RNA–Protein interactions for RNA: ENST00000206451.10

PSME1-201, Transcript of proteasome activator subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSME1, Length 1,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-201ENST00000206451 NISCHQ9Y2I1 1504 aa36.4■■■■□ 3.42
PSME1-201ENST00000206451 CCDC180Q9P1Z9 1646 aa32.77■■■□□ 2.84
PSME1-201ENST00000206451 ABCC9O60706 1549 aa32.4■■■□□ 2.78
PSME1-201ENST00000206451 RB1CC1Q8TDY2 1594 aa31■■■□□ 2.55
PSME1-201ENST00000206451 NACADO15069 1562 aa30.83■■■□□ 2.53
PSME1-201ENST00000206451 UNC13AQ9UPW8 1703 aa30.53■■■□□ 2.48
PSME1-201ENST00000206451 MYO15BQ96JP2 1530 aa30.47■■■□□ 2.47
PSME1-201ENST00000206451 DCAF8L2P0C7V8 631 aa30.38■■■□□ 2.45
PSME1-201ENST00000206451 ZCCHC6Q5VYS8 1495 aaKnown RBP30.23■■■□□ 2.43
PSME1-201ENST00000206451 DNAJC5BQ9UF47 199 aa30.22■■■□□ 2.43
PSME1-201ENST00000206451 BICRAQ9NZM4 1560 aa30.15■■■□□ 2.42
PSME1-201ENST00000206451 DCAF1Q9Y4B6 1507 aa30.14■■■□□ 2.42
PSME1-201ENST00000206451 PABPN1Q86U42 306 aaKnown RBP eCLIP30.07■■■□□ 2.44e-6■□□□□ 11
PSME1-201ENST00000206451 SCRIBQ14160 1630 aa29.74■■■□□ 2.35
PSME1-201ENST00000206451 SHROOM4Q9ULL8 1493 aa29.74■■■□□ 2.35
PSME1-201ENST00000206451 CC2D2AQ9P2K1 1620 aa29.39■■■□□ 2.3
PSME1-201ENST00000206451 EIF4G1Q04637 1599 aaKnown RBP29.35■■■□□ 2.29
PSME1-201ENST00000206451 CECR2Q9BXF3 1484 aa29.17■■■□□ 2.26
PSME1-201ENST00000206451 SMARCA4P51532 1647 aa28.43■■■□□ 2.14
PSME1-201ENST00000206451 NCAPD3P42695 1498 aa28.4■■■□□ 2.14
PSME1-201ENST00000206451 ATAD2BQ9ULI0 1458 aa28.33■■■□□ 2.13
PSME1-201ENST00000206451 SMARCA2P51531 1590 aa28.3■■■□□ 2.12
PSME1-201ENST00000206451 HMGXB3Q12766 1538 aa28.28■■■□□ 2.12
PSME1-201ENST00000206451 BAZ1AQ9NRL2 1556 aaPredicted RBP28.26■■■□□ 2.11
PSME1-201ENST00000206451 PEG3Q9GZU2 1588 aa28.19■■■□□ 2.1
PSME1-201ENST00000206451 BAZ1BQ9UIG0 1483 aaKnown RBP28.05■■■□□ 2.08
PSME1-201ENST00000206451 MROH2BQ7Z745 1585 aa28.04■■■□□ 2.08
PSME1-201ENST00000206451 CUX2O14529 1486 aa27.93■■■□□ 2.06
PSME1-201ENST00000206451 ERCC6Q03468 1493 aa27.93■■■□□ 2.06
PSME1-201ENST00000206451 NESP48681 1621 aa27.91■■■□□ 2.06
PSME1-201ENST00000206451 LAMC3Q9Y6N6 1575 aa27.82■■■□□ 2.04
PSME1-201ENST00000206451 WIZO95785 1651 aa27.78■■■□□ 2.04
PSME1-201ENST00000206451 THOC2Q8NI27 1593 aaKnown RBP27.73■■■□□ 2.03
PSME1-201ENST00000206451 KIF21AQ7Z4S6 1674 aa27.72■■■□□ 2.03
PSME1-201ENST00000206451 DNAJC5Q9H3Z4 198 aa27.64■■■□□ 2.02
PSME1-201ENST00000206451 PDS5BQ9NTI5 1447 aa27.52■■■□□ 2
PSME1-201ENST00000206451 CADPSQ9ULU8 1353 aa27.48■■□□□ 1.99
PSME1-201ENST00000206451 RSF1Q96T23 1441 aaPredicted RBP27.46■■□□□ 1.99
PSME1-201ENST00000206451 TOP2AP11388 1531 aaKnown RBP27.41■■□□□ 1.98
PSME1-201ENST00000206451 MRC2Q9UBG0 1479 aa27.32■■□□□ 1.96
PSME1-201ENST00000206451 WDR62O43379 1518 aa27.32■■□□□ 1.96
PSME1-201ENST00000206451 PRDM2Q13029 1718 aa27.29■■□□□ 1.96
PSME1-201ENST00000206451 CFTRP13569 1480 aa27.26■■□□□ 1.95
PSME1-201ENST00000206451 CEP164Q9UPV0 1460 aa27.25■■□□□ 1.95
PSME1-201ENST00000206451 FANCD2Q9BXW9 1451 aa27.21■■□□□ 1.95
PSME1-201ENST00000206451 CCDC88BA6NC98 1476 aa27.03■■□□□ 1.92
PSME1-201ENST00000206451 URB2Q14146 1524 aaKnown RBP27.02■■□□□ 1.92
PSME1-201ENST00000206451 TOPBP1Q92547 1522 aa26.75■■□□□ 1.87
PSME1-201ENST00000206451 DNMBPQ6XZF7 1577 aa26.71■■□□□ 1.87
PSME1-201ENST00000206451 IFT140Q96RY7 1462 aa26.68■■□□□ 1.86
PSME1-201ENST00000206451 ABCC8Q09428 1581 aa26.68■■□□□ 1.86
PSME1-201ENST00000206451 ZNF608Q9ULD9 1512 aaPredicted RBP26.63■■□□□ 1.85
PSME1-201ENST00000206451 EIF4G3O43432 1585 aaKnown RBP26.6■■□□□ 1.85
PSME1-201ENST00000206451 TARBP1Q13395 1621 aaKnown RBP26.58■■□□□ 1.85
PSME1-201ENST00000206451 OSCARQ8IYS5 282 aa26.52■■□□□ 1.84
PSME1-201ENST00000206451 POLA1P09884 1462 aaPredicted RBP26.48■■□□□ 1.83
PSME1-201ENST00000206451 CHD1O14646 1710 aa26.44■■□□□ 1.82
PSME1-201ENST00000206451 TRIM41Q8WV44 630 aa26.4■■□□□ 1.82
PSME1-201ENST00000206451 RIMBP3CA6NJZ7 1639 aa26.38■■□□□ 1.81
PSME1-201ENST00000206451 RIMBP3BA6NNM3 1639 aa26.38■■□□□ 1.81
PSME1-201ENST00000206451 RIMBP3Q9UFD9 1639 aa26.38■■□□□ 1.81
PSME1-201ENST00000206451 AQRO60306 1485 aaKnown RBP eCLIP26.36■■□□□ 1.819e-8■■■■■ 27.5
PSME1-201ENST00000206451 CUX1P39880 1505 aa26.35■■□□□ 1.81
PSME1-201ENST00000206451 WDR97A6NE52 1622 aa26.35■■□□□ 1.81
PSME1-201ENST00000206451 RAD54L2Q9Y4B4 1467 aa26.33■■□□□ 1.81
PSME1-201ENST00000206451 FGD5Q6ZNL6 1462 aa26.32■■□□□ 1.8
PSME1-201ENST00000206451 SOGA1O94964 1423 aa26.28■■□□□ 1.8
PSME1-201ENST00000206451 ARHGEF11O15085 1522 aa26.24■■□□□ 1.79
PSME1-201ENST00000206451 PBRM1Q86U86 1689 aa26.19■■□□□ 1.78
PSME1-201ENST00000206451 SUPT5HO00267 1087 aaKnown RBP26.18■■□□□ 1.78
PSME1-201ENST00000206451 TDRD9Q8NDG6 1382 aaKnown RBP26.18■■□□□ 1.78
PSME1-201ENST00000206451 SNAPC4Q5SXM2 1469 aa26.14■■□□□ 1.78
PSME1-201ENST00000206451 MAGI1Q96QZ7 1491 aaPredicted RBP26.11■■□□□ 1.77
PSME1-201ENST00000206451 ABCA5Q8WWZ7 1642 aa26.09■■□□□ 1.77
PSME1-201ENST00000206451 GRIN2BQ13224 1484 aa26.08■■□□□ 1.77
PSME1-201ENST00000206451 BIVM-ERCC5R4GMW8 1640 aa26.07■■□□□ 1.76
PSME1-201ENST00000206451 CLASP1Q7Z460 1538 aa26.07■■□□□ 1.76
PSME1-201ENST00000206451 ABCA10Q8WWZ4 1543 aa26.05■■□□□ 1.76
PSME1-201ENST00000206451 FBLN2P98095 1184 aa26.03■■□□□ 1.76
PSME1-201ENST00000206451 SYNJ1O43426 1573 aa26.02■■□□□ 1.76
PSME1-201ENST00000206451 TOP2BQ02880 1626 aa26.01■■□□□ 1.75
PSME1-201ENST00000206451 GAPVD1Q14C86 1478 aa26.01■■□□□ 1.75
PSME1-201ENST00000206451 SYNJ2O15056 1496 aa26■■□□□ 1.75
PSME1-201ENST00000206451 ARAP1Q96P48 1450 aa25.99■■□□□ 1.75
PSME1-201ENST00000206451 WRNQ14191 1432 aaPredicted RBP eCLIP25.89■■□□□ 1.74
PSME1-201ENST00000206451 CHMP7Q8WUX9 453 aaPredicted RBP25.89■■□□□ 1.74
PSME1-201ENST00000206451 CYB5RLQ6IPT4 315 aa25.87■■□□□ 1.73
PSME1-201ENST00000206451 ADAMTS12P58397 1594 aa25.86■■□□□ 1.73
PSME1-201ENST00000206451 GRIN2AQ12879 1464 aa25.78■■□□□ 1.72
PSME1-201ENST00000206451 ERICH3Q5RHP9 1530 aa25.75■■□□□ 1.71
PSME1-201ENST00000206451 CEP170Q5SW79 1584 aa25.73■■□□□ 1.71
PSME1-201ENST00000206451 NUP160Q12769 1436 aa25.69■■□□□ 1.7
PSME1-201ENST00000206451 SHROOM2Q13796 1616 aa25.68■■□□□ 1.7
PSME1-201ENST00000206451 FHAD1B1AJZ9 1412 aa25.67■■□□□ 1.7
PSME1-201ENST00000206451 ERCC6L2Q5T890 1561 aa25.64■■□□□ 1.69
PSME1-201ENST00000206451 RUSC2Q8N2Y8 1516 aa25.51■■□□□ 1.67
PSME1-201ENST00000206451 TRHP20396 242 aaPredicted RBP25.5■■□□□ 1.67
PSME1-201ENST00000206451 CUL7Q14999 1698 aa25.46■■□□□ 1.67
PSME1-201ENST00000206451 KIF27Q86VH2 1401 aa25.37■■□□□ 1.65
PSME1-201ENST00000206451 PRG4Q92954 1404 aaPredicted RBP25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms