RNA–Protein interactions for RNA: ENST00000318003.11

CC2D1A-201, Transcript of coiled-coil and C2 domain containing 1A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CC2D1A, Length 3,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CC2D1A-201ENST00000318003 NISCHQ9Y2I1 1504 aa26.82■■□□□ 1.88
CC2D1A-201ENST00000318003 SHROOM4Q9ULL8 1493 aa24.14■■□□□ 1.46
CC2D1A-201ENST00000318003 DCAF8L2P0C7V8 631 aa24.03■■□□□ 1.44
CC2D1A-201ENST00000318003 SUPT5HO00267 1087 aaKnown RBP23.91■■□□□ 1.42
CC2D1A-201ENST00000318003 CCDC180Q9P1Z9 1646 aa23.17■■□□□ 1.3
CC2D1A-201ENST00000318003 CHIC1Q5VXU3 224 aa22.61■■□□□ 1.21
CC2D1A-201ENST00000318003 PCGF6Q9BYE7 350 aa22.55■■□□□ 1.2
CC2D1A-201ENST00000318003 ZCCHC6Q5VYS8 1495 aaKnown RBP22.55■■□□□ 1.2
CC2D1A-201ENST00000318003 EHMT2Q96KQ7 1210 aa22.46■■□□□ 1.19
CC2D1A-201ENST00000318003 LOC105371045A0A1W2PR82 267 aa22.3■■□□□ 1.16
CC2D1A-201ENST00000318003 FAM9AQ8IZU1 332 aaPredicted RBP22.29■■□□□ 1.16
CC2D1A-201ENST00000318003 MYO15BQ96JP2 1530 aa22.12■■□□□ 1.13
CC2D1A-201ENST00000318003 HRCP23327 699 aa22.11■■□□□ 1.13
CC2D1A-201ENST00000318003 TRIM41Q8WV44 630 aa22.05■■□□□ 1.12
CC2D1A-201ENST00000318003 PPARGC1BQ86YN6 1023 aaKnown RBP21.97■■□□□ 1.11
CC2D1A-201ENST00000318003 DCAF1Q9Y4B6 1507 aa21.9■■□□□ 1.1
CC2D1A-201ENST00000318003 ABCC9O60706 1549 aa21.74■■□□□ 1.07
CC2D1A-201ENST00000318003 TRIM26Q12899 539 aaPredicted RBP21.73■■□□□ 1.07
CC2D1A-201ENST00000318003 TTBK1Q5TCY1 1321 aaPredicted RBP21.69■■□□□ 1.06
CC2D1A-201ENST00000318003 SCRIBQ14160 1630 aa21.67■■□□□ 1.06
CC2D1A-201ENST00000318003 RSF1Q96T23 1441 aaPredicted RBP21.45■■□□□ 1.02
CC2D1A-201ENST00000318003 NACADO15069 1562 aa21.45■■□□□ 1.02
CC2D1A-201ENST00000318003 ZEB1P37275 1124 aaPredicted RBP21.35■■□□□ 1.01
CC2D1A-201ENST00000318003 PELP1Q8IZL8 1130 aaKnown RBP21.3■■□□□ 1
CC2D1A-201ENST00000318003 CCER1Q8TC90 406 aaPredicted RBP21.29■■□□□ 1
CC2D1A-201ENST00000318003 UBTFP17480 764 aaKnown RBP21.25■□□□□ 0.99
CC2D1A-201ENST00000318003 RB1CC1Q8TDY2 1594 aa21.24■□□□□ 0.99
CC2D1A-201ENST00000318003 RANGAP1P46060 587 aaPredicted RBP21.23■□□□□ 0.99
CC2D1A-201ENST00000318003 CECR2Q9BXF3 1484 aa21.19■□□□□ 0.98
CC2D1A-201ENST00000318003 PABPN1Q86U42 306 aaKnown RBP eCLIP21.18■□□□□ 0.982e-6■■■■□ 20.2
CC2D1A-201ENST00000318003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.17■□□□□ 0.98
CC2D1A-201ENST00000318003 UNC13AQ9UPW8 1703 aa21.02■□□□□ 0.96
CC2D1A-201ENST00000318003 MROH2BQ7Z745 1585 aa20.98■□□□□ 0.95
CC2D1A-201ENST00000318003 APLP2Q06481 763 aa20.97■□□□□ 0.95
CC2D1A-201ENST00000318003 HNRNPUL2Q1KMD3 747 aaKnown RBP20.83■□□□□ 0.92
CC2D1A-201ENST00000318003 WIZO95785 1651 aa20.8■□□□□ 0.92
CC2D1A-201ENST00000318003 CSRNP3Q8WYN3 585 aa20.78■□□□□ 0.92
CC2D1A-201ENST00000318003 SCAF1Q9H7N4 1312 aaKnown RBP20.7■□□□□ 0.9
CC2D1A-201ENST00000318003 BICRAQ9NZM4 1560 aa20.7■□□□□ 0.9
CC2D1A-201ENST00000318003 YTHDC1Q96MU7 727 aaKnown RBP20.69■□□□□ 0.9
CC2D1A-201ENST00000318003 DIEXFQ68CQ4 756 aaKnown RBP20.66■□□□□ 0.9
CC2D1A-201ENST00000318003 BAZ1AQ9NRL2 1556 aaPredicted RBP20.65■□□□□ 0.9
CC2D1A-201ENST00000318003 ABCC8Q09428 1581 aa20.63■□□□□ 0.89
CC2D1A-201ENST00000318003 CENPBP07199 599 aaPredicted RBP20.62■□□□□ 0.89
CC2D1A-201ENST00000318003 SOGA1O94964 1423 aa20.58■□□□□ 0.89
CC2D1A-201ENST00000318003 CCDC88BA6NC98 1476 aa20.58■□□□□ 0.88
CC2D1A-201ENST00000318003 CEP162Q5TB80 1403 aa20.55■□□□□ 0.88
CC2D1A-201ENST00000318003 MYT1Q01538 1121 aa20.53■□□□□ 0.88
CC2D1A-201ENST00000318003 ITGAEP38570 1179 aa20.49■□□□□ 0.87
CC2D1A-201ENST00000318003 ATP1B4Q9UN42 357 aaPredicted RBP20.46■□□□□ 0.87
CC2D1A-201ENST00000318003 WRNQ14191 1432 aaPredicted RBP eCLIP20.39■□□□□ 0.86
CC2D1A-201ENST00000318003 TNIKQ9UKE5 1360 aa20.38■□□□□ 0.85
CC2D1A-201ENST00000318003 RUSC2Q8N2Y8 1516 aa20.38■□□□□ 0.85
CC2D1A-201ENST00000318003 TOP2AP11388 1531 aaKnown RBP20.37■□□□□ 0.85
CC2D1A-201ENST00000318003 GTF3C3Q9Y5Q9 886 aa20.35■□□□□ 0.85
CC2D1A-201ENST00000318003 NEUROD1Q13562 356 aa20.35■□□□□ 0.85
CC2D1A-201ENST00000318003 ACIN1Q9UKV3 1341 aaKnown RBP20.34■□□□□ 0.85
CC2D1A-201ENST00000318003 ZNF316A6NFI3 1004 aaPredicted RBP20.34■□□□□ 0.85
CC2D1A-201ENST00000318003 SMARCA4P51532 1647 aa20.32■□□□□ 0.84
CC2D1A-201ENST00000318003 GOLGA3Q08378 1498 aa20.3■□□□□ 0.84
CC2D1A-201ENST00000318003 CLIP1P30622 1438 aa20.29■□□□□ 0.84
CC2D1A-201ENST00000318003 EEA1Q15075 1411 aa20.28■□□□□ 0.84
CC2D1A-201ENST00000318003 SMARCA2P51531 1590 aa20.24■□□□□ 0.83
CC2D1A-201ENST00000318003 BAZ1BQ9UIG0 1483 aaKnown RBP20.21■□□□□ 0.83
CC2D1A-201ENST00000318003 PEG3Q9GZU2 1588 aa20.15■□□□□ 0.82
CC2D1A-201ENST00000318003 CEP164Q9UPV0 1460 aa20.14■□□□□ 0.81
CC2D1A-201ENST00000318003 P3H3Q8IVL6 736 aa20.1■□□□□ 0.81
CC2D1A-201ENST00000318003 MIER1Q8N108 512 aa20.09■□□□□ 0.81
CC2D1A-201ENST00000318003 FAM50AQ14320 339 aaKnown RBP20.05■□□□□ 0.8
CC2D1A-201ENST00000318003 ATAD2BQ9ULI0 1458 aa20.01■□□□□ 0.79
CC2D1A-201ENST00000318003 RAPGEF2Q9Y4G8 1499 aa20■□□□□ 0.79
CC2D1A-201ENST00000318003 EIF4G1Q04637 1599 aaKnown RBP19.98■□□□□ 0.79
CC2D1A-201ENST00000318003 VPS8Q8N3P4 1428 aa19.97■□□□□ 0.79
CC2D1A-201ENST00000318003 KANK4Q5T7N3 995 aaPredicted RBP19.94■□□□□ 0.78
CC2D1A-201ENST00000318003 SYNJ1O43426 1573 aa19.88■□□□□ 0.77
CC2D1A-201ENST00000318003 KIF27Q86VH2 1401 aa19.83■□□□□ 0.76
CC2D1A-201ENST00000318003 HMGXB3Q12766 1538 aa19.8■□□□□ 0.76
CC2D1A-201ENST00000318003 NCAPD3P42695 1498 aa19.74■□□□□ 0.75
CC2D1A-201ENST00000318003 HIRIP3Q9BW71 556 aaPredicted RBP19.71■□□□□ 0.75
CC2D1A-201ENST00000318003 CC2D2AQ9P2K1 1620 aa19.69■□□□□ 0.74
CC2D1A-201ENST00000318003 ARID3CA6NKF2 412 aa19.69■□□□□ 0.74
CC2D1A-201ENST00000318003 CUX2O14529 1486 aa19.69■□□□□ 0.74
CC2D1A-201ENST00000318003 KIF21BO75037 1637 aa19.67■□□□□ 0.74
CC2D1A-201ENST00000318003 BCANQ96GW7 911 aa19.67■□□□□ 0.74
CC2D1A-201ENST00000318003 DDX10Q13206 875 aaKnown RBP19.66■□□□□ 0.74
CC2D1A-201ENST00000318003 CCNB3Q8WWL7 1395 aa19.65■□□□□ 0.74
CC2D1A-201ENST00000318003 SIN3AQ96ST3 1273 aa19.63■□□□□ 0.73
CC2D1A-201ENST00000318003 CARMIL1Q5VZK9 1371 aa19.6■□□□□ 0.73
CC2D1A-201ENST00000318003 DHX57Q6P158 1386 aaKnown RBP19.6■□□□□ 0.73
CC2D1A-201ENST00000318003 NEFLP07196 543 aa19.58■□□□□ 0.72
CC2D1A-201ENST00000318003 CNGB1Q14028 1251 aaPredicted RBP19.56■□□□□ 0.72
CC2D1A-201ENST00000318003 TRIM52Q96A61 297 aa19.56■□□□□ 0.72
CC2D1A-201ENST00000318003 CLSPNQ9HAW4 1339 aa19.55■□□□□ 0.72
CC2D1A-201ENST00000318003 ARAP1Q96P48 1450 aa19.55■□□□□ 0.72
CC2D1A-201ENST00000318003 TOP2BQ02880 1626 aa19.51■□□□□ 0.71
CC2D1A-201ENST00000318003 RAB3GAP2Q9H2M9 1393 aa19.5■□□□□ 0.71
CC2D1A-201ENST00000318003 CHIC2Q9UKJ5 165 aa19.49■□□□□ 0.71
CC2D1A-201ENST00000318003 PRXQ9BXM0 1461 aa19.49■□□□□ 0.71
CC2D1A-201ENST00000318003 ANP32CO43423 234 aa19.47■□□□□ 0.71
CC2D1A-201ENST00000318003 CUX1P39880 1505 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms