RNA–Protein interactions for RNA: ENST00000588735.2

GFAP-214, Transcript of glial fibrillary acidic protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GFAP, Length 6,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-214ENST00000588735 DCAF8L2P0C7V8 631 aa21.7■■□□□ 1.06
GFAP-214ENST00000588735 PELP1Q8IZL8 1130 aaKnown RBP20.93■□□□□ 0.94
GFAP-214ENST00000588735 EHMT2Q96KQ7 1210 aa20.61■□□□□ 0.89
GFAP-214ENST00000588735 ERICH6Q7L0X2 663 aa20.43■□□□□ 0.86
GFAP-214ENST00000588735 SUPT5HO00267 1087 aaKnown RBP20.36■□□□□ 0.85
GFAP-214ENST00000588735 CCER1Q8TC90 406 aaPredicted RBP20.01■□□□□ 0.79
GFAP-214ENST00000588735 APLP2Q06481 763 aa20■□□□□ 0.79
GFAP-214ENST00000588735 TTBK1Q5TCY1 1321 aaPredicted RBP19.93■□□□□ 0.78
GFAP-214ENST00000588735 MYT1Q01538 1121 aa19.92■□□□□ 0.78
GFAP-214ENST00000588735 SHROOM4Q9ULL8 1493 aa19.79■□□□□ 0.76
GFAP-214ENST00000588735 FAM9AQ8IZU1 332 aaPredicted RBP19.73■□□□□ 0.75
GFAP-214ENST00000588735 PCGF6Q9BYE7 350 aa19.69■□□□□ 0.74
GFAP-214ENST00000588735 CENPBP07199 599 aaPredicted RBP19.56■□□□□ 0.72
GFAP-214ENST00000588735 RANGAP1P46060 587 aaPredicted RBP19.55■□□□□ 0.72
GFAP-214ENST00000588735 ATP1B4Q9UN42 357 aaPredicted RBP19.47■□□□□ 0.71
GFAP-214ENST00000588735 NEFLP07196 543 aa19.46■□□□□ 0.71
GFAP-214ENST00000588735 YTHDC1Q96MU7 727 aaKnown RBP19.41■□□□□ 0.7
GFAP-214ENST00000588735 DAXXQ9UER7 740 aaPredicted RBP19.34■□□□□ 0.69
GFAP-214ENST00000588735 ZEB1P37275 1124 aaPredicted RBP19.1■□□□□ 0.65
GFAP-214ENST00000588735 POLR3GLQ9BT43 218 aa19.04■□□□□ 0.64
GFAP-214ENST00000588735 MYT1LQ9UL68 1186 aa18.97■□□□□ 0.63
GFAP-214ENST00000588735 CNGB1Q14028 1251 aaPredicted RBP18.95■□□□□ 0.62
GFAP-214ENST00000588735 NISCHQ9Y2I1 1504 aa18.91■□□□□ 0.62
GFAP-214ENST00000588735 CHIC1Q5VXU3 224 aa18.89■□□□□ 0.61
GFAP-214ENST00000588735 ZNF316A6NFI3 1004 aaPredicted RBP18.84■□□□□ 0.61
GFAP-214ENST00000588735 SLC4A1APQ9BWU0 796 aaKnown RBP18.82■□□□□ 0.6
GFAP-214ENST00000588735 PPARGC1BQ86YN6 1023 aaKnown RBP18.76■□□□□ 0.59
GFAP-214ENST00000588735 UBTFP17480 764 aaKnown RBP18.76■□□□□ 0.59
GFAP-214ENST00000588735 CLSPNQ9HAW4 1339 aa18.75■□□□□ 0.59
GFAP-214ENST00000588735 RTL5Q5HYW3 569 aaPredicted RBP18.72■□□□□ 0.59
GFAP-214ENST00000588735 HRCP23327 699 aa18.7■□□□□ 0.58
GFAP-214ENST00000588735 TRIM41Q8WV44 630 aa18.63■□□□□ 0.57
GFAP-214ENST00000588735 ITGAEP38570 1179 aa18.58■□□□□ 0.57
GFAP-214ENST00000588735 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.58■□□□□ 0.56
GFAP-214ENST00000588735 HNRNPUL2Q1KMD3 747 aaKnown RBP18.58■□□□□ 0.56
GFAP-214ENST00000588735 TRIM26Q12899 539 aaPredicted RBP18.49■□□□□ 0.55
GFAP-214ENST00000588735 BCL11AQ9H165 835 aa18.48■□□□□ 0.55
GFAP-214ENST00000588735 SLC24A1O60721 1099 aa18.38■□□□□ 0.53
GFAP-214ENST00000588735 ZBTB47Q9UFB7 747 aaPredicted RBP18.31■□□□□ 0.52
GFAP-214ENST00000588735 LOC105371045A0A1W2PR82 267 aa18.23■□□□□ 0.51
GFAP-214ENST00000588735 GTF3C3Q9Y5Q9 886 aa18.2■□□□□ 0.5
GFAP-214ENST00000588735 DIEXFQ68CQ4 756 aaKnown RBP18.2■□□□□ 0.5
GFAP-214ENST00000588735 BCANQ96GW7 911 aa18.19■□□□□ 0.5
GFAP-214ENST00000588735 CANXP27824 592 aaKnown RBP18.06■□□□□ 0.48
GFAP-214ENST00000588735 EIF5BO60841 1220 aaKnown RBP18.06■□□□□ 0.48
GFAP-214ENST00000588735 CDK11AQ9UQ88 783 aaPredicted RBP17.96■□□□□ 0.46
GFAP-214ENST00000588735 ZNF326Q5BKZ1 582 aaKnown RBP17.92■□□□□ 0.46
GFAP-214ENST00000588735 TRIM52Q96A61 297 aa17.92■□□□□ 0.46
GFAP-214ENST00000588735 NPM2Q86SE8 214 aaKnown RBP17.89■□□□□ 0.45
GFAP-214ENST00000588735 ANP32BQ92688 251 aaKnown RBP17.86■□□□□ 0.45
GFAP-214ENST00000588735 NEUROD1Q13562 356 aa17.86■□□□□ 0.45
GFAP-214ENST00000588735 FAM50AQ14320 339 aaKnown RBP17.84■□□□□ 0.45
GFAP-214ENST00000588735 NEFMP07197 916 aa17.82■□□□□ 0.44
GFAP-214ENST00000588735 ACIN1Q9UKV3 1341 aaKnown RBP17.78■□□□□ 0.44
GFAP-214ENST00000588735 HSP90AA1P07900 732 aaKnown RBP17.77■□□□□ 0.44
GFAP-214ENST00000588735 ANP32AP39687 249 aaKnown RBP17.74■□□□□ 0.43
GFAP-214ENST00000588735 CDK11BP21127 795 aaKnown RBP17.71■□□□□ 0.43
GFAP-214ENST00000588735 ARXQ96QS3 562 aa17.71■□□□□ 0.43
GFAP-214ENST00000588735 ANP32CO43423 234 aa17.7■□□□□ 0.42
GFAP-214ENST00000588735 GLIPR1L2Q4G1C9 344 aa17.7■□□□□ 0.42
GFAP-214ENST00000588735 PLPPR3Q6T4P5 718 aa17.61■□□□□ 0.41
GFAP-214ENST00000588735 TULP1O00294 542 aaPredicted RBP17.53■□□□□ 0.4
GFAP-214ENST00000588735 A0A0G2JS52 829 aa17.49■□□□□ 0.39
GFAP-214ENST00000588735 UPF2Q9HAU5 1272 aaKnown RBP17.48■□□□□ 0.39
GFAP-214ENST00000588735 FKBP8Q14318 412 aa17.45■□□□□ 0.38
GFAP-214ENST00000588735 NBR1Q14596 966 aa17.45■□□□□ 0.38
GFAP-214ENST00000588735 SCAF1Q9H7N4 1312 aaKnown RBP17.42■□□□□ 0.38
GFAP-214ENST00000588735 FBLN2P98095 1184 aa17.39■□□□□ 0.37
GFAP-214ENST00000588735 SALL2Q9Y467 1007 aaPredicted RBP17.35■□□□□ 0.37
GFAP-214ENST00000588735 NCBP3Q53F19 620 aaKnown RBP17.35■□□□□ 0.37
GFAP-214ENST00000588735 ARID3CA6NKF2 412 aa17.34■□□□□ 0.37
GFAP-214ENST00000588735 ESF1Q9H501 851 aaKnown RBP17.33■□□□□ 0.36
GFAP-214ENST00000588735 STAG3Q9UJ98 1225 aa17.32■□□□□ 0.36
GFAP-214ENST00000588735 CHGAP10645 457 aaKnown RBP17.31■□□□□ 0.36
GFAP-214ENST00000588735 PLEKHG5O94827 1062 aa17.29■□□□□ 0.36
GFAP-214ENST00000588735 TPRNQ4KMQ1 711 aa17.29■□□□□ 0.36
GFAP-214ENST00000588735 ZBTB7CA1YPR0 619 aa17.24■□□□□ 0.35
GFAP-214ENST00000588735 ZNF777Q9ULD5 760 aaPredicted RBP17.23■□□□□ 0.35
GFAP-214ENST00000588735 TNNT2P45379 298 aaPredicted RBP17.19■□□□□ 0.34
GFAP-214ENST00000588735 FAM9BQ8IZU0 186 aa17.17■□□□□ 0.34
GFAP-214ENST00000588735 TAOK2Q9UL54 1235 aa17.17■□□□□ 0.34
GFAP-214ENST00000588735 AMER1Q5JTC6 1135 aaPredicted RBP17.17■□□□□ 0.34
GFAP-214ENST00000588735 NCLP19338 710 aaKnown RBP17.16■□□□□ 0.34
GFAP-214ENST00000588735 TRIM44Q96DX7 344 aaPredicted RBP17.16■□□□□ 0.34
GFAP-214ENST00000588735 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.14■□□□□ 0.33
GFAP-214ENST00000588735 HNRNPUQ00839 825 aaKnown RBP eCLIP17.14■□□□□ 0.33
GFAP-214ENST00000588735 DNTTIP2Q5QJE6 756 aaKnown RBP17.12■□□□□ 0.33
GFAP-214ENST00000588735 PTMAP06454 111 aaKnown RBP17.12■□□□□ 0.33
GFAP-214ENST00000588735 IRX6P78412 446 aaPredicted RBP17.12■□□□□ 0.33
GFAP-214ENST00000588735 ZRSR1Q15695 479 aaKnown RBP17.11■□□□□ 0.33
GFAP-214ENST00000588735 MYH16Q9H6N6 1097 aa17.11■□□□□ 0.33
GFAP-214ENST00000588735 CCDC136Q96JN2 1154 aa17.09■□□□□ 0.33
GFAP-214ENST00000588735 P3H3Q8IVL6 736 aa17.08■□□□□ 0.32
GFAP-214ENST00000588735 SENP3Q9H4L4 574 aaPredicted RBP17.08■□□□□ 0.32
GFAP-214ENST00000588735 DDX10Q13206 875 aaKnown RBP17.07■□□□□ 0.32
GFAP-214ENST00000588735 C14orf37Q86TY3 774 aa17.05■□□□□ 0.32
GFAP-214ENST00000588735 CLSTN1O94985 981 aa17.03■□□□□ 0.32
GFAP-214ENST00000588735 ANP32EQ9BTT0 268 aa17.02■□□□□ 0.32
GFAP-214ENST00000588735 WDR43Q15061 677 aaKnown RBP eCLIP17.02■□□□□ 0.31
GFAP-214ENST00000588735 MIER1Q8N108 512 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 203.5 ms