RNA–Protein interactions for RNA: ENST00000443196.1

UPK1A-AS1-201, UPK1A antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene UPK1A-AS1, Length 795 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-AS1-201ENST00000443196 NISCHQ9Y2I1 1504 aa34.18■■■■□ 3.06
UPK1A-AS1-201ENST00000443196 CCDC180Q9P1Z9 1646 aa30.28■■■□□ 2.44
UPK1A-AS1-201ENST00000443196 ABCC9O60706 1549 aa29.58■■■□□ 2.33
UPK1A-AS1-201ENST00000443196 DCAF8L2P0C7V8 631 aa28.57■■■□□ 2.16
UPK1A-AS1-201ENST00000443196 ZCCHC6Q5VYS8 1495 aaKnown RBP28.49■■■□□ 2.15
UPK1A-AS1-201ENST00000443196 NACADO15069 1562 aa28.48■■■□□ 2.15
UPK1A-AS1-201ENST00000443196 RB1CC1Q8TDY2 1594 aa28.47■■■□□ 2.15
UPK1A-AS1-201ENST00000443196 MYO15BQ96JP2 1530 aa28.35■■■□□ 2.13
UPK1A-AS1-201ENST00000443196 DCAF1Q9Y4B6 1507 aa28.28■■■□□ 2.12
UPK1A-AS1-201ENST00000443196 UNC13AQ9UPW8 1703 aa27.76■■■□□ 2.03
UPK1A-AS1-201ENST00000443196 PABPN1Q86U42 306 aaKnown RBP eCLIP27.7■■■□□ 2.02
UPK1A-AS1-201ENST00000443196 SCRIBQ14160 1630 aa27.67■■■□□ 2.02
UPK1A-AS1-201ENST00000443196 BICRAQ9NZM4 1560 aa27.6■■■□□ 2.01
UPK1A-AS1-201ENST00000443196 DNAJC5BQ9UF47 199 aa27.41■■□□□ 1.98
UPK1A-AS1-201ENST00000443196 SHROOM4Q9ULL8 1493 aa27.33■■□□□ 1.97
UPK1A-AS1-201ENST00000443196 EIF4G1Q04637 1599 aaKnown RBP26.88■■□□□ 1.89
UPK1A-AS1-201ENST00000443196 CC2D2AQ9P2K1 1620 aa26.73■■□□□ 1.87
UPK1A-AS1-201ENST00000443196 CECR2Q9BXF3 1484 aa26.63■■□□□ 1.85
UPK1A-AS1-201ENST00000443196 SMARCA4P51532 1647 aa26.47■■□□□ 1.83
UPK1A-AS1-201ENST00000443196 BAZ1AQ9NRL2 1556 aaPredicted RBP26.47■■□□□ 1.83
UPK1A-AS1-201ENST00000443196 MROH2BQ7Z745 1585 aa26.35■■□□□ 1.81
UPK1A-AS1-201ENST00000443196 ATAD2BQ9ULI0 1458 aa26.33■■□□□ 1.81
UPK1A-AS1-201ENST00000443196 NCAPD3P42695 1498 aa26.3■■□□□ 1.8
UPK1A-AS1-201ENST00000443196 SMARCA2P51531 1590 aa26.29■■□□□ 1.8
UPK1A-AS1-201ENST00000443196 PEG3Q9GZU2 1588 aa26.21■■□□□ 1.79
UPK1A-AS1-201ENST00000443196 HMGXB3Q12766 1538 aa26.14■■□□□ 1.78
UPK1A-AS1-201ENST00000443196 BAZ1BQ9UIG0 1483 aaKnown RBP26.11■■□□□ 1.77
UPK1A-AS1-201ENST00000443196 RSF1Q96T23 1441 aaPredicted RBP26.11■■□□□ 1.77
UPK1A-AS1-201ENST00000443196 WIZO95785 1651 aa26.04■■□□□ 1.76
UPK1A-AS1-201ENST00000443196 TOP2AP11388 1531 aaKnown RBP25.78■■□□□ 1.72
UPK1A-AS1-201ENST00000443196 DNAJC5Q9H3Z4 198 aa25.64■■□□□ 1.7
UPK1A-AS1-201ENST00000443196 NESP48681 1621 aa25.63■■□□□ 1.69
UPK1A-AS1-201ENST00000443196 SUPT5HO00267 1087 aaKnown RBP25.57■■□□□ 1.68
UPK1A-AS1-201ENST00000443196 LAMC3Q9Y6N6 1575 aa25.56■■□□□ 1.68
UPK1A-AS1-201ENST00000443196 CADPSQ9ULU8 1353 aa25.56■■□□□ 1.68
UPK1A-AS1-201ENST00000443196 CCDC88BA6NC98 1476 aa25.51■■□□□ 1.67
UPK1A-AS1-201ENST00000443196 ERCC6Q03468 1493 aa25.47■■□□□ 1.67
UPK1A-AS1-201ENST00000443196 CFTRP13569 1480 aa25.41■■□□□ 1.66
UPK1A-AS1-201ENST00000443196 PDS5BQ9NTI5 1447 aa25.41■■□□□ 1.66
UPK1A-AS1-201ENST00000443196 KIF21AQ7Z4S6 1674 aa25.26■■□□□ 1.63
UPK1A-AS1-201ENST00000443196 FANCD2Q9BXW9 1451 aa25.25■■□□□ 1.63
UPK1A-AS1-201ENST00000443196 CEP164Q9UPV0 1460 aa25.2■■□□□ 1.62
UPK1A-AS1-201ENST00000443196 THOC2Q8NI27 1593 aaKnown RBP25.17■■□□□ 1.62
UPK1A-AS1-201ENST00000443196 CUX2O14529 1486 aa25.15■■□□□ 1.62
UPK1A-AS1-201ENST00000443196 MRC2Q9UBG0 1479 aa25.14■■□□□ 1.61
UPK1A-AS1-201ENST00000443196 PRDM2Q13029 1718 aa25.12■■□□□ 1.61
UPK1A-AS1-201ENST00000443196 WDR62O43379 1518 aa25.03■■□□□ 1.6
UPK1A-AS1-201ENST00000443196 URB2Q14146 1524 aaKnown RBP24.98■■□□□ 1.59
UPK1A-AS1-201ENST00000443196 ABCC8Q09428 1581 aa24.86■■□□□ 1.57
UPK1A-AS1-201ENST00000443196 TOPBP1Q92547 1522 aa24.85■■□□□ 1.57
UPK1A-AS1-201ENST00000443196 DNMBPQ6XZF7 1577 aa24.81■■□□□ 1.56
UPK1A-AS1-201ENST00000443196 CUX1P39880 1505 aa24.71■■□□□ 1.55
UPK1A-AS1-201ENST00000443196 IFT140Q96RY7 1462 aa24.67■■□□□ 1.54
UPK1A-AS1-201ENST00000443196 POLA1P09884 1462 aaPredicted RBP24.64■■□□□ 1.54
UPK1A-AS1-201ENST00000443196 FGD5Q6ZNL6 1462 aa24.61■■□□□ 1.53
UPK1A-AS1-201ENST00000443196 WRNQ14191 1432 aaPredicted RBP eCLIP24.61■■□□□ 1.53
UPK1A-AS1-201ENST00000443196 SOGA1O94964 1423 aa24.57■■□□□ 1.52
UPK1A-AS1-201ENST00000443196 TARBP1Q13395 1621 aaKnown RBP24.55■■□□□ 1.52
UPK1A-AS1-201ENST00000443196 RAD54L2Q9Y4B4 1467 aa24.55■■□□□ 1.52
UPK1A-AS1-201ENST00000443196 ZNF608Q9ULD9 1512 aaPredicted RBP24.55■■□□□ 1.52
UPK1A-AS1-201ENST00000443196 SYNJ1O43426 1573 aa24.51■■□□□ 1.51
UPK1A-AS1-201ENST00000443196 TOP2BQ02880 1626 aa24.5■■□□□ 1.51
UPK1A-AS1-201ENST00000443196 BIVM-ERCC5R4GMW8 1640 aa24.49■■□□□ 1.51
UPK1A-AS1-201ENST00000443196 AQRO60306 1485 aaKnown RBP eCLIP24.44■■□□□ 1.5
UPK1A-AS1-201ENST00000443196 TDRD9Q8NDG6 1382 aaKnown RBP24.43■■□□□ 1.5
UPK1A-AS1-201ENST00000443196 EIF4G3O43432 1585 aaKnown RBP24.42■■□□□ 1.5
UPK1A-AS1-201ENST00000443196 ABCA10Q8WWZ4 1543 aa24.37■■□□□ 1.49
UPK1A-AS1-201ENST00000443196 WDR97A6NE52 1622 aa24.35■■□□□ 1.49
UPK1A-AS1-201ENST00000443196 GAPVD1Q14C86 1478 aa24.27■■□□□ 1.48
UPK1A-AS1-201ENST00000443196 GRIN2BQ13224 1484 aa24.26■■□□□ 1.47
UPK1A-AS1-201ENST00000443196 ABCA5Q8WWZ7 1642 aa24.24■■□□□ 1.47
UPK1A-AS1-201ENST00000443196 SNAPC4Q5SXM2 1469 aa24.2■■□□□ 1.47
UPK1A-AS1-201ENST00000443196 OSCARQ8IYS5 282 aa24.19■■□□□ 1.46
UPK1A-AS1-201ENST00000443196 TRIM41Q8WV44 630 aa24.18■■□□□ 1.46
UPK1A-AS1-201ENST00000443196 MAGI1Q96QZ7 1491 aaPredicted RBP24.17■■□□□ 1.46
UPK1A-AS1-201ENST00000443196 FBLN2P98095 1184 aa24.15■■□□□ 1.46
UPK1A-AS1-201ENST00000443196 PBRM1Q86U86 1689 aa24.15■■□□□ 1.46
UPK1A-AS1-201ENST00000443196 CHMP7Q8WUX9 453 aaPredicted RBP24.1■■□□□ 1.45
UPK1A-AS1-201ENST00000443196 KIF27Q86VH2 1401 aa24.1■■□□□ 1.45
UPK1A-AS1-201ENST00000443196 SYNJ2O15056 1496 aa24.08■■□□□ 1.45
UPK1A-AS1-201ENST00000443196 ERICH3Q5RHP9 1530 aa24.08■■□□□ 1.45
UPK1A-AS1-201ENST00000443196 CHD1O14646 1710 aa24.06■■□□□ 1.44
UPK1A-AS1-201ENST00000443196 FHAD1B1AJZ9 1412 aa24.01■■□□□ 1.43
UPK1A-AS1-201ENST00000443196 ADAMTS12P58397 1594 aa23.99■■□□□ 1.43
UPK1A-AS1-201ENST00000443196 IGF1RP08069 1367 aa23.99■■□□□ 1.43
UPK1A-AS1-201ENST00000443196 GRIN2AQ12879 1464 aa23.94■■□□□ 1.42
UPK1A-AS1-201ENST00000443196 CHIC1Q5VXU3 224 aa23.93■■□□□ 1.42
UPK1A-AS1-201ENST00000443196 RUSC2Q8N2Y8 1516 aa23.91■■□□□ 1.42
UPK1A-AS1-201ENST00000443196 CUL7Q14999 1698 aa23.86■■□□□ 1.41
UPK1A-AS1-201ENST00000443196 CARMIL1Q5VZK9 1371 aa23.85■■□□□ 1.41
UPK1A-AS1-201ENST00000443196 CLASP1Q7Z460 1538 aa23.84■■□□□ 1.41
UPK1A-AS1-201ENST00000443196 NUP160Q12769 1436 aa23.84■■□□□ 1.41
UPK1A-AS1-201ENST00000443196 CEP170Q5SW79 1584 aa23.79■■□□□ 1.4
UPK1A-AS1-201ENST00000443196 ARHGEF11O15085 1522 aa23.74■■□□□ 1.39
UPK1A-AS1-201ENST00000443196 RIMBP3CA6NJZ7 1639 aa23.72■■□□□ 1.39
UPK1A-AS1-201ENST00000443196 RIMBP3BA6NNM3 1639 aa23.72■■□□□ 1.39
UPK1A-AS1-201ENST00000443196 RIMBP3Q9UFD9 1639 aa23.72■■□□□ 1.39
UPK1A-AS1-201ENST00000443196 RAPGEF2Q9Y4G8 1499 aa23.7■■□□□ 1.38
UPK1A-AS1-201ENST00000443196 EEA1Q15075 1411 aa23.7■■□□□ 1.38
UPK1A-AS1-201ENST00000443196 CSRNP3Q8WYN3 585 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms