RNA–Protein interactions for RNA: ENST00000618515.4

KIF3A-208, Transcript of kinesin family member 3A, humanhuman

TSL 5 BASIC

Gene KIF3A, Length 3,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-208ENST00000618515 NISCHQ9Y2I1 1504 aa26.3■■□□□ 1.8
KIF3A-208ENST00000618515 CCDC180Q9P1Z9 1646 aa22.44■■□□□ 1.18
KIF3A-208ENST00000618515 ZCCHC6Q5VYS8 1495 aaKnown RBP22.4■■□□□ 1.18
KIF3A-208ENST00000618515 SHROOM4Q9ULL8 1493 aa22.03■■□□□ 1.12
KIF3A-208ENST00000618515 HRCP23327 699 aa21.95■■□□□ 1.1
KIF3A-208ENST00000618515 DCAF1Q9Y4B6 1507 aa21.91■■□□□ 1.1
KIF3A-208ENST00000618515 MYO15BQ96JP2 1530 aa21.83■■□□□ 1.09
KIF3A-208ENST00000618515 SUPT5HO00267 1087 aaKnown RBP21.82■■□□□ 1.08
KIF3A-208ENST00000618515 CHIC1Q5VXU3 224 aa21.8■■□□□ 1.08
KIF3A-208ENST00000618515 ABCC9O60706 1549 aa21.74■■□□□ 1.07
KIF3A-208ENST00000618515 DCAF8L2P0C7V8 631 aa21.68■■□□□ 1.06
KIF3A-208ENST00000618515 PCGF6Q9BYE7 350 aa21.3■■□□□ 1
KIF3A-208ENST00000618515 TRIM26Q12899 539 aaPredicted RBP21.12■□□□□ 0.97
KIF3A-208ENST00000618515 ZEB1P37275 1124 aaPredicted RBP21.04■□□□□ 0.96
KIF3A-208ENST00000618515 PPARGC1BQ86YN6 1023 aaKnown RBP21■□□□□ 0.95
KIF3A-208ENST00000618515 PELP1Q8IZL8 1130 aaKnown RBP20.9■□□□□ 0.94
KIF3A-208ENST00000618515 RB1CC1Q8TDY2 1594 aa20.89■□□□□ 0.93
KIF3A-208ENST00000618515 LOC105371045A0A1W2PR82 267 aa20.88■□□□□ 0.93
KIF3A-208ENST00000618515 RSF1Q96T23 1441 aaPredicted RBP20.86■□□□□ 0.93
KIF3A-208ENST00000618515 NACADO15069 1562 aa20.71■□□□□ 0.91
KIF3A-208ENST00000618515 SCRIBQ14160 1630 aa20.6■□□□□ 0.89
KIF3A-208ENST00000618515 PABPN1Q86U42 306 aaKnown RBP eCLIP20.58■□□□□ 0.89
KIF3A-208ENST00000618515 TRIM41Q8WV44 630 aa20.52■□□□□ 0.87
KIF3A-208ENST00000618515 EIF4G1Q04637 1599 aaKnown RBP20.48■□□□□ 0.87
KIF3A-208ENST00000618515 BAZ1AQ9NRL2 1556 aaPredicted RBP20.39■□□□□ 0.85
KIF3A-208ENST00000618515 SCAF1Q9H7N4 1312 aaKnown RBP20.35■□□□□ 0.85
KIF3A-208ENST00000618515 MROH2BQ7Z745 1585 aa20.32■□□□□ 0.84
KIF3A-208ENST00000618515 WRNQ14191 1432 aaPredicted RBP eCLIP20.31■□□□□ 0.84
KIF3A-208ENST00000618515 WIZO95785 1651 aa20.24■□□□□ 0.83
KIF3A-208ENST00000618515 CECR2Q9BXF3 1484 aa20.24■□□□□ 0.83
KIF3A-208ENST00000618515 UNC13AQ9UPW8 1703 aa20.19■□□□□ 0.82
KIF3A-208ENST00000618515 ACIN1Q9UKV3 1341 aaKnown RBP20.13■□□□□ 0.81
KIF3A-208ENST00000618515 TOP2AP11388 1531 aaKnown RBP20.12■□□□□ 0.81
KIF3A-208ENST00000618515 MYT1Q01538 1121 aa20.12■□□□□ 0.81
KIF3A-208ENST00000618515 BICRAQ9NZM4 1560 aa20.08■□□□□ 0.81
KIF3A-208ENST00000618515 EEA1Q15075 1411 aa20.08■□□□□ 0.8
KIF3A-208ENST00000618515 FAM9AQ8IZU1 332 aaPredicted RBP20.02■□□□□ 0.8
KIF3A-208ENST00000618515 TNIKQ9UKE5 1360 aa20■□□□□ 0.79
KIF3A-208ENST00000618515 SMARCA2P51531 1590 aa19.96■□□□□ 0.79
KIF3A-208ENST00000618515 SMARCA4P51532 1647 aa19.95■□□□□ 0.78
KIF3A-208ENST00000618515 CENPBP07199 599 aaPredicted RBP19.94■□□□□ 0.78
KIF3A-208ENST00000618515 CEP162Q5TB80 1403 aa19.92■□□□□ 0.78
KIF3A-208ENST00000618515 CCER1Q8TC90 406 aaPredicted RBP19.91■□□□□ 0.78
KIF3A-208ENST00000618515 NEUROD1Q13562 356 aa19.9■□□□□ 0.78
KIF3A-208ENST00000618515 DIEXFQ68CQ4 756 aaKnown RBP19.88■□□□□ 0.77
KIF3A-208ENST00000618515 CCDC88BA6NC98 1476 aa19.87■□□□□ 0.77
KIF3A-208ENST00000618515 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.85■□□□□ 0.77
KIF3A-208ENST00000618515 ABCC8Q09428 1581 aa19.81■□□□□ 0.76
KIF3A-208ENST00000618515 KIF21BO75037 1637 aa19.79■□□□□ 0.76
KIF3A-208ENST00000618515 GOLGA3Q08378 1498 aa19.78■□□□□ 0.76
KIF3A-208ENST00000618515 PEG3Q9GZU2 1588 aa19.78■□□□□ 0.76
KIF3A-208ENST00000618515 ZNF316A6NFI3 1004 aaPredicted RBP19.73■□□□□ 0.75
KIF3A-208ENST00000618515 GTF3C3Q9Y5Q9 886 aa19.73■□□□□ 0.75
KIF3A-208ENST00000618515 DNAJC5BQ9UF47 199 aa19.71■□□□□ 0.75
KIF3A-208ENST00000618515 SOGA1O94964 1423 aa19.7■□□□□ 0.74
KIF3A-208ENST00000618515 BAZ1BQ9UIG0 1483 aaKnown RBP19.67■□□□□ 0.74
KIF3A-208ENST00000618515 CSRNP3Q8WYN3 585 aa19.66■□□□□ 0.74
KIF3A-208ENST00000618515 CEP164Q9UPV0 1460 aa19.65■□□□□ 0.74
KIF3A-208ENST00000618515 CLSPNQ9HAW4 1339 aa19.57■□□□□ 0.72
KIF3A-208ENST00000618515 RUSC2Q8N2Y8 1516 aa19.56■□□□□ 0.72
KIF3A-208ENST00000618515 EHMT2Q96KQ7 1210 aa19.55■□□□□ 0.72
KIF3A-208ENST00000618515 VPS8Q8N3P4 1428 aa19.53■□□□□ 0.72
KIF3A-208ENST00000618515 SYNJ1O43426 1573 aa19.49■□□□□ 0.71
KIF3A-208ENST00000618515 CC2D2AQ9P2K1 1620 aa19.45■□□□□ 0.7
KIF3A-208ENST00000618515 CLIP1P30622 1438 aa19.44■□□□□ 0.7
KIF3A-208ENST00000618515 ERICH3Q5RHP9 1530 aa19.41■□□□□ 0.7
KIF3A-208ENST00000618515 BIVM-ERCC5R4GMW8 1640 aa19.38■□□□□ 0.69
KIF3A-208ENST00000618515 UBTFP17480 764 aaKnown RBP19.37■□□□□ 0.69
KIF3A-208ENST00000618515 TOP2BQ02880 1626 aa19.37■□□□□ 0.69
KIF3A-208ENST00000618515 CUX2O14529 1486 aa19.36■□□□□ 0.69
KIF3A-208ENST00000618515 ATAD2BQ9ULI0 1458 aa19.35■□□□□ 0.69
KIF3A-208ENST00000618515 MIER1Q8N108 512 aa19.34■□□□□ 0.69
KIF3A-208ENST00000618515 RAPGEF2Q9Y4G8 1499 aa19.26■□□□□ 0.67
KIF3A-208ENST00000618515 RRBP1Q9P2E9 1410 aaKnown RBP19.24■□□□□ 0.67
KIF3A-208ENST00000618515 PRXQ9BXM0 1461 aa19.24■□□□□ 0.67
KIF3A-208ENST00000618515 DHX57Q6P158 1386 aaKnown RBP19.23■□□□□ 0.67
KIF3A-208ENST00000618515 NCAPD3P42695 1498 aa19.19■□□□□ 0.66
KIF3A-208ENST00000618515 ARAP1Q96P48 1450 aa19.19■□□□□ 0.66
KIF3A-208ENST00000618515 MAP3K1Q13233 1512 aa19.14■□□□□ 0.65
KIF3A-208ENST00000618515 APLP2Q06481 763 aa19.13■□□□□ 0.65
KIF3A-208ENST00000618515 HNRNPUL2Q1KMD3 747 aaKnown RBP19.13■□□□□ 0.65
KIF3A-208ENST00000618515 TTBK1Q5TCY1 1321 aaPredicted RBP19.11■□□□□ 0.65
KIF3A-208ENST00000618515 YTHDC1Q96MU7 727 aaKnown RBP19.08■□□□□ 0.64
KIF3A-208ENST00000618515 HMGXB3Q12766 1538 aa19.04■□□□□ 0.64
KIF3A-208ENST00000618515 SUPT16HQ9Y5B9 1047 aaKnown RBP19.02■□□□□ 0.64
KIF3A-208ENST00000618515 PRDM2Q13029 1718 aa19■□□□□ 0.63
KIF3A-208ENST00000618515 CCNB3Q8WWL7 1395 aa18.94■□□□□ 0.62
KIF3A-208ENST00000618515 CUX1P39880 1505 aa18.93■□□□□ 0.62
KIF3A-208ENST00000618515 KIF27Q86VH2 1401 aa18.93■□□□□ 0.62
KIF3A-208ENST00000618515 MAPKBP1O60336 1514 aa18.93■□□□□ 0.62
KIF3A-208ENST00000618515 ARHGAP35Q9NRY4 1499 aa18.92■□□□□ 0.62
KIF3A-208ENST00000618515 TIAM1Q13009 1591 aa18.89■□□□□ 0.61
KIF3A-208ENST00000618515 NESP48681 1621 aa18.89■□□□□ 0.61
KIF3A-208ENST00000618515 TIMELESSQ9UNS1 1208 aa18.88■□□□□ 0.61
KIF3A-208ENST00000618515 CFAP43Q8NDM7 1665 aa18.86■□□□□ 0.61
KIF3A-208ENST00000618515 KANK4Q5T7N3 995 aaPredicted RBP18.85■□□□□ 0.61
KIF3A-208ENST00000618515 TSHZ2Q9NRE2 1034 aa18.84■□□□□ 0.61
KIF3A-208ENST00000618515 CFTRP13569 1480 aa18.83■□□□□ 0.61
KIF3A-208ENST00000618515 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.81■□□□□ 0.6
KIF3A-208ENST00000618515 CADPSQ9ULU8 1353 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms