RNA–Protein interactions for RNA: ENST00000428119.1

RHBDD2-203, Transcript of rhomboid domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene RHBDD2, Length 1,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD2-203ENST00000428119 NISCHQ9Y2I1 1504 aa34.63■■■■□ 3.13
RHBDD2-203ENST00000428119 CCDC180Q9P1Z9 1646 aa31.04■■■□□ 2.56
RHBDD2-203ENST00000428119 ABCC9O60706 1549 aa30.18■■■□□ 2.42
RHBDD2-203ENST00000428119 RB1CC1Q8TDY2 1594 aa29.24■■■□□ 2.27
RHBDD2-203ENST00000428119 NACADO15069 1562 aa29.21■■■□□ 2.27
RHBDD2-203ENST00000428119 MYO15BQ96JP2 1530 aa29.1■■■□□ 2.25
RHBDD2-203ENST00000428119 DCAF1Q9Y4B6 1507 aa28.84■■■□□ 2.21
RHBDD2-203ENST00000428119 ZCCHC6Q5VYS8 1495 aaKnown RBP28.84■■■□□ 2.21
RHBDD2-203ENST00000428119 DCAF8L2P0C7V8 631 aa28.74■■■□□ 2.19
RHBDD2-203ENST00000428119 UNC13AQ9UPW8 1703 aa28.38■■■□□ 2.13
RHBDD2-203ENST00000428119 SHROOM4Q9ULL8 1493 aa28.29■■■□□ 2.12
RHBDD2-203ENST00000428119 BICRAQ9NZM4 1560 aa28.16■■■□□ 2.1
RHBDD2-203ENST00000428119 PABPN1Q86U42 306 aaKnown RBP eCLIP28.06■■■□□ 2.08
RHBDD2-203ENST00000428119 SCRIBQ14160 1630 aa28■■■□□ 2.07
RHBDD2-203ENST00000428119 DNAJC5BQ9UF47 199 aa27.7■■■□□ 2.02
RHBDD2-203ENST00000428119 EIF4G1Q04637 1599 aaKnown RBP27.51■■□□□ 1.99
RHBDD2-203ENST00000428119 CC2D2AQ9P2K1 1620 aa27.4■■□□□ 1.98
RHBDD2-203ENST00000428119 CECR2Q9BXF3 1484 aa27.26■■□□□ 1.95
RHBDD2-203ENST00000428119 BAZ1AQ9NRL2 1556 aaPredicted RBP26.95■■□□□ 1.9
RHBDD2-203ENST00000428119 SMARCA4P51532 1647 aa26.9■■□□□ 1.9
RHBDD2-203ENST00000428119 SMARCA2P51531 1590 aa26.89■■□□□ 1.9
RHBDD2-203ENST00000428119 NCAPD3P42695 1498 aa26.88■■□□□ 1.89
RHBDD2-203ENST00000428119 HMGXB3Q12766 1538 aa26.8■■□□□ 1.88
RHBDD2-203ENST00000428119 ATAD2BQ9ULI0 1458 aa26.79■■□□□ 1.88
RHBDD2-203ENST00000428119 PEG3Q9GZU2 1588 aa26.77■■□□□ 1.88
RHBDD2-203ENST00000428119 BAZ1BQ9UIG0 1483 aaKnown RBP26.59■■□□□ 1.85
RHBDD2-203ENST00000428119 MROH2BQ7Z745 1585 aa26.54■■□□□ 1.84
RHBDD2-203ENST00000428119 LAMC3Q9Y6N6 1575 aa26.24■■□□□ 1.79
RHBDD2-203ENST00000428119 WIZO95785 1651 aa26.24■■□□□ 1.79
RHBDD2-203ENST00000428119 RSF1Q96T23 1441 aaPredicted RBP26.23■■□□□ 1.79
RHBDD2-203ENST00000428119 ERCC6Q03468 1493 aa26.18■■□□□ 1.78
RHBDD2-203ENST00000428119 TOP2AP11388 1531 aaKnown RBP26.13■■□□□ 1.77
RHBDD2-203ENST00000428119 CUX2O14529 1486 aa26.11■■□□□ 1.77
RHBDD2-203ENST00000428119 PDS5BQ9NTI5 1447 aa26.08■■□□□ 1.77
RHBDD2-203ENST00000428119 CADPSQ9ULU8 1353 aa26.05■■□□□ 1.76
RHBDD2-203ENST00000428119 NESP48681 1621 aa26.01■■□□□ 1.75
RHBDD2-203ENST00000428119 CFTRP13569 1480 aa25.87■■□□□ 1.73
RHBDD2-203ENST00000428119 THOC2Q8NI27 1593 aaKnown RBP25.84■■□□□ 1.73
RHBDD2-203ENST00000428119 KIF21AQ7Z4S6 1674 aa25.81■■□□□ 1.72
RHBDD2-203ENST00000428119 DNAJC5Q9H3Z4 198 aa25.76■■□□□ 1.71
RHBDD2-203ENST00000428119 PRDM2Q13029 1718 aa25.75■■□□□ 1.71
RHBDD2-203ENST00000428119 CEP164Q9UPV0 1460 aa25.75■■□□□ 1.71
RHBDD2-203ENST00000428119 MRC2Q9UBG0 1479 aa25.74■■□□□ 1.71
RHBDD2-203ENST00000428119 FANCD2Q9BXW9 1451 aa25.71■■□□□ 1.71
RHBDD2-203ENST00000428119 CCDC88BA6NC98 1476 aa25.7■■□□□ 1.7
RHBDD2-203ENST00000428119 WDR62O43379 1518 aa25.68■■□□□ 1.7
RHBDD2-203ENST00000428119 ABCC8Q09428 1581 aa25.5■■□□□ 1.67
RHBDD2-203ENST00000428119 URB2Q14146 1524 aaKnown RBP25.38■■□□□ 1.65
RHBDD2-203ENST00000428119 DNMBPQ6XZF7 1577 aa25.3■■□□□ 1.64
RHBDD2-203ENST00000428119 TOPBP1Q92547 1522 aa25.27■■□□□ 1.64
RHBDD2-203ENST00000428119 SUPT5HO00267 1087 aaKnown RBP25.27■■□□□ 1.64
RHBDD2-203ENST00000428119 IFT140Q96RY7 1462 aa25.26■■□□□ 1.63
RHBDD2-203ENST00000428119 WDR97A6NE52 1622 aa25.09■■□□□ 1.61
RHBDD2-203ENST00000428119 POLA1P09884 1462 aaPredicted RBP25.03■■□□□ 1.6
RHBDD2-203ENST00000428119 TARBP1Q13395 1621 aaKnown RBP25■■□□□ 1.59
RHBDD2-203ENST00000428119 CUX1P39880 1505 aa24.95■■□□□ 1.58
RHBDD2-203ENST00000428119 EIF4G3O43432 1585 aaKnown RBP24.94■■□□□ 1.58
RHBDD2-203ENST00000428119 SOGA1O94964 1423 aa24.94■■□□□ 1.58
RHBDD2-203ENST00000428119 FGD5Q6ZNL6 1462 aa24.93■■□□□ 1.58
RHBDD2-203ENST00000428119 ZNF608Q9ULD9 1512 aaPredicted RBP24.91■■□□□ 1.58
RHBDD2-203ENST00000428119 OSCARQ8IYS5 282 aa24.87■■□□□ 1.57
RHBDD2-203ENST00000428119 WRNQ14191 1432 aaPredicted RBP eCLIP24.82■■□□□ 1.56
RHBDD2-203ENST00000428119 TOP2BQ02880 1626 aa24.82■■□□□ 1.56
RHBDD2-203ENST00000428119 BIVM-ERCC5R4GMW8 1640 aa24.82■■□□□ 1.56
RHBDD2-203ENST00000428119 RAD54L2Q9Y4B4 1467 aa24.79■■□□□ 1.56
RHBDD2-203ENST00000428119 ABCA10Q8WWZ4 1543 aa24.79■■□□□ 1.56
RHBDD2-203ENST00000428119 AQRO60306 1485 aaKnown RBP eCLIP24.77■■□□□ 1.56
RHBDD2-203ENST00000428119 MAGI1Q96QZ7 1491 aaPredicted RBP24.76■■□□□ 1.55
RHBDD2-203ENST00000428119 GRIN2BQ13224 1484 aa24.75■■□□□ 1.55
RHBDD2-203ENST00000428119 TDRD9Q8NDG6 1382 aaKnown RBP24.7■■□□□ 1.55
RHBDD2-203ENST00000428119 GAPVD1Q14C86 1478 aa24.67■■□□□ 1.54
RHBDD2-203ENST00000428119 ABCA5Q8WWZ7 1642 aa24.66■■□□□ 1.54
RHBDD2-203ENST00000428119 SYNJ1O43426 1573 aa24.65■■□□□ 1.54
RHBDD2-203ENST00000428119 CHD1O14646 1710 aa24.62■■□□□ 1.53
RHBDD2-203ENST00000428119 SNAPC4Q5SXM2 1469 aa24.62■■□□□ 1.53
RHBDD2-203ENST00000428119 PBRM1Q86U86 1689 aa24.62■■□□□ 1.53
RHBDD2-203ENST00000428119 SYNJ2O15056 1496 aa24.61■■□□□ 1.53
RHBDD2-203ENST00000428119 CHMP7Q8WUX9 453 aaPredicted RBP24.54■■□□□ 1.52
RHBDD2-203ENST00000428119 ERICH3Q5RHP9 1530 aa24.54■■□□□ 1.52
RHBDD2-203ENST00000428119 FBLN2P98095 1184 aa24.5■■□□□ 1.51
RHBDD2-203ENST00000428119 FHAD1B1AJZ9 1412 aa24.44■■□□□ 1.5
RHBDD2-203ENST00000428119 ADAMTS12P58397 1594 aa24.43■■□□□ 1.5
RHBDD2-203ENST00000428119 ARHGEF11O15085 1522 aa24.43■■□□□ 1.5
RHBDD2-203ENST00000428119 CLASP1Q7Z460 1538 aa24.42■■□□□ 1.5
RHBDD2-203ENST00000428119 RIMBP3CA6NJZ7 1639 aa24.42■■□□□ 1.5
RHBDD2-203ENST00000428119 RIMBP3BA6NNM3 1639 aa24.42■■□□□ 1.5
RHBDD2-203ENST00000428119 RIMBP3Q9UFD9 1639 aa24.42■■□□□ 1.5
RHBDD2-203ENST00000428119 GRIN2AQ12879 1464 aa24.38■■□□□ 1.49
RHBDD2-203ENST00000428119 KIF27Q86VH2 1401 aa24.38■■□□□ 1.49
RHBDD2-203ENST00000428119 TRIM41Q8WV44 630 aa24.36■■□□□ 1.49
RHBDD2-203ENST00000428119 CUL7Q14999 1698 aa24.3■■□□□ 1.48
RHBDD2-203ENST00000428119 NUP160Q12769 1436 aa24.3■■□□□ 1.48
RHBDD2-203ENST00000428119 IGF1RP08069 1367 aa24.18■■□□□ 1.46
RHBDD2-203ENST00000428119 CEP170Q5SW79 1584 aa24.18■■□□□ 1.46
RHBDD2-203ENST00000428119 ARAP1Q96P48 1450 aa24.18■■□□□ 1.46
RHBDD2-203ENST00000428119 SHROOM2Q13796 1616 aa24.16■■□□□ 1.46
RHBDD2-203ENST00000428119 CYB5RLQ6IPT4 315 aa24.1■■□□□ 1.45
RHBDD2-203ENST00000428119 RUSC2Q8N2Y8 1516 aa24.07■■□□□ 1.44
RHBDD2-203ENST00000428119 CARMIL1Q5VZK9 1371 aa24.06■■□□□ 1.44
RHBDD2-203ENST00000428119 KIAA0586Q9BVV6 1533 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms