RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 DCAF8L2P0C7V8 631 aa23.01■■□□□ 1.27
ITSN1-208ENST00000399349 SUPT5HO00267 1087 aaKnown RBP21.95■■□□□ 1.1
ITSN1-208ENST00000399349 EHMT2Q96KQ7 1210 aa21.49■■□□□ 1.03
ITSN1-208ENST00000399349 SHROOM4Q9ULL8 1493 aa21.48■■□□□ 1.03
ITSN1-208ENST00000399349 NISCHQ9Y2I1 1504 aa21.21■□□□□ 0.99
ITSN1-208ENST00000399349 FAM9AQ8IZU1 332 aaPredicted RBP20.79■□□□□ 0.92
ITSN1-208ENST00000399349 TTBK1Q5TCY1 1321 aaPredicted RBP20.75■□□□□ 0.91
ITSN1-208ENST00000399349 APLP2Q06481 763 aa20.66■□□□□ 0.9
ITSN1-208ENST00000399349 PCGF6Q9BYE7 350 aa20.63■□□□□ 0.89
ITSN1-208ENST00000399349 PELP1Q8IZL8 1130 aaKnown RBP20.62■□□□□ 0.89
ITSN1-208ENST00000399349 RANGAP1P46060 587 aaPredicted RBP20.42■□□□□ 0.86
ITSN1-208ENST00000399349 CCER1Q8TC90 406 aaPredicted RBP20.15■□□□□ 0.82
ITSN1-208ENST00000399349 TRIM41Q8WV44 630 aa20.15■□□□□ 0.82
ITSN1-208ENST00000399349 ATP1B4Q9UN42 357 aaPredicted RBP20.11■□□□□ 0.81
ITSN1-208ENST00000399349 CENPBP07199 599 aaPredicted RBP20.06■□□□□ 0.8
ITSN1-208ENST00000399349 UBTFP17480 764 aaKnown RBP19.97■□□□□ 0.79
ITSN1-208ENST00000399349 PPARGC1BQ86YN6 1023 aaKnown RBP19.97■□□□□ 0.79
ITSN1-208ENST00000399349 ERICH6Q7L0X2 663 aa19.94■□□□□ 0.78
ITSN1-208ENST00000399349 ZEB1P37275 1124 aaPredicted RBP19.93■□□□□ 0.78
ITSN1-208ENST00000399349 YTHDC1Q96MU7 727 aaKnown RBP19.93■□□□□ 0.78
ITSN1-208ENST00000399349 HRCP23327 699 aa19.85■□□□□ 0.77
ITSN1-208ENST00000399349 MYT1Q01538 1121 aa19.75■□□□□ 0.75
ITSN1-208ENST00000399349 NEFLP07196 543 aa19.65■□□□□ 0.74
ITSN1-208ENST00000399349 ITGAEP38570 1179 aa19.53■□□□□ 0.72
ITSN1-208ENST00000399349 LOC105371045A0A1W2PR82 267 aa19.51■□□□□ 0.71
ITSN1-208ENST00000399349 TRIM26Q12899 539 aaPredicted RBP19.49■□□□□ 0.71
ITSN1-208ENST00000399349 POLR3GLQ9BT43 218 aa19.39■□□□□ 0.69
ITSN1-208ENST00000399349 CNGB1Q14028 1251 aaPredicted RBP19.38■□□□□ 0.69
ITSN1-208ENST00000399349 HNRNPUL2Q1KMD3 747 aaKnown RBP19.36■□□□□ 0.69
ITSN1-208ENST00000399349 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.31■□□□□ 0.68
ITSN1-208ENST00000399349 CHIC1Q5VXU3 224 aa19.28■□□□□ 0.68
ITSN1-208ENST00000399349 MYT1LQ9UL68 1186 aa19.23■□□□□ 0.67
ITSN1-208ENST00000399349 DAXXQ9UER7 740 aaPredicted RBP19.07■□□□□ 0.64
ITSN1-208ENST00000399349 DIEXFQ68CQ4 756 aaKnown RBP18.97■□□□□ 0.63
ITSN1-208ENST00000399349 SLC4A1APQ9BWU0 796 aaKnown RBP18.92■□□□□ 0.62
ITSN1-208ENST00000399349 FAM50AQ14320 339 aaKnown RBP18.86■□□□□ 0.61
ITSN1-208ENST00000399349 GTF3C3Q9Y5Q9 886 aa18.86■□□□□ 0.61
ITSN1-208ENST00000399349 NEUROD1Q13562 356 aa18.81■□□□□ 0.6
ITSN1-208ENST00000399349 BCANQ96GW7 911 aa18.78■□□□□ 0.6
ITSN1-208ENST00000399349 CLSPNQ9HAW4 1339 aa18.77■□□□□ 0.59
ITSN1-208ENST00000399349 TRIM52Q96A61 297 aa18.75■□□□□ 0.59
ITSN1-208ENST00000399349 PABPN1Q86U42 306 aaKnown RBP eCLIP18.73■□□□□ 0.59
ITSN1-208ENST00000399349 ZNF326Q5BKZ1 582 aaKnown RBP18.67■□□□□ 0.58
ITSN1-208ENST00000399349 RTL5Q5HYW3 569 aaPredicted RBP18.66■□□□□ 0.58
ITSN1-208ENST00000399349 ACIN1Q9UKV3 1341 aaKnown RBP18.65■□□□□ 0.58
ITSN1-208ENST00000399349 ZNF316A6NFI3 1004 aaPredicted RBP18.65■□□□□ 0.58
ITSN1-208ENST00000399349 SCAF1Q9H7N4 1312 aaKnown RBP18.6■□□□□ 0.57
ITSN1-208ENST00000399349 ABCC9O60706 1549 aa18.51■□□□□ 0.55
ITSN1-208ENST00000399349 ANP32CO43423 234 aa18.5■□□□□ 0.55
ITSN1-208ENST00000399349 ARID3CA6NKF2 412 aa18.49■□□□□ 0.55
ITSN1-208ENST00000399349 BCL11AQ9H165 835 aa18.48■□□□□ 0.55
ITSN1-208ENST00000399349 FBLN2P98095 1184 aa18.47■□□□□ 0.55
ITSN1-208ENST00000399349 P3H3Q8IVL6 736 aa18.46■□□□□ 0.55
ITSN1-208ENST00000399349 CDK11AQ9UQ88 783 aaPredicted RBP18.38■□□□□ 0.53
ITSN1-208ENST00000399349 SLC24A1O60721 1099 aa18.3■□□□□ 0.52
ITSN1-208ENST00000399349 CSRNP3Q8WYN3 585 aa18.27■□□□□ 0.52
ITSN1-208ENST00000399349 CANXP27824 592 aaKnown RBP18.26■□□□□ 0.51
ITSN1-208ENST00000399349 ZBTB47Q9UFB7 747 aaPredicted RBP18.25■□□□□ 0.51
ITSN1-208ENST00000399349 ZNF777Q9ULD5 760 aaPredicted RBP18.25■□□□□ 0.51
ITSN1-208ENST00000399349 NPM2Q86SE8 214 aaKnown RBP18.18■□□□□ 0.5
ITSN1-208ENST00000399349 FKBP8Q14318 412 aa18.11■□□□□ 0.49
ITSN1-208ENST00000399349 DDX10Q13206 875 aaKnown RBP18.08■□□□□ 0.49
ITSN1-208ENST00000399349 SALL2Q9Y467 1007 aaPredicted RBP18.08■□□□□ 0.48
ITSN1-208ENST00000399349 NEFMP07197 916 aa18.07■□□□□ 0.48
ITSN1-208ENST00000399349 ANP32AP39687 249 aaKnown RBP18.07■□□□□ 0.48
ITSN1-208ENST00000399349 HNRNPUQ00839 825 aaKnown RBP eCLIP18.05■□□□□ 0.48
ITSN1-208ENST00000399349 DCAF1Q9Y4B6 1507 aa18.05■□□□□ 0.48
ITSN1-208ENST00000399349 FAM9BQ8IZU0 186 aa18.04■□□□□ 0.48
ITSN1-208ENST00000399349 CHGAP10645 457 aaKnown RBP18■□□□□ 0.47
ITSN1-208ENST00000399349 TONSLQ96HA7 1378 aa17.99■□□□□ 0.47
ITSN1-208ENST00000399349 CHIC2Q9UKJ5 165 aa17.97■□□□□ 0.47
ITSN1-208ENST00000399349 PLPPR3Q6T4P5 718 aa17.93■□□□□ 0.46
ITSN1-208ENST00000399349 HIRIP3Q9BW71 556 aaPredicted RBP17.93■□□□□ 0.46
ITSN1-208ENST00000399349 MYO15BQ96JP2 1530 aa17.92■□□□□ 0.46
ITSN1-208ENST00000399349 EIF5BO60841 1220 aaKnown RBP17.87■□□□□ 0.45
ITSN1-208ENST00000399349 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.86■□□□□ 0.451e-6■■■■□ 23.9
ITSN1-208ENST00000399349 IRX6P78412 446 aaPredicted RBP17.85■□□□□ 0.45
ITSN1-208ENST00000399349 HSP90AA1P07900 732 aaKnown RBP17.85■□□□□ 0.45
ITSN1-208ENST00000399349 STAG3Q9UJ98 1225 aa17.83■□□□□ 0.45
ITSN1-208ENST00000399349 TMC1Q8TDI8 760 aa17.82■□□□□ 0.44
ITSN1-208ENST00000399349 KDM2AQ9Y2K7 1162 aa17.82■□□□□ 0.44
ITSN1-208ENST00000399349 MIER1Q8N108 512 aa17.82■□□□□ 0.44
ITSN1-208ENST00000399349 CCDC136Q96JN2 1154 aa17.81■□□□□ 0.44
ITSN1-208ENST00000399349 ESF1Q9H501 851 aaKnown RBP17.81■□□□□ 0.44
ITSN1-208ENST00000399349 NBR1Q14596 966 aa17.81■□□□□ 0.44
ITSN1-208ENST00000399349 ARXQ96QS3 562 aa17.78■□□□□ 0.44
ITSN1-208ENST00000399349 MRS2Q9HD23 443 aa17.78■□□□□ 0.44
ITSN1-208ENST00000399349 SCRIBQ14160 1630 aa17.78■□□□□ 0.44
ITSN1-208ENST00000399349 ANP32EQ9BTT0 268 aa17.76■□□□□ 0.43
ITSN1-208ENST00000399349 SENP3-EIF4A1A0A087X0R7 540 aa17.76■□□□□ 0.43
ITSN1-208ENST00000399349 SENP3Q9H4L4 574 aaPredicted RBP17.76■□□□□ 0.43
ITSN1-208ENST00000399349 UPF2Q9HAU5 1272 aaKnown RBP17.74■□□□□ 0.43
ITSN1-208ENST00000399349 ANP32BQ92688 251 aaKnown RBP17.69■□□□□ 0.42
ITSN1-208ENST00000399349 WDR43Q15061 677 aaKnown RBP eCLIP17.67■□□□□ 0.42
ITSN1-208ENST00000399349 TSPY4P0CV99 314 aa17.66■□□□□ 0.42
ITSN1-208ENST00000399349 TSPY10P0CW01 314 aa17.66■□□□□ 0.42
ITSN1-208ENST00000399349 RRP7BPQ9NSQ0 103 aa17.66■□□□□ 0.42
ITSN1-208ENST00000399349 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.65■□□□□ 0.42
ITSN1-208ENST00000399349 NPM1P06748 294 aaKnown RBP eCLIP17.64■□□□□ 0.41
ITSN1-208ENST00000399349 MTUS2Q5JR59 1369 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms