RNA–Protein interactions for RNA: ENST00000592712.5

LINC01535-206, Transcript of long intergenic non-protein coding RNA 1535, humanhuman

TSL 1 (best) BASIC

Gene LINC01535, Length 1,699 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01535-206ENST00000592712 NISCHQ9Y2I1 1504 aa31.59■■■□□ 2.65
LINC01535-206ENST00000592712 CCDC180Q9P1Z9 1646 aa27.54■■■□□ 2
LINC01535-206ENST00000592712 ZCCHC6Q5VYS8 1495 aaKnown RBP26.52■■□□□ 1.84
LINC01535-206ENST00000592712 DCAF8L2P0C7V8 631 aa26.18■■□□□ 1.78
LINC01535-206ENST00000592712 ABCC9O60706 1549 aa26.16■■□□□ 1.78
LINC01535-206ENST00000592712 DCAF1Q9Y4B6 1507 aa26.12■■□□□ 1.77
LINC01535-206ENST00000592712 MYO15BQ96JP2 1530 aa25.86■■□□□ 1.73
LINC01535-206ENST00000592712 SHROOM4Q9ULL8 1493 aa25.82■■□□□ 1.72
LINC01535-206ENST00000592712 NACADO15069 1562 aa25.71■■□□□ 1.71
LINC01535-206ENST00000592712 RB1CC1Q8TDY2 1594 aa25.53■■□□□ 1.68
LINC01535-206ENST00000592712 SCRIBQ14160 1630 aa25.29■■□□□ 1.64
LINC01535-206ENST00000592712 UNC13AQ9UPW8 1703 aa24.92■■□□□ 1.58
LINC01535-206ENST00000592712 SUPT5HO00267 1087 aaKnown RBP24.91■■□□□ 1.58
LINC01535-206ENST00000592712 BICRAQ9NZM4 1560 aa24.72■■□□□ 1.55
LINC01535-206ENST00000592712 PABPN1Q86U42 306 aaKnown RBP eCLIP24.59■■□□□ 1.53
LINC01535-206ENST00000592712 RSF1Q96T23 1441 aaPredicted RBP24.54■■□□□ 1.52
LINC01535-206ENST00000592712 CECR2Q9BXF3 1484 aa24.54■■□□□ 1.52
LINC01535-206ENST00000592712 MROH2BQ7Z745 1585 aa24.4■■□□□ 1.5
LINC01535-206ENST00000592712 BAZ1AQ9NRL2 1556 aaPredicted RBP24.4■■□□□ 1.5
LINC01535-206ENST00000592712 SMARCA4P51532 1647 aa24.25■■□□□ 1.47
LINC01535-206ENST00000592712 WIZO95785 1651 aa24.17■■□□□ 1.46
LINC01535-206ENST00000592712 EIF4G1Q04637 1599 aaKnown RBP24.01■■□□□ 1.43
LINC01535-206ENST00000592712 PEG3Q9GZU2 1588 aa23.96■■□□□ 1.43
LINC01535-206ENST00000592712 TOP2AP11388 1531 aaKnown RBP23.94■■□□□ 1.42
LINC01535-206ENST00000592712 ATAD2BQ9ULI0 1458 aa23.88■■□□□ 1.41
LINC01535-206ENST00000592712 SMARCA2P51531 1590 aa23.88■■□□□ 1.41
LINC01535-206ENST00000592712 CHIC1Q5VXU3 224 aa23.85■■□□□ 1.41
LINC01535-206ENST00000592712 BAZ1BQ9UIG0 1483 aaKnown RBP23.75■■□□□ 1.39
LINC01535-206ENST00000592712 CCDC88BA6NC98 1476 aa23.73■■□□□ 1.39
LINC01535-206ENST00000592712 NCAPD3P42695 1498 aa23.73■■□□□ 1.39
LINC01535-206ENST00000592712 CC2D2AQ9P2K1 1620 aa23.69■■□□□ 1.38
LINC01535-206ENST00000592712 HMGXB3Q12766 1538 aa23.68■■□□□ 1.38
LINC01535-206ENST00000592712 TRIM41Q8WV44 630 aa23.44■■□□□ 1.34
LINC01535-206ENST00000592712 DNAJC5BQ9UF47 199 aa23.25■■□□□ 1.31
LINC01535-206ENST00000592712 ABCC8Q09428 1581 aa23.2■■□□□ 1.3
LINC01535-206ENST00000592712 CFTRP13569 1480 aa23.16■■□□□ 1.3
LINC01535-206ENST00000592712 WRNQ14191 1432 aaPredicted RBP eCLIP23.11■■□□□ 1.29
LINC01535-206ENST00000592712 CADPSQ9ULU8 1353 aa23.1■■□□□ 1.29
LINC01535-206ENST00000592712 FAM9AQ8IZU1 332 aaPredicted RBP22.99■■□□□ 1.27
LINC01535-206ENST00000592712 PRDM2Q13029 1718 aa22.96■■□□□ 1.27
LINC01535-206ENST00000592712 LAMC3Q9Y6N6 1575 aa22.96■■□□□ 1.27
LINC01535-206ENST00000592712 LOC105371045A0A1W2PR82 267 aa22.94■■□□□ 1.26
LINC01535-206ENST00000592712 SYNJ1O43426 1573 aa22.94■■□□□ 1.26
LINC01535-206ENST00000592712 NESP48681 1621 aa22.89■■□□□ 1.25
LINC01535-206ENST00000592712 TOP2BQ02880 1626 aa22.87■■□□□ 1.25
LINC01535-206ENST00000592712 EEA1Q15075 1411 aa22.82■■□□□ 1.24
LINC01535-206ENST00000592712 BIVM-ERCC5R4GMW8 1640 aa22.82■■□□□ 1.24
LINC01535-206ENST00000592712 FANCD2Q9BXW9 1451 aa22.82■■□□□ 1.24
LINC01535-206ENST00000592712 SOGA1O94964 1423 aa22.82■■□□□ 1.24
LINC01535-206ENST00000592712 CUX1P39880 1505 aa22.81■■□□□ 1.24
LINC01535-206ENST00000592712 PDS5BQ9NTI5 1447 aa22.79■■□□□ 1.24
LINC01535-206ENST00000592712 CSRNP3Q8WYN3 585 aa22.72■■□□□ 1.23
LINC01535-206ENST00000592712 CEP164Q9UPV0 1460 aa22.71■■□□□ 1.23
LINC01535-206ENST00000592712 RUSC2Q8N2Y8 1516 aa22.7■■□□□ 1.22
LINC01535-206ENST00000592712 EHMT2Q96KQ7 1210 aa22.65■■□□□ 1.22
LINC01535-206ENST00000592712 KIF21AQ7Z4S6 1674 aa22.61■■□□□ 1.21
LINC01535-206ENST00000592712 DNMBPQ6XZF7 1577 aa22.59■■□□□ 1.21
LINC01535-206ENST00000592712 FGD5Q6ZNL6 1462 aa22.56■■□□□ 1.2
LINC01535-206ENST00000592712 TOPBP1Q92547 1522 aa22.56■■□□□ 1.2
LINC01535-206ENST00000592712 KIF27Q86VH2 1401 aa22.54■■□□□ 1.2
LINC01535-206ENST00000592712 URB2Q14146 1524 aaKnown RBP22.53■■□□□ 1.2
LINC01535-206ENST00000592712 ERCC6Q03468 1493 aa22.49■■□□□ 1.19
LINC01535-206ENST00000592712 MRC2Q9UBG0 1479 aa22.49■■□□□ 1.19
LINC01535-206ENST00000592712 GOLGA3Q08378 1498 aa22.48■■□□□ 1.19
LINC01535-206ENST00000592712 POLA1P09884 1462 aaPredicted RBP22.46■■□□□ 1.19
LINC01535-206ENST00000592712 KIF21BO75037 1637 aa22.45■■□□□ 1.18
LINC01535-206ENST00000592712 CUX2O14529 1486 aa22.45■■□□□ 1.18
LINC01535-206ENST00000592712 UBTFP17480 764 aaKnown RBP22.45■■□□□ 1.18
LINC01535-206ENST00000592712 TNIKQ9UKE5 1360 aa22.44■■□□□ 1.18
LINC01535-206ENST00000592712 WDR62O43379 1518 aa22.39■■□□□ 1.17
LINC01535-206ENST00000592712 RAD54L2Q9Y4B4 1467 aa22.38■■□□□ 1.17
LINC01535-206ENST00000592712 ABCA10Q8WWZ4 1543 aa22.38■■□□□ 1.17
LINC01535-206ENST00000592712 PRXQ9BXM0 1461 aa22.36■■□□□ 1.17
LINC01535-206ENST00000592712 RAPGEF2Q9Y4G8 1499 aa22.35■■□□□ 1.17
LINC01535-206ENST00000592712 THOC2Q8NI27 1593 aaKnown RBP22.34■■□□□ 1.17
LINC01535-206ENST00000592712 IGF1RP08069 1367 aa22.34■■□□□ 1.17
LINC01535-206ENST00000592712 ERICH3Q5RHP9 1530 aa22.32■■□□□ 1.16
LINC01535-206ENST00000592712 CEP162Q5TB80 1403 aa22.3■■□□□ 1.16
LINC01535-206ENST00000592712 CARMIL1Q5VZK9 1371 aa22.23■■□□□ 1.15
LINC01535-206ENST00000592712 WDR97A6NE52 1622 aa22.22■■□□□ 1.15
LINC01535-206ENST00000592712 TARBP1Q13395 1621 aaKnown RBP22.22■■□□□ 1.15
LINC01535-206ENST00000592712 TDRD9Q8NDG6 1382 aaKnown RBP22.2■■□□□ 1.14
LINC01535-206ENST00000592712 IFT140Q96RY7 1462 aa22.19■■□□□ 1.14
LINC01535-206ENST00000592712 GAPVD1Q14C86 1478 aa22.16■■□□□ 1.14
LINC01535-206ENST00000592712 ABCA5Q8WWZ7 1642 aa22.14■■□□□ 1.13
LINC01535-206ENST00000592712 CLIP1P30622 1438 aa22.13■■□□□ 1.13
LINC01535-206ENST00000592712 CUL7Q14999 1698 aa22.09■■□□□ 1.13
LINC01535-206ENST00000592712 RANGAP1P46060 587 aaPredicted RBP22.04■■□□□ 1.12
LINC01535-206ENST00000592712 AQRO60306 1485 aaKnown RBP eCLIP22.04■■□□□ 1.12
LINC01535-206ENST00000592712 ZNF608Q9ULD9 1512 aaPredicted RBP22.02■■□□□ 1.12
LINC01535-206ENST00000592712 GRIN2BQ13224 1484 aa21.99■■□□□ 1.11
LINC01535-206ENST00000592712 EIF4G3O43432 1585 aaKnown RBP21.96■■□□□ 1.11
LINC01535-206ENST00000592712 TRIM26Q12899 539 aaPredicted RBP21.95■■□□□ 1.1
LINC01535-206ENST00000592712 PBRM1Q86U86 1689 aa21.95■■□□□ 1.1
LINC01535-206ENST00000592712 PCGF6Q9BYE7 350 aa21.94■■□□□ 1.1
LINC01535-206ENST00000592712 FHAD1B1AJZ9 1412 aa21.94■■□□□ 1.1
LINC01535-206ENST00000592712 VPS8Q8N3P4 1428 aa21.93■■□□□ 1.1
LINC01535-206ENST00000592712 ARHGAP35Q9NRY4 1499 aa21.87■■□□□ 1.09
LINC01535-206ENST00000592712 ARAP1Q96P48 1450 aa21.86■■□□□ 1.09
LINC01535-206ENST00000592712 ADAMTS12P58397 1594 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms