST00000537792 CUL7Q14999 1698 aa23.41■■□□□ 1.34
PMFBP1-208ENST00000537792 RUSC2Q8N2Y8 1516 aa23.39■■□□□ 1.34
PMFBP1-208ENST00000537792 CARMIL1Q5VZK9 1371 aa23.38■■□□□ 1.33
PMFBP1-208ENST00000537792 FBLN2P98095 1184 aa23.37■■□□□ 1.33
PMFBP1-208ENST00000537792 OSCARQ8IYS5 282 aa23.35■■□□□ 1.33
PMFBP1-208ENST00000537792 CSRNP3Q8WYN3 585 aa23.35■■□□□ 1.33
PMFBP1-208ENST00000537792 GRIN2AQ12879 1464 aa23.33■■□□□ 1.33
PMFBP1-208ENST00000537792 CHD1O14646 1710 aa23.3■■□□□ 1.32
PMFBP1-208ENST00000537792 RAPGEF2Q9Y4G8 1499 aa23.28■■□□□ 1.32
PMFBP1-208ENST00000537792 PRXQ9BXM0 1461 aa23.27■■□□□ 1.32
PMFBP1-208ENST00000537792 NUP160Q12769 1436 aa23.24■■□□□ 1.31
PMFBP1-208ENST00000537792 FAM9AQ8IZU1 332 aaPredicted RBP23.21■■□□□ 1.31
PMFBP1-208ENST00000537792 KIF21BO75037 1637 aa23.14■■□□□ 1.29
PMFBP1-208ENST00000537792 CEP170Q5SW79 1584 aa23.14■■□□□ 1.29
PMFBP1-208ENST00000537792 CLASP1Q7Z460 1538 aa23.13■■□□□ 1.29
PMFBP1-208ENST00000537792 KIAA0586Q9BVV6 1533 aa23.12■■□□□ 1.29
PMFBP1-208ENST00000537792 DNAJC5Q9H3Z4 198 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms