RNA–Protein interactions for RNA: ENST00000435883.1

AC003958.1-201, humanhuman

BASIC

Gene AC003958.1, Length 421 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003958.1-201ENST00000435883 NISCHQ9Y2I1 1504 aa28.64■■■□□ 2.18
AC003958.1-201ENST00000435883 ABCC9O60706 1549 aa25.89■■□□□ 1.74
AC003958.1-201ENST00000435883 CCDC180Q9P1Z9 1646 aa25.8■■□□□ 1.72
AC003958.1-201ENST00000435883 RB1CC1Q8TDY2 1594 aa24.56■■□□□ 1.52
AC003958.1-201ENST00000435883 DNAJC5BQ9UF47 199 aa24.45■■□□□ 1.5
AC003958.1-201ENST00000435883 NACADO15069 1562 aa24.37■■□□□ 1.49
AC003958.1-201ENST00000435883 UNC13AQ9UPW8 1703 aa24.13■■□□□ 1.45
AC003958.1-201ENST00000435883 MYO15BQ96JP2 1530 aa24.02■■□□□ 1.44
AC003958.1-201ENST00000435883 PABPN1Q86U42 306 aaKnown RBP eCLIP24.02■■□□□ 1.44
AC003958.1-201ENST00000435883 DCAF8L2P0C7V8 631 aa24■■□□□ 1.43
AC003958.1-201ENST00000435883 BICRAQ9NZM4 1560 aa23.97■■□□□ 1.43
AC003958.1-201ENST00000435883 ZCCHC6Q5VYS8 1495 aaKnown RBP23.75■■□□□ 1.39
AC003958.1-201ENST00000435883 DCAF1Q9Y4B6 1507 aa23.66■■□□□ 1.38
AC003958.1-201ENST00000435883 SHROOM4Q9ULL8 1493 aa23.56■■□□□ 1.36
AC003958.1-201ENST00000435883 SCRIBQ14160 1630 aa23.49■■□□□ 1.35
AC003958.1-201ENST00000435883 CC2D2AQ9P2K1 1620 aa23.42■■□□□ 1.34
AC003958.1-201ENST00000435883 EIF4G1Q04637 1599 aaKnown RBP23.34■■□□□ 1.33
AC003958.1-201ENST00000435883 CECR2Q9BXF3 1484 aa23.33■■□□□ 1.33
AC003958.1-201ENST00000435883 SUPT5HO00267 1087 aaKnown RBP22.65■■□□□ 1.22
AC003958.1-201ENST00000435883 NCAPD3P42695 1498 aa22.51■■□□□ 1.19
AC003958.1-201ENST00000435883 DNAJC5Q9H3Z4 198 aa22.47■■□□□ 1.19
AC003958.1-201ENST00000435883 ATAD2BQ9ULI0 1458 aa22.43■■□□□ 1.18
AC003958.1-201ENST00000435883 SMARCA4P51532 1647 aa22.4■■□□□ 1.18
AC003958.1-201ENST00000435883 CUX2O14529 1486 aa22.37■■□□□ 1.17
AC003958.1-201ENST00000435883 HMGXB3Q12766 1538 aa22.36■■□□□ 1.17
AC003958.1-201ENST00000435883 SMARCA2P51531 1590 aa22.33■■□□□ 1.16
AC003958.1-201ENST00000435883 ERCC6Q03468 1493 aa22.29■■□□□ 1.16
AC003958.1-201ENST00000435883 CHIC1Q5VXU3 224 aa22.29■■□□□ 1.16
AC003958.1-201ENST00000435883 NESP48681 1621 aa22.24■■□□□ 1.15
AC003958.1-201ENST00000435883 BAZ1AQ9NRL2 1556 aaPredicted RBP22.22■■□□□ 1.15
AC003958.1-201ENST00000435883 PEG3Q9GZU2 1588 aa22.21■■□□□ 1.15
AC003958.1-201ENST00000435883 BAZ1BQ9UIG0 1483 aaKnown RBP22.17■■□□□ 1.14
AC003958.1-201ENST00000435883 MROH2BQ7Z745 1585 aa22.1■■□□□ 1.13
AC003958.1-201ENST00000435883 THOC2Q8NI27 1593 aaKnown RBP22.1■■□□□ 1.13
AC003958.1-201ENST00000435883 LAMC3Q9Y6N6 1575 aa22.02■■□□□ 1.12
AC003958.1-201ENST00000435883 KIF21AQ7Z4S6 1674 aa21.97■■□□□ 1.11
AC003958.1-201ENST00000435883 HRCP23327 699 aa21.88■■□□□ 1.09
AC003958.1-201ENST00000435883 WIZO95785 1651 aa21.82■■□□□ 1.08
AC003958.1-201ENST00000435883 PDS5BQ9NTI5 1447 aa21.82■■□□□ 1.08
AC003958.1-201ENST00000435883 CADPSQ9ULU8 1353 aa21.77■■□□□ 1.08
AC003958.1-201ENST00000435883 WDR62O43379 1518 aa21.73■■□□□ 1.07
AC003958.1-201ENST00000435883 MRC2Q9UBG0 1479 aa21.72■■□□□ 1.07
AC003958.1-201ENST00000435883 RSF1Q96T23 1441 aaPredicted RBP21.69■■□□□ 1.06
AC003958.1-201ENST00000435883 CEP164Q9UPV0 1460 aa21.58■■□□□ 1.05
AC003958.1-201ENST00000435883 FANCD2Q9BXW9 1451 aa21.56■■□□□ 1.04
AC003958.1-201ENST00000435883 CFTRP13569 1480 aa21.54■■□□□ 1.04
AC003958.1-201ENST00000435883 PCGF6Q9BYE7 350 aa21.54■■□□□ 1.04
AC003958.1-201ENST00000435883 TOP2AP11388 1531 aaKnown RBP21.53■■□□□ 1.04
AC003958.1-201ENST00000435883 URB2Q14146 1524 aaKnown RBP21.45■■□□□ 1.02
AC003958.1-201ENST00000435883 TRIM26Q12899 539 aaPredicted RBP21.42■■□□□ 1.02
AC003958.1-201ENST00000435883 LOC105371045A0A1W2PR82 267 aa21.37■■□□□ 1.01
AC003958.1-201ENST00000435883 PRDM2Q13029 1718 aa21.36■■□□□ 1.01
AC003958.1-201ENST00000435883 TRIM41Q8WV44 630 aa21.36■■□□□ 1.01
AC003958.1-201ENST00000435883 ZEB1P37275 1124 aaPredicted RBP21.25■□□□□ 0.99
AC003958.1-201ENST00000435883 CCDC88BA6NC98 1476 aa21.25■□□□□ 0.99
AC003958.1-201ENST00000435883 ZNF608Q9ULD9 1512 aaPredicted RBP21.2■□□□□ 0.98
AC003958.1-201ENST00000435883 OSCARQ8IYS5 282 aa21.19■□□□□ 0.98
AC003958.1-201ENST00000435883 TOPBP1Q92547 1522 aa21.16■□□□□ 0.98
AC003958.1-201ENST00000435883 IFT140Q96RY7 1462 aa21.16■□□□□ 0.98
AC003958.1-201ENST00000435883 RIMBP3CA6NJZ7 1639 aa21.11■□□□□ 0.97
AC003958.1-201ENST00000435883 RIMBP3BA6NNM3 1639 aa21.11■□□□□ 0.97
AC003958.1-201ENST00000435883 RIMBP3Q9UFD9 1639 aa21.11■□□□□ 0.97
AC003958.1-201ENST00000435883 EIF4G3O43432 1585 aaKnown RBP21.1■□□□□ 0.97
AC003958.1-201ENST00000435883 DNMBPQ6XZF7 1577 aa21.07■□□□□ 0.96
AC003958.1-201ENST00000435883 TARBP1Q13395 1621 aaKnown RBP21.02■□□□□ 0.96
AC003958.1-201ENST00000435883 ARHGEF11O15085 1522 aa21.01■□□□□ 0.95
AC003958.1-201ENST00000435883 ABCC8Q09428 1581 aa21.01■□□□□ 0.95
AC003958.1-201ENST00000435883 PPARGC1BQ86YN6 1023 aaKnown RBP20.97■□□□□ 0.95
AC003958.1-201ENST00000435883 CHD1O14646 1710 aa20.96■□□□□ 0.95
AC003958.1-201ENST00000435883 POLA1P09884 1462 aaPredicted RBP20.94■□□□□ 0.94
AC003958.1-201ENST00000435883 AQRO60306 1485 aaKnown RBP eCLIP20.93■□□□□ 0.94
AC003958.1-201ENST00000435883 RAD54L2Q9Y4B4 1467 aa20.86■□□□□ 0.93
AC003958.1-201ENST00000435883 ARAP1Q96P48 1450 aa20.82■□□□□ 0.92
AC003958.1-201ENST00000435883 FAM9AQ8IZU1 332 aaPredicted RBP20.82■□□□□ 0.92
AC003958.1-201ENST00000435883 EEA1Q15075 1411 aa20.8■□□□□ 0.92
AC003958.1-201ENST00000435883 FGD5Q6ZNL6 1462 aa20.78■□□□□ 0.92
AC003958.1-201ENST00000435883 CUX1P39880 1505 aa20.77■□□□□ 0.92
AC003958.1-201ENST00000435883 TDRD9Q8NDG6 1382 aaKnown RBP20.76■□□□□ 0.91
AC003958.1-201ENST00000435883 SOGA1O94964 1423 aa20.76■□□□□ 0.91
AC003958.1-201ENST00000435883 WDR97A6NE52 1622 aa20.75■□□□□ 0.91
AC003958.1-201ENST00000435883 SNAPC4Q5SXM2 1469 aa20.75■□□□□ 0.91
AC003958.1-201ENST00000435883 CLASP1Q7Z460 1538 aa20.74■□□□□ 0.91
AC003958.1-201ENST00000435883 WRNQ14191 1432 aaPredicted RBP eCLIP20.74■□□□□ 0.91
AC003958.1-201ENST00000435883 CYB5RLQ6IPT4 315 aa20.73■□□□□ 0.91
AC003958.1-201ENST00000435883 FBLN2P98095 1184 aa20.68■□□□□ 0.9
AC003958.1-201ENST00000435883 MAGI1Q96QZ7 1491 aaPredicted RBP20.66■□□□□ 0.9
AC003958.1-201ENST00000435883 GRIN2BQ13224 1484 aa20.62■□□□□ 0.89
AC003958.1-201ENST00000435883 SYNJ1O43426 1573 aa20.62■□□□□ 0.89
AC003958.1-201ENST00000435883 TNIKQ9UKE5 1360 aa20.61■□□□□ 0.89
AC003958.1-201ENST00000435883 PBRM1Q86U86 1689 aa20.61■□□□□ 0.89
AC003958.1-201ENST00000435883 SYNJ2O15056 1496 aa20.59■□□□□ 0.89
AC003958.1-201ENST00000435883 ABCA5Q8WWZ7 1642 aa20.58■□□□□ 0.89
AC003958.1-201ENST00000435883 ABCA10Q8WWZ4 1543 aa20.53■□□□□ 0.88
AC003958.1-201ENST00000435883 GAPVD1Q14C86 1478 aa20.53■□□□□ 0.88
AC003958.1-201ENST00000435883 CHMP7Q8WUX9 453 aaPredicted RBP20.52■□□□□ 0.88
AC003958.1-201ENST00000435883 CEP162Q5TB80 1403 aa20.52■□□□□ 0.87
AC003958.1-201ENST00000435883 TRHP20396 242 aaPredicted RBP20.49■□□□□ 0.87
AC003958.1-201ENST00000435883 GOLGA3Q08378 1498 aa20.48■□□□□ 0.87
AC003958.1-201ENST00000435883 CSRNP3Q8WYN3 585 aa20.44■□□□□ 0.86
AC003958.1-201ENST00000435883 ADAMTS12P58397 1594 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms