RNA–Protein interactions for RNA: ENST00000640632.1

KCNMA1-287, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 2 BASIC

Gene KCNMA1, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-287ENST00000640632 NISCHQ9Y2I1 1504 aa23.7■■□□□ 1.39
KCNMA1-287ENST00000640632 PELP1Q8IZL8 1130 aaKnown RBP22.48■■□□□ 1.19
KCNMA1-287ENST00000640632 HRCP23327 699 aa22.34■■□□□ 1.17
KCNMA1-287ENST00000640632 MYT1Q01538 1121 aa21.8■■□□□ 1.08
KCNMA1-287ENST00000640632 PPARGC1BQ86YN6 1023 aaKnown RBP21.8■■□□□ 1.08
KCNMA1-287ENST00000640632 PCGF6Q9BYE7 350 aa21.55■■□□□ 1.04
KCNMA1-287ENST00000640632 SCAF1Q9H7N4 1312 aaKnown RBP21.45■■□□□ 1.03
KCNMA1-287ENST00000640632 MYO15BQ96JP2 1530 aa21.15■□□□□ 0.98
KCNMA1-287ENST00000640632 SUPT5HO00267 1087 aaKnown RBP20.89■□□□□ 0.93
KCNMA1-287ENST00000640632 SHROOM4Q9ULL8 1493 aa20.87■□□□□ 0.93
KCNMA1-287ENST00000640632 DCAF1Q9Y4B6 1507 aa20.84■□□□□ 0.93
KCNMA1-287ENST00000640632 CHIC1Q5VXU3 224 aa20.8■□□□□ 0.92
KCNMA1-287ENST00000640632 ZEB1P37275 1124 aaPredicted RBP20.77■□□□□ 0.92
KCNMA1-287ENST00000640632 ACIN1Q9UKV3 1341 aaKnown RBP20.75■□□□□ 0.91
KCNMA1-287ENST00000640632 TRIM26Q12899 539 aaPredicted RBP20.72■□□□□ 0.91
KCNMA1-287ENST00000640632 CCDC180Q9P1Z9 1646 aa20.69■□□□□ 0.9
KCNMA1-287ENST00000640632 NEUROD1Q13562 356 aa20.65■□□□□ 0.9
KCNMA1-287ENST00000640632 TTBK1Q5TCY1 1321 aaPredicted RBP20.65■□□□□ 0.9
KCNMA1-287ENST00000640632 DCAF8L2P0C7V8 631 aa20.61■□□□□ 0.89
KCNMA1-287ENST00000640632 GTF3C3Q9Y5Q9 886 aa20.6■□□□□ 0.89
KCNMA1-287ENST00000640632 CENPBP07199 599 aaPredicted RBP20.4■□□□□ 0.86
KCNMA1-287ENST00000640632 LOC105371045A0A1W2PR82 267 aa20.36■□□□□ 0.85
KCNMA1-287ENST00000640632 BCL11AQ9H165 835 aa20.28■□□□□ 0.84
KCNMA1-287ENST00000640632 FAM9AQ8IZU1 332 aaPredicted RBP20.11■□□□□ 0.81
KCNMA1-287ENST00000640632 DIEXFQ68CQ4 756 aaKnown RBP20.06■□□□□ 0.8
KCNMA1-287ENST00000640632 ZCCHC6Q5VYS8 1495 aaKnown RBP19.94■□□□□ 0.78
KCNMA1-287ENST00000640632 PRKCSHP14314 528 aaPredicted RBP19.93■□□□□ 0.78
KCNMA1-287ENST00000640632 ANP32EQ9BTT0 268 aa19.91■□□□□ 0.78
KCNMA1-287ENST00000640632 YTHDC1Q96MU7 727 aaKnown RBP19.77■□□□□ 0.76
KCNMA1-287ENST00000640632 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.75■□□□□ 0.75
KCNMA1-287ENST00000640632 CCER1Q8TC90 406 aaPredicted RBP19.74■□□□□ 0.75
KCNMA1-287ENST00000640632 TRIM41Q8WV44 630 aa19.7■□□□□ 0.74
KCNMA1-287ENST00000640632 CSRNP3Q8WYN3 585 aa19.7■□□□□ 0.74
KCNMA1-287ENST00000640632 TSHZ2Q9NRE2 1034 aa19.56■□□□□ 0.72
KCNMA1-287ENST00000640632 ZNF316A6NFI3 1004 aaPredicted RBP19.53■□□□□ 0.72
KCNMA1-287ENST00000640632 ERICH6Q7L0X2 663 aa19.49■□□□□ 0.71
KCNMA1-287ENST00000640632 MIER1Q8N108 512 aa19.48■□□□□ 0.71
KCNMA1-287ENST00000640632 SUPT16HQ9Y5B9 1047 aaKnown RBP19.47■□□□□ 0.71
KCNMA1-287ENST00000640632 CLSPNQ9HAW4 1339 aa19.45■□□□□ 0.7
KCNMA1-287ENST00000640632 ABCC9O60706 1549 aa19.4■□□□□ 0.7
KCNMA1-287ENST00000640632 APLP2Q06481 763 aa19.29■□□□□ 0.68
KCNMA1-287ENST00000640632 SCRIBQ14160 1630 aa19.24■□□□□ 0.67
KCNMA1-287ENST00000640632 EHMT2Q96KQ7 1210 aa19.23■□□□□ 0.67
KCNMA1-287ENST00000640632 RBM19Q9Y4C8 960 aaKnown RBP19.03■□□□□ 0.64
KCNMA1-287ENST00000640632 ANO8Q9HCE9 1232 aaPredicted RBP18.95■□□□□ 0.62
KCNMA1-287ENST00000640632 BCANQ96GW7 911 aa18.93■□□□□ 0.62
KCNMA1-287ENST00000640632 MSH5O43196 834 aa18.92■□□□□ 0.62
KCNMA1-287ENST00000640632 CECR2Q9BXF3 1484 aa18.84■□□□□ 0.61
KCNMA1-287ENST00000640632 RSF1Q96T23 1441 aaPredicted RBP18.83■□□□□ 0.6
KCNMA1-287ENST00000640632 MYT1LQ9UL68 1186 aa18.82■□□□□ 0.6
KCNMA1-287ENST00000640632 FKBP8Q14318 412 aa18.81■□□□□ 0.6
KCNMA1-287ENST00000640632 WRNQ14191 1432 aaPredicted RBP eCLIP18.8■□□□□ 0.6
KCNMA1-287ENST00000640632 DEKP35659 375 aaKnown RBP18.77■□□□□ 0.6
KCNMA1-287ENST00000640632 PABPN1Q86U42 306 aaKnown RBP eCLIP18.73■□□□□ 0.59
KCNMA1-287ENST00000640632 FANCIQ9NVI1 1328 aa18.73■□□□□ 0.59
KCNMA1-287ENST00000640632 RB1CC1Q8TDY2 1594 aa18.7■□□□□ 0.58
KCNMA1-287ENST00000640632 SALL2Q9Y467 1007 aaPredicted RBP18.69■□□□□ 0.58
KCNMA1-287ENST00000640632 ITGAEP38570 1179 aa18.65■□□□□ 0.58
KCNMA1-287ENST00000640632 ERICH6BQ5W0A0 696 aa18.64■□□□□ 0.57
KCNMA1-287ENST00000640632 NEFLP07196 543 aa18.63■□□□□ 0.57
KCNMA1-287ENST00000640632 MROH2BQ7Z745 1585 aa18.63■□□□□ 0.57
KCNMA1-287ENST00000640632 UBE2Q2Q8WVN8 375 aa18.62■□□□□ 0.57
KCNMA1-287ENST00000640632 HNRNPUL2Q1KMD3 747 aaKnown RBP18.6■□□□□ 0.57
KCNMA1-287ENST00000640632 KCNH8Q96L42 1107 aa18.59■□□□□ 0.57
KCNMA1-287ENST00000640632 CCDC136Q96JN2 1154 aa18.58■□□□□ 0.56
KCNMA1-287ENST00000640632 NACADO15069 1562 aa18.56■□□□□ 0.56
KCNMA1-287ENST00000640632 CEP162Q5TB80 1403 aa18.56■□□□□ 0.56
KCNMA1-287ENST00000640632 WIZO95785 1651 aa18.54■□□□□ 0.56
KCNMA1-287ENST00000640632 CDK11AQ9UQ88 783 aaPredicted RBP18.45■□□□□ 0.54
KCNMA1-287ENST00000640632 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.38■□□□□ 0.53
KCNMA1-287ENST00000640632 TNIKQ9UKE5 1360 aa18.38■□□□□ 0.53
KCNMA1-287ENST00000640632 NBR1Q14596 966 aa18.37■□□□□ 0.53
KCNMA1-287ENST00000640632 IL27Q8NEV9 243 aa18.36■□□□□ 0.53
KCNMA1-287ENST00000640632 RTN4Q9NQC3 1192 aaKnown RBP18.31■□□□□ 0.52
KCNMA1-287ENST00000640632 DHX57Q6P158 1386 aaKnown RBP18.31■□□□□ 0.52
KCNMA1-287ENST00000640632 NOP58Q9Y2X3 529 aaKnown RBP18.3■□□□□ 0.52
KCNMA1-287ENST00000640632 TRIM52Q96A61 297 aa18.29■□□□□ 0.52
KCNMA1-287ENST00000640632 UNC13AQ9UPW8 1703 aa18.28■□□□□ 0.52
KCNMA1-287ENST00000640632 PAK3O75914 559 aaPredicted RBP18.22■□□□□ 0.51
KCNMA1-287ENST00000640632 RTL5Q5HYW3 569 aaPredicted RBP18.21■□□□□ 0.51
KCNMA1-287ENST00000640632 ABCC8Q09428 1581 aa18.2■□□□□ 0.5
KCNMA1-287ENST00000640632 UBTFP17480 764 aaKnown RBP18.2■□□□□ 0.5
KCNMA1-287ENST00000640632 EIF5BO60841 1220 aaKnown RBP18.16■□□□□ 0.5
KCNMA1-287ENST00000640632 IRX6P78412 446 aaPredicted RBP18.16■□□□□ 0.5
KCNMA1-287ENST00000640632 DDX10Q13206 875 aaKnown RBP18.16■□□□□ 0.5
KCNMA1-287ENST00000640632 BAZ1AQ9NRL2 1556 aaPredicted RBP18.14■□□□□ 0.5
KCNMA1-287ENST00000640632 PKNOX2Q96KN3 472 aa18.14■□□□□ 0.5
KCNMA1-287ENST00000640632 EIF4G1Q04637 1599 aaKnown RBP18.14■□□□□ 0.49
KCNMA1-287ENST00000640632 CCER2I3L3R5 266 aa18.13■□□□□ 0.49
KCNMA1-287ENST00000640632 CCDC88BA6NC98 1476 aa18.11■□□□□ 0.49
KCNMA1-287ENST00000640632 SMARCA4P51532 1647 aa18.09■□□□□ 0.49
KCNMA1-287ENST00000640632 SOGA1O94964 1423 aa18.09■□□□□ 0.49
KCNMA1-287ENST00000640632 RANGAP1P46060 587 aaPredicted RBP18.08■□□□□ 0.48
KCNMA1-287ENST00000640632 PPP4R2Q9NY27 417 aa18.08■□□□□ 0.48
KCNMA1-287ENST00000640632 BICRAQ9NZM4 1560 aa18.07■□□□□ 0.48
KCNMA1-287ENST00000640632 PPP1R15AO75807 674 aaPredicted RBP18.05■□□□□ 0.48
KCNMA1-287ENST00000640632 GOLGA3Q08378 1498 aa18.04■□□□□ 0.48
KCNMA1-287ENST00000640632 ANP32CO43423 234 aa18.03■□□□□ 0.48
KCNMA1-287ENST00000640632 EEA1Q15075 1411 aa18.02■□□□□ 0.48
KCNMA1-287ENST00000640632 WASHC2AQ641Q2 1341 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms